Ctenopharyngodon idella (grass carp): 127499614
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Entry
127499614 CDS
T08802
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127499614
Membrane trafficking [BR:
cide04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127499614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
127499614
NCBI-ProteinID:
XP_051725966
LinkDB
All DBs
Position
18:23206064..23240883
Genome browser
AA seq
1725 aa
AA seq
DB search
MEEKSLRVADYFVVAGLTDSSKPLDEDVHPEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGFTCVECTPSGLSAELNGGSLMGPQIYLCYRRGRDKPPLTDLGILYEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSNSTLAVTDICVIIPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFTAGLLSRYPEEDYDSFPLPESVPLFCLPMGVSI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRTQLGLQANGLRP
DGSMTVHTNKSICLLSHWPFFDAFQNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
TDISCVDLDTNTITQKEERRSLTWKILPRKACKHLINTLSNLHQQLDEGYQMSREEGQME
AFMTEREPGCVGKSLETLEMEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVYSYSGFPVLNAQLCELQ
DGPKVPKATSAMRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKARVLHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVALFKQVWRRQT
THPKDTHLSDASDLDNVSHGSLDSSNDSAERASIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNPSPDMKEKKDRNSCSLSQTISKMEDSSLLVGTHPSATNGETNHFL
SEALPKTKRPNSLNIFGEKPVRPSTLDLTPGKTVEELCTESVAALIETDAVGGVVSPPKV
AVERTASCTVAMEKRVAMEREHIGVERSVSCSGALGRVVKRTGIEAGFDPLSLMVAETQV
HSEGDNADTPTARRDLAEEIHHYMNNLSSPLSQRSLSVDLKGLQTPSPHSSPRMSAAAGS
PCTSQLQPQPRTRLFSSPSLPQGRVRRVREQRPTSLASPSSPTPSSSSFSMDSLLTPTLD
VFKSSFLSAGKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDCSSLIESDSC
VDPDGLSSPQRDATQPVTRPKRSPYRSNHCLESPSAPPRLFRQSSLTGPSLTITKALQTS
DVCSDSSLTQCTQNYAIEVRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSP
FLPLLNVDIRNLGDQERSPSQDTHTCQTDAADELSQVYDVTGNLSSNGKKDPEPVTVPYL
SPLVLWKELESLLENEGDQAVSSAAIVDHHPIVFWNLVWFFRRLDLPSSLPGLYLSSKHY
SKDVQPLQSCASEDSKNVLVQILWDNPRLHQDPIQPCYLLWKSYCANPAVSAALWEEEQS
VSLELLQSVVKSIQRNDVYQPMSQILQVLGTRLGFVRQRSLYRDILFLALVALGKSSINI
DAFDREYKMAYDRLTPSQVKMTHNCDRPPSAGVMECKRTFGLPNL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaagccttcgtgtagcagactactttgttgtggctggactcaccgactcg
tctaagcccctcgatgaagatgtccaccctgaagatggtggtcaccggagctcagcacag
ctcaaggcaccgatcactgatgtggcggtggtgattcgctccctaggggaggaggtacct
cgagggtttacctgtgttgaatgcaccccctctggactctctgctgaactgaatggagga
agtctcatggggccgcagatctacctctgctacagaagaggcagagacaaaccgccgctc
acagacctgggcatcctctatgagtggaaggagaaattgaagcctgactgtcaaataata
cagaccacgccatctggccgccctgccaatatcagtagctcctcttcccaaaggatctac
atcacatatcggcgtgcctctgaaaatcactcaaactctacgctggctgtcacagacatc
tgtgtcattattcctggcaagggagagacaccaccacatgctttctgcaaggtggacaag
aacctcaacagcagtatgtggggttcctctgtgtacttgtgctacaaaaaatctttggcc
aaaaccaacacacttgcattcacagcaggtcttttgtccagatacccagaggaggactat
gattcctttcctttgcctgaatccgtacccctattttgcctaccgatgggagtgtccatt
gagtgctggccctctcataccaaatattctcttcctgtcttttcaacatttgttctcaca
ggcgcctctggagaaaaggtttatggtgccgccatacagttctatgagccctacccagaa
gaacatttgactgacaagcagcgaactcagctgggcctgcaggctaatgggctcaggcct
gatggatccatgaccgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccaaaacttcctgaccttcctctacagatactccatctcaggtccacac
actctgcccattgagaagcatatttcccatttcatgcacaaggttccttttccttcctct
caaaggccacgtatcctggtgcagctgtctccacatgatagcctgatgctgagccagcct
gtttcctctcctctccctctgagtggcggaaggctctctacactgctgttgaacctcggc
ccaaagaatgctgtgactctgctggtgttagctgtgactgaacataagatcctggtgcac
tccttacgtccggctgttcttaccagcgttaccgaggccctggtatcgatgatttttccc
ttccactggccatgcccgtacatacctctctgcccgctggccctggcagatgtactcagt
gctccatgccctttcatcgtaggggtggattcacggtactttgacctctatgagccaccg
acggacataagctgtgtggacctggacaccaacactataactcaaaaagaagagcgcaga
tccctgacctggaagatcctgccaagaaaagcctgtaaacatctgatcaacaccctcagc
aatctccaccagcaactggatgagggttatcagatgagtcgtgaggaaggacagatggag
