Ctenopharyngodon idella (grass carp): 127499814
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Entry
127499814 CDS
T08802
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127499814
04121 Ubiquitin system [BR:
cide04121
]
127499814
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
127499814
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Atypical E3
127499814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
GnRH
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127499814
NCBI-ProteinID:
XP_051726381
LinkDB
All DBs
Position
18:3690327..3695203
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AA seq
613 aa
AA seq
DB search
MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPGGKHGPAGKEGPMEAGRPPSERYERGRGEYGSSRLPNGLPRLEDGGP
PEVSRQSPTARRTLVGAVPPNLMAQGLVGAPHGLLTAMPGLNARAGGAPLTISAPMLNEI
SKRQALGMGMNVGVASFMSPEFEKELKEKQRNAEALTELSESVRNRADDWAGRPKHMREA
LHTLSGCTPFNVRFKKDHGLVGRVFAFDVKLMVEFELKVFVEYPCGSGNVFSSVLALVKQ
MFHDSQKDTGKVINSGYKYVEYEKRHGTGDWRLLSELLSDAVRAFKDAPAPDALPQPYLD
ASCSMLPTALCHIGRPTQPRVRRRKASPEPEGTERMTSEEMRQHWSLGVYPGIPGHMPAT
SLASAGQPPEAHSSDPSPITALMSVADNVGTATPKDAPGGSGSHSANAGRQNSTSPSPGG
QRRLASRNGEPSAGSSSGGPTTTVTVPLSDQGAVMGAEGSGGAAGGGAPLCCTICHERLE
DTHFVQCPSVPGHKFCFPCTRDFIRRQGSGSEVYCPSGEKCPLVGSNVPWAFMQGEISTI
LAGDVKVKKERDP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcgcaggcatcttccaggcggcaatggtgctacctttgcgacctgcca
aagatgccttgggccatgatttgggacttcagcgaggccgtgtgcagaggctgtgtgaac
tacgagggcgcggacagaatagagttgctcatcgacacggcgcggcagctcaagcgaaca
cacgtgatgcaggacggcagatctccgggtccgcagcctggcggtaaacacggtcccgct
ggtaaggagggtcctatggaggccggcagaccgccctccgagcgatatgaacggggaagg
ggagagtatgggtccagcaggctgcccaacgggctgcctagactggaagatggaggtccg
cctgaggtgagtaggcagagtcctactgccaggaggactttggtgggggctgtgccaccc
aatttaatggcgcaggggcttgtcggagcccctcatggtctgctgaccgccatgcctggt
ctgaatgcccgagccggaggtgcccccttgaccatttctgctcccatgttgaacgagatc
agtaaaagacaggccctgggcatggggatgaatgtgggtgtggcttctttcatgagccct
gagtttgaaaaggagctcaaggagaagcagaggaatgctgaagcactcaccgagctctcc
gaaagtgtaaggaaccgcgcggatgattgggcgggacggcccaaacacatgcgcgaggcc
ctgcacaccctttctggctgcaccccgttcaatgtccgctttaagaaggaccacggcctg
gtggggagggtgttcgcctttgacgtcaagctgatggttgagtttgagctgaaggtgttc
gtcgagtacccgtgcgggtctggtaacgtgttctccagcgtgttagcgctagtcaaacag
atgttccacgactctcagaaagacactggcaaggtcatcaactccggctacaaatacgtg
gagtatgagaagaggcatggcaccggcgactggcgtctcctgtcagagcttctcagcgat
gcagtgcgggcgttcaaagacgcaccggccccggatgccctcccacagccgtacctggat
gccagctgctccatgttgcccaccgcgctctgccacatcggccgtcccacgcagcccaga
gtacgcagacgcaaagcctcgcccgagccggaaggcaccgagaggatgacctcagaggaa
atgcgccagcactggtccctcggtgtgtaccctggcattcccggccatatgcccgccacc
tcgctagccagcgcaggacagccaccggaggcccacagtagtgacccttcgcccatcact
gcgctcatgagcgtggctgacaacgtcggcactgccacccctaaagatgctcccggcggc
agcggaagccactcggcgaacgcaggccgtcagaacagcaccagtccttcgcccggcggt
cagcggcggctggcgtcacgcaacggagaaccatcggctggcagtagctcgggagggccg
accacgaccgtcaccgtgcccctctctgaccagggtgccgttatgggagccgaaggctca
ggaggagccgcaggcggcggcgcccctctctgctgcaccatctgtcacgagcgcctagag
gacacacacttcgtccagtgtccatctgtgcccgggcacaagttctgcttcccttgcacc
cgagacttcatccgcagacagggctcaggaagtgaagtgtactgccccagcggggagaag
tgccccctcgtgggctccaacgtgccgtgggccttcatgcaaggcgagatctctacaatc
ctggcaggtgatgtgaaggtgaagaaggaaagagacccctaa
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