Ctenopharyngodon idella (grass carp): 127499891 Help Entry 127499891         CDS       T08802                                  Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04142   Lysosome Brite KEGG Orthology (KO) [BR:cide00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     127499891  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cide04131]     127499891 Membrane trafficking [BR:cide04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     127499891  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     127499891    RAVE complex     127499891 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_IFT140_1st EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_LRRK2 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SCAP WDR90_beta-prop_4th VPS11_N Beta-prop_VPS8 NBCH_WD40 Beta-prop_RIG_1st Motif Other DBs NCBI-GeneID:  127499891 NCBI-ProteinID:  XP_051726541 LinkDB All DBs Position 18:7750581..8228940 Genome browser AA seq 3042 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVHDVPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV GCVECSQQLGRIAASYGNTVCIFEPITSNPNKRHKQLNYQWQKTGQFFLNAITYNLAWDP QGNRILAATEHLQLWAPPTSDTLIEEEECQLNDDRAHELVLNDWKCVWQCKTAAAVHITQ WSPDGEYFATAGKDDCLLKVWYPTTGWKSAVVMPDVTDKKVPAVHFSFVYLAHPRTVTGF SWRKTSKYMPKGSVCNVLLTSCADGICRLWSETLLPEDSLLGGQISENSTSFSSSLPNIA QKDKIQHALESIHHLKHLRRGRRRSSALVAHTELLPSQLGSHETHRHISHHANALCHFHI SASINPNTDIPAALAGSGLFSEDVSGGFVVHWLNNKDLSFTTSMDLFMQQLRKLSEQHLE QATEDFEPEGAPKFDFDLDEMSDKGSSEHEEGDQEGSTKASSPGSSSSVPLPSVLLDRKL ETLILEWNKSPDMLFTIHPHDGSFLVWHVKYLDEFIPGIFRQVQVSFSSRIPVAFPTGDA NSLSKNIMMYACTFMDQDSCSALEEKRSERRVPQSASASAGLGALGHSLAAVIGPAVMMV SKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNA LLTPPSGSGSIDGDQIGGVALHPTRPMRGVPRKQLRNAATRTFHDPNAIYSELILWRVDH IGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFVASDGKNLRL YQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSNTQLLHV FQEDFILGYKPHEDIPDFNITSFPTAEEYQPPPFSEKFYLVVIEKDAYRSSVLQMWHLHL RSVQACVEEPVNDQVFQNQLTVPLSQNNADSSPEITPGHSPLPRSSSSANLQSASKLILS SKLVYSQRLDLPSGVELIRATPSAGHLSSSSIYPVCLAPYLIVTTCSDGRVRFWHCRVDM DSSAPHPEETRSYRWEHWSLLKDEEDNDSSVCVAGRPVAVSCSYTGRLAVSFKQILPGNE GDMSQDFSMLVSIYECESTGGSEWVLEQTIHLDDFCKPAKTLDPRVSVDSNLVVYSKLDL FVTKDSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVTEQTRVKDGMAVTLP LGGSIKQGIRSRWVLLRSVNLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMQVYAQWRQD EKPGDSEDNSISSPEAIGGRTVSVSNEGRARSKSVFEGSAGIDDAFRPPAVIQDGGLFEA AHSLSPTLPQYHPSQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHL SRTISVTGSTAKDIIVAGRDSGRDYTEINSIPPLPLYALLSADQDTSYKAGEEMGKAGKG AENEMQNQSEDQYADLFQVQAVTTDDFVSFAAEKPEKKSRVINLSQYGPTYFGPEHAQVL SSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVSGPTDKQYSGGDALDECGLRYLLAMR LHTCLLTSLPPLYRIQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDPQWSELRAVG