Ctenopharyngodon idella (grass carp): 127499764
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Entry
127499764 CDS
T08802
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127499764
04137 Mitophagy - animal
127499764
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127499764
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127499764
04121 Ubiquitin system [BR:
cide04121
]
127499764
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127499764
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127499764
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Others
Others
127499764
Ubiquitin system [BR:
cide04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127499764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
127499764
NCBI-ProteinID:
XP_051726283
LinkDB
All DBs
Position
18:14256593..14265159
Genome browser
AA seq
1043 aa
AA seq
DB search
MPSVSSGVKDLYLSTSLRDLNKKAEVKPERTSTRNYVQSACKIFKAAEECRLDRDEEKAY
VLYMKYLTVYDLIKKRPDFKQQQEFFLSMLGPTSFKKAIEEAEKLSESLKLRYEEMEVRK
QLEEKERKEEKSRQERTEKDGRASPRGASEKKEKKVKGEPNSSKTGSDKGSISAEGLFHL
MKDPNISVLVMDARCRQDFEESQMCVPSQTCISVPEEAVSPGVTVNQIELKLPAASLDDW
KRRGFVDYVVLLDWFSCVSDLKLGTTLQSLKDALYKWDSSTILRSEPLVLEGGYDNWLLF
YPMYTSNAKVKPPRQQESSALPQLNFTYPSLEEPKPVIVCEEPAAAQLNGTTSSQEAPVE
PPAEPLANTHAPLTQPASTDIAVPPVASPRHTPQVDRTKKPAVKPASSVKVSDEPAVNDS
PVALNGLVVPDRSTKPLTDPSRALSEEERREIHAETVSLMEKARKEQEQRKRALEEKKER
EEREAAERRQREQKEKEEEEKQERKKLERQRAEEEDLGEKGRDEKGRKAQKDVPLDAAMK
SMSLDSPAPMSSRDTLTRAHSEEMGRTVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYP
PEVNTPQIQPSAAKAKPAQPVETEREKEHEREREKEREREQSKLKRSYSSPDISQELSAE
TSRKPAAIPTVNRENKPLTAASYKTVEIARPSAAKIRNLNPVFGGLGPLLTGLRNLGNTC
YMNSILQCLCNTVAMADYFNRNYYQDDINRANILGHKGEVAEEFSVIMKALWSGQYKMIS
PQDFKGTICKINNRFSSYEHQDSQELLLFLMDGLHEDLNKADKRRGYKEEDIDHLDDVSA
AELAWSKHKLLNESIIVALFQGQFKSTVQCMSCQHKSRTFETFMYLTLEMTASSKCSLQD
CLKLFSKEERLTDSNRFYCRHCKTHRDAIKKMQIWKVPPILLVHLKRFKYDGRWREKLQT
LVDFPLDNLDLSQYVIGPKPSLKKYNLYAVSNHYGGMDGGHYTAYCKNPLKQRWFKFDDH
EVSEISASSVRSAAAYIFFYSSL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgtgtcgagcggagtgaaggatctgtatctgtccacatctctgagggatctg
aacaagaaagcagaagtcaaaccggagagaaccagcaccagaaactatgttcagagtgcc
tgcaagatcttcaaggcggcagaggagtgtcgtctggaccgagacgaggagaaagcctat
gtcttgtacatgaagtatctgactgtctatgacctcatcaagaagagaccagacttcaag
cagcagcaggagttcttcctgtctatgctcggaccaaccagctttaaaaaggccattgag
gaggcagagaaactgtcagagagtttaaagctccggtatgaggaaatggaagtgcggaaa
cagctggaagagaaagagagaaaggaggaaaagagtcgacaagaacgaacagaaaaagac
ggacgcgcttcacccagaggagcatcagagaagaaggagaagaaggttaaaggggaacct
aatagcagtaagactggaagtgataaaggaagcatcagcgcggagggtttgttccacctg
atgaaggaccccaatatcagcgttctggtgatggacgcccggtgcaggcaggacttcgag
