Ctenopharyngodon idella (grass carp): 127499544
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Entry
127499544 CDS
T08802
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba
KO
K06842
semaphorin 6
Organism
cide
Ctenopharyngodon idella (grass carp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127499544
NCBI-ProteinID:
XP_051725892
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All DBs
Position
2:37770371..37915843
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AA seq
872 aa
AA seq
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MATLTPCFLRIFAVLQLAACSFPEEPGPLISAPAEVVRRYPVFVGRAHRSYTRQEPLYIQ
TVLKVNRTLYIGARDDLYRVELDHVSGDEMFYSKKRTWESNKNDIRICRMKGKHEEECRN
YIKVLLSHDGGLFVCGTNAFNPLCANYTRDTLELVGEPISGMARCPYDPKHANVALFAEG
SLFTGTVTDFLAIDAVIYRSLGESPALRTIKHDSKWFREPYFVSAVEWGPHIYFFFREMA
MEFNYLEKVMVSRVARVCKGDLGGSQRVLERQWTSFLKARLNCSIPGDSHFYFNLLQSTS
PIIRMQGRDVILGVFSTPSNSIPGSAVCAFDMQQLARVFEGRFKEQKSPESIWTPVPDEL
VPKPRPGGCAVQGSRFSSSNALPDEVLNFIKTHPLMDEAVPLLGHRPWIVKTMVRYQLNT
MVVDTEAGPHRNRTVVFLGSTRGTVLKFLITPSPENPYSNTNTFLEELEGYNPERCGDDS
VQARQPLSLTLDKPSHTLLLAFHSCVVRVPVARCQLHSRCMKNCIASRDPYCGWTRGSTC
SLLRPGTRLPFVQDVEYGNTSHLGDCDGLLRESFMDEPESLVTLNLLVVAAVSAFSTGAA
LSGLAVCWIMGQKHRHRSHSNTPSSSSQRKSEKERCIMGQSRSGSVMSVSRHSGTDRPRS
QGETLFVMPNGWVKAGDLDPGLLPTPEQTPLQQKRGLRLSDSGSSWDQSQTFLSSVGTQC
PPPPSTLFLSSKLLQGTGRRHEEAIETGIDRQRYVSLSKYRDQGIRPGTLLRKSAGEYNY
PMTPQDSPDRRRVVSAPSTQIEYSGEPLRWTHEGYIFSSHGIPPTGHHYTPASQHPAGLT
RSVLHGSRGLIDLADFSHLLGKGGNDRTPTGQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgaccccctgcttcttacggatttttgctgtcctccaattggctgcctgc
tcgtttccagaggaacctggccctttaatctccgcccctgctgaggtggtgaggcgatat
ccagtgtttgtgggccgagcgcatcgttcttacacccgccaggagccgctgtacattcag
accgtcctgaaagtcaatcgtacactctacattggagccagagatgacctttatcgagtg
gaactggaccatgtgtctggagatgaaatgttctacagcaagaaaaggacgtgggaatcc
aataagaatgacatccgcatctgtagaatgaagggcaaacatgaggaggagtgtcgtaat
tatattaaggtgctgttgagccatgatggagggctgtttgtgtgcgggacgaatgctttc
aacccgctgtgtgccaattacacgagagacactctggaattagttggagaacccatcagc
ggaatggcccgatgtccgtatgatcccaaacacgctaacgtggctctgtttgcagagggc
agcttattcacaggcacagtgactgacttcctggccattgatgctgtcatttatcgcagt
ctaggagagagtccggccctgcgcacgatcaagcacgattccaaatggttcagagagcct
tattttgtgagtgccgtggaatgggggcctcatatctacttcttcttcagggagatggcc
atggagttcaactacctggagaaggtgatggtttctcgcgtggcacgtgtgtgtaaaggt
gatttgggtggctctcagcgtgtgttagagcgccagtggacgtcgtttctgaaagcacgt
ctgaactgctcaatccctggagactcacacttctacttcaacctgctgcagtccaccagc
cccatcatacgcatgcagggcagagacgtcatactgggggtcttttcaacaccctcaaac
agcatccccggctcggcggtgtgtgcgtttgacatgcagcaacttgcacgtgtatttgag
ggcagattcaaagagcagaaatcaccagaatccatatggacacctgtacctgatgaactg
gtaccgaaacccaggcctggaggatgtgctgtccagggttcgagattcagctcctcaaac
gcccttcctgatgaagtgctgaatttcatcaaaactcatcctctgatggatgaagcagtt
cctttgcttggacacagaccctggatagtcaagaccatggttcggtaccagttgaacact
atggtggtggacacagaggcaggcccccaccgcaatcgaactgtggtgttccttggatcc
accaggggaacagttctcaagttccttatcacacccagcccagagaacccgtactccaac
accaacacctttctggaagagctggagggctacaacccagaaaggtgcggtgatgactct
gtacaggcgcggcagcctctctctctgaccctggacaaacccagtcacacgctcctgctg
gccttccactcctgtgtggtgagagtgcctgtcgcacgctgccaactgcactccagatgc
atgaaaaactgcattgcgtccagagatccatactgcggctggaccagaggaagtacctgc
tcactcctgcggccaggcaccagattaccttttgtgcaggacgttgaatatggaaacacc
tcacatctcggagactgcgacggtctgttacgtgagagttttatggatgagcctgaaagt
cttgttactttgaacctgctggttgttgctgcagtctctgcattctccaccggggcggcg
ctctcgggcctggcagtgtgctggattatgggccagaaacaccgtcaccgttcgcacagc
aacactccgtcgtccagtagtcagcggaagagtgagaaggagcgttgcattatgggacaa
agcaggagtggctctgtgatgagtgtatcccggcacagtggcacggaccggccacgctca
caaggtgagacgctcttcgtcatgcccaatggttgggtcaaagcaggcgacttggatcca
ggtctacttcccacaccggagcaaactcccttacagcagaaacgtgggctacgcctgtct
gattctggatccagttgggaccaaagtcagacctttttgagctcagtgggtacccagtgc
ccacctccaccatccaccttgtttctcagctctaaactcctgcaaggaactggccgacgc
catgaggaagccatcgagaccggcatcgaccgccaacgctacgtctccctctccaagtac
cgggatcagggaatacgtccaggcactcttcttcgcaagtcagcaggcgaatacaactac
cctatgactccccaagactcccccgaccggcggagagtggtgtcggcccccagcacccag
atcgagtacagcggagagcctcttcgctggacccacgaaggctacatcttcagcagtcac
ggcatacctccaacgggccaccactacaccccggcctcgcagcatccagcgggactgaca
cgctccgtgctccacgggtcccgggggctcatcgacctggcggacttcagccacctgctc
gggaagggagggaacgatcggacaccgacaggtcagtga
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