gccttcatgaccgagcgggaacctggctgtgttgggaagagtctggaaaccctggagatg
gagatccaggaggctttcctgcgcttcatggcggccatcttgaagggctaccgctcgtac
ctgttgcccatcacacaagctccgtctgagaaagcaacagatgccagttcactctttgat
ctgcaaggctttttgaagagtcgtgatcgatcccatcaaaagttttactccctcatgacc
aagactcagatgttcattcgtttcatcgaagagtgctcttttgtcagtgataaggatgca
agccttgctttctttgatgactgcgttgacaagttgttcggcacggagaaaggagggaag
gtggacagcgataagccagaggacacaagacttattgaacttgacaaatcccaccgcagc
gagcacactgtctacatcacccccccagagctgccggcacttccagaaggagaagagcca
cctatggtttatagctacagcgggttccctgtactgaacgcccaactctgtgagcttcag
gatggtcccaaagtccccaaagcaacatcagccatgagacacatcagtcccatcagccca
gctgctattttcaggcgctcccaacaggagatcaaatcagcccagcggatggctaagacg
tattcctccatcccgcagatgtggtccaagtgtcttctcaggcattgtcacggtctgtgg
ttcatctgcttgcccgcgtatgtcagtgcctgccactctaaggcgcgggtgctgcatact
gcttacgacgtgctgagaaatatgcaggacaaaaagttgcagccccctgatgaggtgtgt
taccgggtcctgatgcagctgtgtgggcagtatggacagcctgttttggctgtccgggtt
ctttttgagatgaagaaagccggagtgcagcctaatgccataacctatggatactacaac
agggccgttctggagagcacatggccttcctcgactagagggggatacttcctgtgggga
aagttgagaaatgtggttcggggtgtggcgctgttcaaacaagtatggaggaggcagacc
acccacccgaaagacacccatctctctgatgccagtgatctcgacaatgtcagccatggc
agtctggacagctctaacgattctgcggagcgagcttccattgatacagacttcactaaa
atggattccagtgatgacagatccagcacaggtggtcagtctgatcagggctatgactct
ctgtctaaagaggaggtgaggttaggaggaggtgaggagcagaacccttctccagacatg
aaagagaagaaggacagaaactcttgctcattgtctcagactatctcaaagatggaggat
tcatcccttctggttggaacccatccatccgcaaccaatggggagaccaatcatttcctt
tctgaagccctcccaaagacaaaaaggccaaattccctgaatatttttggagaaaagcct
gtgaggcccagcacactggatctaaccccgggtaagacagtagaagaactctgtactgaa
tctgtcgcagcactgatagaaacagatgcagtggggggcgttgtgagcccacctaaagtt
gccgtggagaggactgctagctgcacggttgccatggagaagagagttgccatggagagg
gagcacatcggcgtggagaggagcgtgagctgcagcggtgcacttggccgagtggttaag
aggacgggtattgaagcaggatttgatcctctgtccctcatggtggctgagactcaagtc
cacagtgagggggataatgcagacacccccaccgcccgcagagacctggctgaagagatt
catcactacatgaacaacctgagtagcccgttaagccagcggtctcttagtgtggacctc
aaggggctccagaccccgtccccgcacagctctccccgcatgtccgcagcggctggctcc
ccctgcacctcccaactccagcctcagcctcgaacacgactcttctcctcgccctccctc
cctcagggccgagtgcgcagggtcagggagcagcggcccacctccctggcctccccttcc
tcacctactccctcctcttcctctttctccatggactctctcctcaccccgaccctggac
gtgttcaagagcagcttcctctctgctgggaagggggtcgctgagaaagccagccgactg
tattcacgactttcctcccaaacgtccattgcacaggatttaaactctgaccgggtcagt
gtgtcttcactggggtcaggtgaccctgattgctcctctctgatcgaaagcgattcctgt
gtagaccccgatgggctctcttccccccagcgggatgccacccagcctgtcacgcggccc
aaacggagcccttacagaagcaaccactgcctagaaagcccatccgcaccacctcgactc
ttccgacagtcctccctcactggtccatcgctgacgataacgaaagctctgcagacctca
gacgtgtgttctgattccagcctcactcagtgcacgcagaattacgccattgaagtacgt
atgtccagttgttcacgctgtaacacctgtgagagtttggtgtatgatgaagagatcatg
gctggttggacagctgacgactccaacctcaatagcacgtgccccttttgcggctctccg
tttctgcccctgctcaatgtggacattagaaacctgggtgaccaggaaagatccccctct
caagacacacatacttgccagacagacgccgcagatgaactttcacaagtttacgatgtc
actggcaatctgtccagcaatggaaaaaaagaccctgagccagttaccgtgccctacctg
agtcctctggtactttggaaagaactggagagcttgctggaaaacgagggagaccaggcc
gtctcatctgcagccattgtggatcaccaccccattgtgttctggaatctggtgtggttt
ttccgtaggctggacctgcctagcagccttccgggactctatctgagctccaaacactac
agcaaagatgttcagccgctgcaaagttgtgcatcagaagacagtaaaaatgtcttggtt
cagatcctgtgggacaaccccagactgcatcaggaccccattcagccctgctacttgctc
tggaaatcatattgtgcaaatcctgcagtatctgctgccctgtgggaggaggagcagtct
gtgagcttagagctgctgcagagtgtcgtgaagagcatccagaggaacgatgtctatcag
cccatgagtcagatactgcaggtactgggcaccagactgggcttcgtcagacaacggagc
ttatatagagacatcctgttcctagctttggtggctttgggcaaaagtagcataaatatc
gatgcattcgaccgtgaatacaaaatggcatatgaccgtttgacacccagccaggtcaag
atgacccacaattgtgaccggccacccagcgctggagtcatggagtgcaagagaaccttt
gggctgcccaatctgtga
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integrated database retrieval system