VGWWIRNINTLRRMVEKVAKAAFQRNNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQF FSHNFREDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMIV ARLYEADYESSSTCQGILYEKVLGCNRDGSGFSCTKLHPDPFLRSIAYWIMKDYTRALDT LLEQIYKKDDENPDVLVKSCNPVVFSFYNYLRTHPLIIRRHFANPEGFVAAVGLTERNSA DEINLIERKLFFTTANAHFKVGCPLLALEVLSKIPKVTKKASSLSKGSSVANINAGQPQQ NGGKASELDWGAPAIPSQTWGADSSTSLDWSQPLVKLEDENLQLDWGDDKEEDEDEEGGL TMKKPEVEDEDSKKPSKSAALQREDSACESEVDVIAEQLKFRACLKILMTELRTLATGYE VDGGKLRFQLYNWLEKEIEAVHHICNYKVEGKASVGQLEKWGGDGSLDLEDSQIRGEAGA YERHQMERRRLQAKQLHAERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELLFLL QESQQEMTVKQLQSPLPLPTTLPLLSASIAPTKTVIANPVLHLGNHIHDILYTVVQMEAP PHPDIVDDRVNALHTLAASLSACIYQSLCDSHSYSSQAEANQYTGMVYQGLLLSDRRRLR TESIEEHATPTSAPSQWPGVSSLINLLACAQGDDHVRLNVMLCEAVVAVYLSLLIHGLGT HSGNELFRLAAHPLNNRMWAAVFGGGAKLIVKPKRPPEITPAVPPPTPPAEDVDRQRRRF NMRMLVPGRPVKETPATPPPVPVERPTYKEKFIPPELSMWDYFVAKPFLPLSDSGALYDS DESGTSDNEDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFLPLTGLDFTE LPVTSPLANAVLKTLENWEQILLEKINKFDGPPPNYINTYPTDLSAGGGPAILRHKAMLE PENTPFKSKHHLSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSESLDHVDHLIQNGIT GARKNNKVEADMGYPGGKAKIIHKESDIIMAFAINKANTNEIVLASTHDVQEVDVSTLLA AQPYTWIGEEFDKESRSSDDVDYRSSHTNIAQASTGPFAPQQMAASSSMPWLGSGQTSMG ASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYF NSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSCCDFAFITSSSLIATAGQSN DGRNVCLWDTLISPSNSMIHAFQCHENGATVLQYAPKQQLIITGGRKGFVCIFDIRQRQL LHTFQAHDSAIKALAMDSTEDFFVTGSAEGNMKVWKLAGNSLMHSFSTEHAKQSIFRNIG AGVMQIETCPGNRIFTCGADGTLKMRVLPDRYNIPASIFQIL NT seq 9129 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcaccaggtgctgacgggggccgttaacccaggggactgctgctactccgtg ggaagcgtccacgacgtcccgttcacggcgtatggctcaggatgtgatatcgtgatcctc gcaagtgattttgaatgtgttcaaattattcccggagctcagaatggaaacatccaggtg ggctgtgtggagtgctctcagcagcttggccggattgctgcatcttatggaaatactgtt tgtattttcgaaccaattacttccaatccaaacaaacgtcacaagcaactgaattaccaa tggcaaaagactggtcagttcttcctcaatgctataacctacaatcttgcctgggaccct caaggcaatcgtatcttggcggcgactgagcatttgcagctgtgggctcctccaactagt gacacactgatagaggaagaggaatgtcagctgaatgatgacagagctcatgagctcgta ctcaatgattggaagtgtgtctggcagtgcaagaccgctgctgctgttcacatcactcaa tggtctcctgatggagaatactttgccacagctggaaaggatgactgcctgctgaaggta tggtatcccaccacaggatggaagtctgcagttgtgatgccagacgtgactgataaaaag gtcccagcggttcatttctcattcgtgtatctggcccatccacgtacggttacaggcttc tcctggaggaaaaccagtaaatatatgcccaagggctctgtgtgtaatgtgctgctgacg tcctgcgcagatggcatctgtcgtctgtggagtgagaccctcttgcctgaggacagtctg ttgggagggcagatctcagagaacagcaccagtttcagctcctctctgccaaacatcgct cagaaagacaagatacagcacgctctggagtctatccaccacctcaaacacctgcgcagg ggccgcagaagatcgtccgccctggtggcccacactgagctgctgcccagccagctgggg tcccacgaaacccaccgccacatctcgcaccacgccaatgccctctgccacttccacatc