Ctenopharyngodon idella (grass carp): 127499426
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Entry
127499426 CDS
T08802
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127499426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127499426
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127499426
mRNA degradation factors
5'-3' decay
Decapping complex
127499426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EDC4L
WD40_Prp19
Pdc1_Ge1
WDR55
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
127499426
NCBI-ProteinID:
XP_051725680
LinkDB
All DBs
Position
18:21593518..21621808
Genome browser
AA seq
1396 aa
AA seq
DB search
MASNSNMDIEGATQHLRDILKLDRPGNSAETSLVESQRNLSFNGELNGVLGADIIGAGGH
AAMVEPTSHNSDKLNGQDTQTICLSGDDESTCVSIRANNVEIVSSRDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLQLGSTERSLLKGFTGAV
TDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSNKIQDEVVVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSSVLPSLKASLDLSAEF
LILSDVQRKVLYVMELLQNQEKGRASFTAVSEFLLTYPVLSFGVQDVARARLRHTEVLPP
DEESESMTTEGTQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQGASSSLFMPQSGSQD
GFGFSDPLADLNVEAMSSDKESGDSGSQNDLSKILPLPSPADFMSPAPSALPKLMTPDAF
MTPSTSMPASPGSSASSLTIVTAMSSSDSGARGGDDLAQSPKMSVECGNSSLTLSANAGS
PRSNSILISGLGENIQVLMDMVSSPNPPLSLDLQSIEPMVVPQASPTRARSPDVISSAST
AMSQDIPEIASETLQRGLASAAADSVPVLHSDSMASAASVLHLLSPRARSSAEHSLLPLE
LGAASVDGEQRLNNTPSLLETALSQENAVAAGGSCSDSSVNHAWPAAPDITRETRNSLRD
NGLGDCSREEIKDRHISSPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGPRS
SHRLPVKDWKTSPRSSPKLKRKSKKDEGESSQSRQLENQMSTEVQDELLQMLRSQQRELA
ELRQNQLDLLQRVTSHMDAIQSSIMAHIEHSMLAQQEQEQRRMERILAEGQSRNQQLQDQ
LVQQLVQTLNNSLCNRLDKVLREEMKKIVPQSISKSLEPITGQMSSTIAAKLTAVEGALK
ENVTKVVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQSIVLPVFERGCQSMFQQINDSFK
QGTHEYIQQLETHIKNRKQRDQDARDPVIGQLQQMIDTLQNSQDQLATTVTTSVCSDVQH
QLHMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSTHLDYQ
AQQASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFSQQPCPLHQAVLLSLI
QQLSTNLSSRTELKISYLEDAVMNLDHGDPVTRDHMSAVLTQVRQKLFHFLQQDAHSPLS
KRARRLMMMLQGLVNH
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaattccaatatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagacctctttggtggagagccagagaaatcta
tctttcaatggagagttgaatggagttcttggagcggatattatcggagcaggaggacat
gcagcaatggtggagccgacttctcacaactctgacaaacttaatggacaggacacacag
accatctgcctttcaggagatgatgagtccacctgtgtctccatcagagcaaacaatgtg
gaaattgtgtccagccgtgactctagtattgacagtaaagctcgtggtagcaacaaggtt
aaaattcagccagtggccaaatatgactgggagcataagtactactatggcaatttaata
gccgtgtccaactcatacttggcttatgccatcagaggtgcaaacaatcattctatgatc
cgtgtgctgcaactgggctcgacggagcgttcgctgctgaagggcttcaccggagcagtc
acagaccttgccttcgcccacttggactccaccctcttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcactagtcacagcaacaaaatacaagatgaagtggtcgtt
cacatccgtaggcctgaggacactccacttaattccaaccgcagactcatctggtgtccc
ttcatcccagaagacaatgatgagaacccggaggatgcgtgtcagacattggcactgctt
catgaagacagagctgaggtttgggaccttgacattctccgatccaataacagctcatgg
cctgtggatgccactgaactgaaagagggattcatcaccattagaggacacacagcacgc
attagtgagggagcgctgtcccctgatggcactgtcttggccacagccagtcatgatgga
tatgtcaaattttggcaaatctacattgaaggacaggaccaacccagatgtttgcatgaa
tggcagccacataatggacgtccactttcctgcctgctcttttgtgacaatcacaagaag