gagtcgcagatgtgcgtcccgtctcagacgtgtatcagcgtacctgaggaggccgtcagc
ccgggggtgacggtgaatcagatcgagctgaagcttcctgccgcgtctctggatgactgg
aagcgccgagggttcgtggattacgtggttctgttggactggttcagctgcgtctctgat
ctcaaactgggcaccactttacagagtctgaaggatgctctctataagtgggacagcagt
acgatcctgcgcagtgagccgctggtgctggagggaggatatgacaactggctgctcttt
tacccaatgtacaccagcaacgctaaagtcaagccacccagacagcaggagtccagcgca
ctgccacagttgaacttcacgtacccgtcgctggaggagcccaaaccggtgattgtgtgt
gaagagcctgcggctgcgcagctcaacggcacaacttccagccaggaagcgcctgtggaa
ccgcctgcggaacccctcgcaaacacacacgcgccactcacacaacccgccagtactgac
atcgccgtgccgcccgtcgcctcgcccagacacactccacaggtcgaccgcacaaaaaaa
ccagcagtgaaaccagcctcgagcgtgaaggtcagcgacgagcctgcggtaaacgacagc
cccgtggcgctcaacggcctggtggtgcccgaccgctcgaccaaacccctcacggacccg
tccagagctctgagcgaggaggagcggcgggagatccacgccgagaccgtcagtctgatg
gagaaggctcggaaagagcaggagcaacgcaagcgagcgctggaggagaagaaagagagg
gaagagagagaggcggcagagagacgtcagcgagaacagaaggagaaggaggaggaggag
aagcaggagagaaagaagctggagcgacagagggcagaagaagaggatctgggagaaaag
ggcagagacgagaagggcagaaaagcgcagaaggacgtcccgctggacgctgccatgaag
agcatgtcgctggactcacctgcaccgatgagttctagggacacactgacgagagcacac
agtgaggagatgggccgaaccgtacctgggctgccggacggctggatgaagtttctggac
acagtgacgggcacctacagatattaccactcgcccaccaaccgcgtgcatctgtaccct
ccggaggtcaacacgcctcagatccaacccagcgcagccaaagccaagccggcacaaccc
gtggagacggagagagagaaggagcacgagcgggagagagagaaggagcgggagcgagag
cagtccaaactgaagcgctcgtactcgtctccagacatcagccaggagctgagcgccgag
accagccgaaaacctgcagccatcccgaccgtgaaccgagaaaacaagcctctgaccgcc
gcctcatataagacggtggagatcgcgcgcccgtctgcagcgaaaatccggaacctgaac
ccggtgtttgggggtctggggccgttactaacgggcctccgtaacctcggcaacacctgc
tacatgaactccatcctccagtgcctgtgtaacacggttgccatggcagactatttcaac
aggaattactatcaggacgacattaaccgggcgaatattctgggtcacaagggcgaggtg
gccgaggagttcagcgtgatcatgaaggcgctgtggtcgggacagtacaagatgatcagc
cctcaggattttaaaggaaccatctgtaaaatcaacaaccgcttctccagctacgagcat
caagattcacaggaactgctgctgttcctcatggacggactgcacgaggatctgaataag
gcggataaacgcaggggttataaggaagaggacatcgatcatctggatgacgtgagcgct
gcagagctggcctggtccaaacacaagctgctgaacgagtccatcatcgtggctctgttt
cagggccagtttaagtccacggttcagtgcatgagctgccagcacaagtcccgcaccttc
gagaccttcatgtacctgacgctggagatgacggccagcagcaagtgctctctacaggat
tgtctgaagctgttctctaaagaggagcgtttgaccgacagtaaccgcttctactgccgc
cactgtaagacgcaccgagacgccatcaagaaaatgcaaatctggaaagttccaccgatt
ttacttgtgcacttgaaacggttcaaatacgacggccggtggcgggagaagctgcagacg
ttggtggatttcccgctggataatctggacctgtcgcagtacgtcattggacccaaaccc
agcctgaagaagtacaacctgtacgccgtgtctaatcattacggcgggatggacggcgga
cattatactgcctactgcaagaatccgctcaagcagcgctggttcaagttcgacgatcac
gaggtgtctgaaatctccgcctcctccgtccgctcggccgcggcctacatcttcttttac
tcctccctatga
DBGET
integrated database retrieval system