tctgccagcatcaatcccaacacagatatccctgcagcactggctggatcgggcctgttc tctgaggatgtcagcggagggtttgtggtgcactggctgaataataaagatctgagcttc accacctccatggaccttttcatgcagcagctgcgcaaactctctgagcagcacctggaa caagccactgaggactttgagccggagggagctcccaaatttgacttcgatctggatgag atgtctgataagggttcatcagaacatgaggagggagatcaggagggaagcaccaaggcc tcttctccaggttcaagcagcagtgttcctctcccctctgttttgctggatcggaagctg gagactctcattctggagtggaacaagagtccagacatgctcttcaccattcacccacac gacggatccttcctcgtctggcacgtcaagtacctggatgagtttatacctggcatcttc agacaggttcaggtatcgttctcctctcgtatccctgtggcgttccccacgggcgatgct aactctctcagtaagaacatcatgatgtacgcatgtacgttcatggaccaagatagctgc agtgctctggaggagaaacgaagtgagcggcgggttcctcagagtgcgtctgcgtctgcg gggcttggtgctcttggacactctcttgctgctgtcattggccctgccgtcatgatggtg tccaaacatgtagatggctcgctcaaccaatgggctgtgacctttgcagagaagtctgcg ttttcaaacgtcctcacagtttcgcacaagttccgttactgcggacaccgtttccatctc aatgatttggcttgtcacacggtccttcccttgctgctaacatcatcacatcacaatgca ctgttaactccgccctctggatctggaagtattgatggagatcagattgggggtgtggct ctacaccccaccaggccaatgagaggcgttcctcgtaaacaactgcggaatgcagccaca cgtacgttccacgacccaaatgcgatctatagtgagctgatcctctggagggtcgatcac attggcccactgtcctgcacagggggcgtgtccgagctagcacgaatcaactctctccac acatccgcattctccaatgtggcctggctaccaacactcgtccccagctcagtactcgga acgtactgtaactcagcaagtgcgtgctttgtggcgtctgatggtaaaaacctgcgtctg tatcaggctgtggtggatgcccgcaaactattggatgaactctctgacccagagacctct aaactagtgggtgaagtgttcaacattgtgagtcagcagtccactgcccgacccggctgc atcatcgagctggatgtcattaccaaccagtgtggctcaaacactcagctgctccacgta ttccaagaggattttattttaggatacaaaccacatgaagacattccagatttcaatatt actagctttcccactgcagaagagtaccagccccctcctttctcagagaagttctacctg gtggtgattgagaaggatgcatatcggagctcagtattacagatgtggcatcttcatttg cgctcggtgcaggcttgtgtggaagagccagtaaatgaccaagtttttcagaaccagctg acggttcctttgagtcaaaacaatgctgactcatctcctgaaatcactccgggtcatagt ccgctgccccggtcctcctcttccgccaacttgcagtcagccagcaaactcatcctgagc tctaaactggtctacagtcagcggctagacctgccatcaggggtggagcttatcagagcc acaccctctgctggccacttgagctcctcgtctatctatcctgtttgtttggctccatac ctgattgtgaccacctgttctgatggacgtgtcaggttttggcactgtagggtagacatg gactcgtcagcaccacaccccgaagagactcgttcatatcggtgggagcactggagcctc ttgaaagatgaagaggacaacgacagctctgtgtgtgttgcgggccgacctgttgctgtc agttgctcctacacaggaagacttgcagtatcgttcaaacagattttgcctggcaatgaa ggtgatatgtctcaggacttctccatgcttgtatcaatctatgagtgtgagtcgacgggt ggctcggagtgggtcctagaacagacaattcaccttgatgatttttgcaaacccgcgaaa acgctagatccgcgtgttagtgtcgatagcaatttggttgtctatagtaagttggatctg tttgtaaccaaagacagccccaatatcaagcactttgtgcacctagactggctgtctaaa gaagatggctcccacatcctgacagttggggttggatccaacatccttatgtatggacgc atctcaggggttgtcactgagcagacaagagtgaaggatggcatggcagtcactctgcct ctagggggaagcataaaacagggaattcgctctcgttgggtgctgctgaggtctgtaaac ctagtctcttctgtggatggcaccccatccttgccagtgtccctatcctgggtgcgtgat ggtatcctggtggtgggcatggactgtgagatgcaggtttacgcgcagtggaggcaggac