Ctenopharyngodon idella (grass carp): 127499893
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Entry
127499893 CDS
T08802
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
cide
Ctenopharyngodon idella (grass carp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127499893
NCBI-ProteinID:
XP_051726549
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Position
18:complement(7738078..7860813)
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AA seq
1077 aa
AA seq
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MGWRELTTDLLLLLLLMASHLEAVSFPEDNIPLDVVDRHYARQYPVFRGRPSGNESQHRL
DFQLMTQIHDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRETCAMKGKHRDE
CHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVAL
FADGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFF
REIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVL
QAITDIIDINGVPSVVGVFTTQLNSIPGSAVCAFSMADIEKAFRGRFKEQKTADSVWTPF
PEEKLPKPRPGCCAGHGSAESYKTSIEFPDETLQFIKSHPLMDASVPSIGDEPWFTKTRV
RYRLTALAVDNTAGPHKNYTVVFIGSEAGIVLKVLAKTSPLSLNDSVLLEEIDVFNQAKC
LSSNEDDRRVLSFHLDKDTHTLYVAFSSCVVRIPLSRCERHSSCQKSCIASRDPYCGWMS
HGACERIPAAMQNGYEQDVEYGNTAHLGDCHEFLATTSAPDFKSYGDPTSDMELPSSSVT
VPATSEPIQSPQTIPTQIPQLFGSRKFVLHDDPATSHSVEHIPGVLEGVWEIQAGESNQM
VHMNILISCVLAAFLLGAFIAGMVVYCYRDAFLRTPRKIQKDAESAQSCTDSTGSFAKLN
GLFDSPVKEYQPNMDSPKLYTNLLSNGREVPTTGDTKTMLLSGQPPELAALPTPESTPVL
QQKSLQPIKNQWERAHGKISSSRKDGPPKSPQFLPSSPPPHSAISNPHIPSAVVLPNATH
DNRASFSTPEGPQAEKKIQNSDQHGSKSGRKDQRRTVDARNTLNDLLKHLNESNPKAIMV
EMPKSRQHLMLEPIVSPTEIPPKVPSREASLYSPSSSLPRNSPTKRLDVPTTPTSPTGQM
GTLERQRYHRSSSQRHSISSPPKGLHSPSGAIVSRQPSMNRGGYMPPTPTPPTRLDSHGV
PMAMTPSVSRQSSYSGHGSLPRTSVKRTASLKPDVPPKPNGFAPQTAQMRAVNKYSY
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcgagaactgacgactgacctgctgctgctgctgctgctgatggcgtcccac
ctggaggccgtgagctttcctgaggacaacatccctttagatgttgtggacagacactat
gcacgacagtacccggttttccgtggacgcccctctggcaacgaatctcagcatagactg
gactttcagctgatgacccagatacatgatacactcttcatcgcgggcagggaccaggtg
tatttagtgagtctaagagagtcctacaggaatgagatcattccatacaggaagctgaca
tggcggtcggggcaggcggacagggagacatgtgccatgaagggaaagcacagagacgag
tgccataatttcattaaagtcctggttccgagaaatgatgatcttgtgttcatctgtgga
acaaatggtttcaaccccatgtgtcgttactacaggttggataacctggagtttgatggg
gaagagatcagcggtttggcccgatgcccatttgacgccaagcagacaaacgttgccctg
tttgctgacggtaagctgtactcggctacggtggcggacttcctggccagcgatgctgtg
atttatcgcagcatgggagacggttctgcccttcgcaccatcaagtatgactccaagtgg
ttaaaagaaccacatttcctccacgccgtggattacggggatttcgtctacttctttttc
agagaaatcgcagccgagcacaacaacttaggaaaggcggtttactccagagttgctcgg
atctgtaaaaatgacatgggagggtctcagcgggtgctggagaaacactggacatctttt
gttaaggctcgcctgaactgttctgttcctggagaatcgtttttctactttgacgtcctt
caggccattacggacattatcgacattaatggggtgccttctgtggttggagttttcacc
acccagctgaacagtatccctggatccgcagtgtgtgcattctccatggcggacattgag
aaagcgttccgtggccgtttcaaagagcagaagacagcagattcagtgtggacaccattt
ccagaggaaaagctgcccaagcccagacccggctgctgtgcaggacacggttcagcggag
tcctacaaaacctccatcgagtttccagacgagacccttcagttcatcaagtcacaccca
ctcatggacgcctcagtcccctccattggagatgaaccgtggttcaccaaaacaagagtc
aggtataggctaacggcactcgccgttgataacactgcaggaccccataagaattacaca
gtggttttcattggctctgaggcaggcatcgtgctaaaagttctggccaagacatccccg
ctgtctttaaatgacagcgtcctactggaggagattgatgttttcaaccaagccaagtgt
ttatccagcaatgaggatgatcggcgagttctgtctttccacctagataaagacacccac
acgctatatgtggccttttccagctgtgtggtcagaataccactcagccgctgcgaacga
cacagttcctgtcaaaagtcttgtattgcttctagagacccgtactgcgggtggatgtca
catggagcttgtgagcgtattcctgcagctatgcaaaatggttatgagcaagatgttgaa
tacggcaacacagctcatctcggcgattgtcatgaatttttggccactacatcagcgcca
gatttcaaatcatatggcgacccaacctctgacatggagttgccatcttcgtcagtcaca
gtgcccgcgacctctgaacccatacaatcaccccaaaccatccccactcagattccccaa
ctctttggctcacggaaatttgtgctccacgatgacccagccacttcacattctgttgag
catataccaggtgtgctggagggtgtgtgggaaatacaagcaggtgaatctaaccagatg
gtgcacatgaacatccttatctcctgtgtgttagctgcattcctgcttggtgcattcatc
gccggcatggtcgtttactgctatagagacgctttccttcgcactccacgcaagatccaa
aaagacgcagagtcagcacagtcctgcactgattctactggcagctttgccaagctcaac
ggtctgttcgacagtcctgtcaaagagtaccaacccaatatggattctcccaaactgtac
accaacctgttgagcaatgggagggaggtgccaaccaccggagacactaagacgatgctc
ctgagcgggcagccaccggaactagcagcactgcctacgcccgagtccacacctgtgttg
caacagaagagccttcagccaatcaagaaccagtgggagagagctcatggaaagataagt
agttcccgcaaagatggaccacccaaaagcccgcaattccttccctccagtccacctccc
cattctgccattagcaacccccacatccctagtgctgtggtactgcccaatgctacacat
gataacagggcatccttcagcactcctgaagggcctcaagcagagaagaagatccagaat
agcgatcaacatggttccaaatctggccgtaaagaccagcggcgcactgtggatgccagg
aacacgctgaacgacctcttaaagcacctgaatgagagcaacccaaaggccatcatggtg
gagatgccgaaatcccgacagcacctaatgctggaacccattgtaagcccaacggagatt
ccacctaaagtcccaagccgagaggcctccttgtactctccctcttcatctttacccagg
aatagcccgactaaaagactggatgtgccgactacaccaacatcacccacagggcagatg
ggaactctcgagagacagcgataccaccgcagctcttcccagcggcactccatatcctcg
ccgcccaaagggctgcactcacctagcggggccatagtgtcccggcaacctagtatgaac
agaggtgggtacatgcccccaactcctaccccacccactagactagactctcatggggta
ccaatggctatgacaccttctgtatcccgacagagcagctacagtggtcacggatcttta
ccacgaacatccgtcaaacggacagcatcgttaaagcccgatgtgccacccaaacccaac
ggttttgcaccacagactgcacaaatgagggcagtgaacaagtatagctactga
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