caagacccagaagttccgttttggcgcttcctgatcactggagctgatcagaaccaggag
ctgaagatgtggtgcacagtgtcatggacctgcttacaaaccatcaggttttctccagat
ccatttaacagcagtgtgctacccagcctgaaggccagtttggacctgtctgcagagttt
cttattcttagtgatgttcagaggaaggtgttgtatgtcatggagctgctacagaaccag
gaaaaaggccgtgccagcttcactgcagtttcagagtttttgcttacatatcctgtgctc
agcttcggtgtacaggatgttgcccgcgcccgactgcgccacactgaggtccttccccct
gatgaagaaagtgaaagcatgacaacagaaggaacccagggaccctcagagtccaaatca
ggaatccagattaaactctactgtgtgcatacaaaatcactacaggatgtgcagatctgg
ttccagcccaatcagggggcctcatcctcccttttcatgcctcagtctggatcccaggat
ggctttggtttttctgacccgctggccgatctgaatgtggaggcaatgagctctgataaa
gagtctggtgacagtggatcacagaatgacttgagtaaaattctgcctcttccaagtcca
gctgacttcatgagtccagccccatcagccttgcccaaactcatgaccccggacgccttt
atgacgcccagcacctctatgcccgcctctcctggcagcagtgcgagcagcctgaccata
gtcacggccatgagcagctcagacagcggtgcaaggggcggagatgatctggcccagagc
cctaagatgtctgtcgaatgtggcaacagcagcttgactctgagtgccaatgcaggcagt
ccaagatccaattccattctcatctcaggccttggggaaaacatccaggtattaatggac
atggtttcctctccaaatcctcctctctccctggatctccagtccatagagcccatggtt
gtccctcaagcctctccgaccagagctcgctctccggatgtcatttcctctgcttctacg
gcaatgtcccaggacattcccgagatcgcctcggagaccctgcagaggggactggccagt
gccgctgctgattcagtccccgtcctgcattctgacagcatggcgtcagccgcatcggtc
ctccacctgctgtctccgagagcccggagcagtgctgagcacagtttgctgcctctcgaa
ttgggtgcagcatctgtggatggagaacagagactcaataacacaccctccctactggag
acggctctgtcacaggagaatgctgtagcagctgggggttcttgttctgacagcagtgtg
aaccatgcatggccggcagcacccgatatcacacgagagactcgcaacagcctgagagac
aatggtttgggagactgctctagggaggaaataaaggacaggcacatttcttctccctac
cacagacgcacctatcacctgactcagaacgacagtcaagatgcaagtgcagagcagagt
gatcatgatgatgaggttgccagtctcgcctcctcctcggggaactgtggcccccgctcc
tcgcacagacttcctgttaaggactggaaaacatcaccccgcagctcccctaagctcaag
aggaagagcaagaaagatgaaggagagtcctcccagtctagacagcttgagaaccagatg
agcacagaggtgcaggatgagctcctgcagatgttgcggagccagcagagggagttagca
gagctgagacagaaccagctggaccttctgcagagagttacgagccacatggatgccata
caaagctccatcatggctcacattgagcactccatgttggctcagcaggagcaagaacag
agaagaatggagcgaattctggctgagggacaaagccggaaccaacagctccaggaccag
ctggttcagcagcttgtccagactctgaacaatagtctgtgcaaccggcttgacaaagtt
ttgcgtgaagaaatgaagaagatcgtcccacagtccatatcgaagagtctagaacctatt
accggccagatgagcagcaccatcgctgccaagttaaccgcagtggaaggagcactgaag
gaaaatgtcaccaaagttgttaagtccaagaacactacagatgccattggtcgtgctgct
gccgaggccatgcagggccccattcaggcagcatacaaagagaccttccaaagcattgtg
cttcccgtgtttgagagaggctgccagtccatgtttcagcaaatcaatgacagcttcaaa
caaggaacccatgagtacatccaacagctggagacacacatcaagaacaggaaacagcgg
gaccaggatgcacgggatcccgtgattggccagctgcaacagatgattgacacgctccag
aattctcaagaccagctggccaccactgtgacgaccagcgtgtgctctgacgttcagcat
cagctccacatgattgtgggaaatctgcaagactcaatcctgacgcaggtgcaacgcata
gtgaagggagaagtgagtctggccatgaaggagcagcaggcagccgtcacttccagcatc
atgcaggccatgcgctcggctgcaggaacgcccgtcccctccacacatctggactaccag
gcccagcaggccagcatactgcagttactacagcagggccagctcaatgaggccttccaa
caggctttatccgcagcagacctgaatctggtgctgtacgtgtgcgagaccattgactct
cagcaagtgttcagccagcagccctgtccactccatcaggccgtcctcctgtctctcatc
caacagctctccaccaacctgagctcacgcacagaactcaagatcagctatctagaagat
gctgtgatgaacctggaccatggagatccagtcaccagagaccacatgtctgcagtgctg
acccaggtacgacagaagctcttccacttcctgcagcaggacgcccacagccctctgagt
aagcgtgcacggcgcctcatgatgatgctgcagggcctggtcaatcactag
DBGET
integrated database retrieval system