gagaaaccgggtgactcagaagacaacagcatctcatccccagaggccattggaggtcgc actgtctccgtttcaaatgagggcagagcgcgatctaagagtgtcttcgagggcagtgcg ggaattgacgatgcattccgccccccagcggtaattcaagatggcggcttgtttgaggca gcccattcattgtcgcccactctcccgcaataccatccatcccagctgctagagcttatg gacctcggaagggtacgtcgagccaaggctatcttggcgcacctagtcaaatgcattgct ggagaagttgcggtggtgagggatgtagaagcaggtgaaggtggtgcaaggaggcactta tctcgaaccatcagcgtgacgggtagcacagcgaaagacattatcgttgctggccgagac agtggccgagattacactgaaatcaactccatcccccctcttccattatatgccctgctg tccgcagaccaggacacatcttataaggcaggagaggaaatgggaaaagctggaaaaggg gcagaaaatgagatgcagaatcagtcagaggaccagtatgctgatttgtttcaggtgcag gctgtcaccaccgatgattttgtgagctttgctgcagagaaaccagagaagaagtctcgt gttattaacctatcacagtacggccccacgtactttggccctgaacacgcacaggtgctg tcttcacatcttatgcactccagcctgccgggactcacgcgcctcgagcagatgttcctt gtggctcttgctgatactgtggcgaccactagtgctgaggtttcaggacccacggataag cagtactctggtggagatgctctagatgagtgtggtctacgttacctgctggccatgaga ttacatacctgtctgctgacctccctgccccccctctacaggatacagctactgcatcag ggagtgtccacttgtcactttgcgtgggcgttccattccgaagctgaagaggagatgttg aacatgatacctgccatgcagagaggagatccacagtggtctgaactcagggcggtgggc gtcggctggtggatcagaaacattaacacgctgaggcggatggtggagaaggtagccaaa gcagcatttcagaggaataatgatccgctggatgcagctctcttctatctggccatgaag aagaaggccgttctctggggtctcttcaggtctcaacacgatgagaagatgacccagttt ttcagtcataacttcagggaggaccgctggaggaaggcggctttaaagaacgccttttct ctcctgggaaaacagcgctttgagcagtcggctgcgtttttcctgctcgctggctccctg aaagacgccattgaggtttgtctggagaaaatggaggacatccagcttgcgatgattgtt gctcgtctttacgaggctgattacgagagttcatccacctgtcagggtatcctttacgag aaggttcttggctgcaacagagatggaagcgggttctcttgtaccaaactgcaccctgac ccattcctgaggagcattgcgtactggatcatgaaggactacaccagagccctggacaca ctgctggagcagatttacaaaaaggatgatgagaaccctgatgtgctggtgaagtcgtgc aatcctgtcgtctttagtttctataactacttgcgcacacaccctctgatcattcgccgg cacttcgccaaccccgaggggtttgtggctgcagttggtctaacagagcgcaacagtgca gacgaaatcaatctgatagagcgaaagctcttcttcaccaccgctaatgctcactttaag gtgggctgcccactcctggcccttgaggtcttatccaaaatccccaaagtcactaagaaa gcatcttctttgagtaagggctcatctgtggccaacatcaatgctggccaaccacagcag aatggaggaaaggcttcagaacttgactggggagctcctgccatccccagccagacctgg ggagccgactcctccaccagcctggactggagtcaaccattggttaaattggaagatgag aatctacagttggactggggagatgataaggaggaagatgaggatgaagagggcgggctg accatgaaaaagccggaagtggaggatgaagactccaaaaagccatccaaatcagcagcc ctgcagcgtgaagactctgcgtgcgagtcggaggtggacgtgatcgccgaacagctcaag ttccgggcctgtttgaagattctcatgacagagctgcggacactggcgacaggatatgag gtggatggtggtaaactgcgatttcagctctacaactggcttgagaaagagattgaggcc gttcaccacatctgcaactataaggttgaggggaaagcgtccgtaggtcagctggagaaa tggggtggagatggatctcttgacctggaagactcacaaattcgtggtgaagcaggtgca tatgaacgtcaccagatggagcgacggcgtctgcaagccaagcagcttcatgcggagcgg aggaaagcctggctgaggaagaatcaggctctgctcagagtcttcctcagttactgcagt ctacatggggccaagggtggaggagtgacgtctgtcaggatggaactgctcttcctgctg caggaatcacagcaagaaatgacagtgaaacagcttcagtcaccactccccctccccacc actctgcccctgctgtcggccagcatcgcccccaccaagaccgtcattgccaaccccgtc ctgcaccttggaaaccacatacatgacatcctatacaccgttgtccagatggaggctccg ccacacccagacatagtggacgaccgggtgaatgctttacacactcttgctgcttctcta tcggcttgtatataccaatcactgtgtgacagccacagctacagcagccaggcggaggcc aatcagtatactgggatggtgtatcaggggctgttactgagcgacaggcgtagacttcgc accgagagcatcgaggaacatgcaacacccacctctgccccttcacagtggccaggtgtg tcgtctctgatcaatctgttggcgtgtgctcagggtgatgatcacgtgcgtctgaacgtc atgttatgtgaggctgtggtggccgtgtatctcagtctgctgattcacggtctcggcaca cactctggaaacgagctcttccggctggccgctcaccccctcaacaaccgcatgtgggct gccgtgtttggaggcggagccaaactcattgttaaacccaagcggccacctgaaatcact ccagcagtccctcccccgacccctcctgctgaggacgtagaccgacagcgacgcaggttt aacatgcgcatgcttgttcctggacgtcccgttaaagagactccagccacacctccacct gtccctgtagagcggcccacctataaggagaagttcatcccacctgagctcagcatgtgg gattactttgtggccaaacctttccttcccctctctgacagcggggcgctgtacgattca gatgagagcggtactagtgacaatgaggatgatgatgatgccttcctctctgacacacag atgacagaacactccgatccaaactcctacagttggtctctgatccgcctagtgatggtc aaacttgcccttcacaatgtcaagacgttcctgcccctgacaggactggactttacagag ttgccagtgacgtctcccctggccaatgctgtgctgaagacactggaaaactgggagcag attcttttggaaaagattaacaaatttgacggccctccaccaaactacatcaacacctac ccgacggacctgagtgcaggcggggggccggctatactccgacacaaagccatgctagag ccagagaacacaccgttcaagtcaaagcaccatctctccttccctgctcgccgtctgtgg catttcctggtcaaacaggaggtgcttcaggagactttgatccgatacatcttcactaag aaaaggaagcagagtgagtctttagatcatgtggaccacctcatacaaaacggcattact ggagctcgcaaaaacaacaaggtggaggctgatatgggttacccaggaggcaaagccaaa atcatccataaagaatctgacatcatcatggcatttgccattaacaaggctaacactaat gaaatagtgctggcgtccactcatgatgtccaggaagtggacgtgtccacgctgcttgca gctcagccttacacttggatcggagaagaatttgacaaggagtctcgcagctctgatgac gtggattaccgctcgtctcacaccaacatcgcccaggccagcactggtccctttgccccc caacagatggcagcgtcgtcctccatgccctggctgggcagcgggcagaccagcatgggt gccagtgtgatcatgaagaggaacctgaataacgtgaagagaatgacgtctcatcccatc tatcagtactatatgacgggagctcaggacggcagtgtaagaatgtttgagtggaatcgt ccacagcagctgatctgtttcagacaggccggaaacgctcgggtcacacgcctctatttc aactcacagggcaacaagtgtggcgttgcagatggcgagggctttttgagcctctggcaa gtcaatcagacttcctcaaaccccaaaccgtatttgagctggcagtgccacagtaaaagc tgctgtgattttgccttcattacatcctccagtctgatcgctacagcaggacagtccaac gatggcaggaatgtttgtttatgggacactctgatctctccaagtaactctatgatacac gcgttccagtgccatgagaatggtgcaacagttcttcagtatgctcctaaacagcagctg atcatcacaggcggcaggaaaggatttgtctgtatttttgacatccgtcagagacagctg ctccacacattccaggcacatgattcggccatcaaagctctggccatggattccactgag gacttctttgtcaccggctcagccgaagggaacatgaaggtctggaagttggcgggtaac agtctcatgcactccttcagcaccgagcacgctaaacagtccatattccgaaacatcggc gctggggtgatgcagatcgaaacctgcccaggtaaccggatctttacctgtggagccgac gggaccctgaagatgagggtccttcccgaccgctacaacattccggccagtatattccag atcctctaa

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