Ctenopharyngodon idella (grass carp): 127499923
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Entry
127499923 CDS
T08802
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127499923
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cide00537
]
127499923
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
Contactins
127499923
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cide00537
]
Others
127499923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Ig_C17orf99
C2-set_2
Pur_ac_phosph_N
Sp38
Interfer-bind
IMPa_N_2
Motif
Other DBs
NCBI-GeneID:
127499923
NCBI-ProteinID:
XP_051726598
LinkDB
All DBs
Position
18:6200722..6530674
Genome browser
AA seq
1093 aa
AA seq
DB search
MGSPWKPLLLLSVISGLADFARAVAGRPVSYAAVLRMKADSSSSSSLSSRMRLRNNYGMG
SPSQDWPPFSRHRFSALSSQEDYRSEESEEFGPVFIQEPDDAIFSLDTDDKKVIMNCEAR
GNPVPTYSWLINGTNVDAEADFRYSLIDGNLIINNASEAIDYGRYQCRAENSIGIILSRD
ALLQFAYLGAFSGRTRGAVSVREGQGVVLMCAPPPHSPAEIIYSWVFNELPSFVAEDSRR
FISQETGNLYISKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAH
FPQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSG
SYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLHWECRATGKPRPTYRWLR
NGEPLSTQSRVEMVNGELIIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPVFSTS
PVRLIATVGKDVSLECRPRASPKPRISWRKNDRRVQPSRRIILLRNNTLRIINSSRSDEG
SYVCRAENQFGSAELITMLLVKEPMRVELSPIRVEVTVGESVVLSCKVTHDPSLDVSFLW
LLNNQPLNTQQEGSHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEAELLV
RGPPGPPGVVIVEEITDTTATLSWSHGVDNHSPITTYNVQARSPVSLGWQTVKTDPDPVT
GSMESAMAVELNPWVEYEFRVVATNGIGTGDPSTPSRAVRTKEAVPSVAPANVRGGNGRR
HELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTTYKYRDETFPPLTPF
EVRVGVYNNKGDGPFSGVVTVFSAEGEPREPPSEVQGFAISSSEIKVTWKPPIPGPGRPQ
GYEVSFWKDVEQEETGKKKRTTGNETTMLVSGLEGNTQYLVSVKGFNSVGQGPASSAIKI
STKKNAPSLPPGNLMWIQEGNNVSLSWDPVKARDNESEVIGYKVLLRQEGRGHSQVMRTP
NSAVVLALPEGGTYIIEVRAVSEGGEGAASAQVRVLTSSGVRAKSGQLSVRNLPPGLAWT
ALFLSLMVPSFPL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccacttctcctgctgtcagttatcagcggcctggcagatttt
gctagagccgttgccgggagacccgtgtcatatgctgcagtgctgaggatgaaagcagac
agttcgtcatcctcctcgttgagctccaggatgaggttaaggaacaactacggaatggga
tcgcctagccaagactggcctccgttctccagacacagattctcagccctcagctcacag
gaggactacaggagtgaagagagcgaggagtttggtccagtgttcattcaagagccagat
gatgcaatcttctccctggatacagatgataagaaagtgataatgaattgtgaagccaga
ggaaaccctgttccgacctacagttggctgatcaatggaacgaatgtggacgcagaagca
gatttccgctacagtttgattgatgggaacttaataataaacaatgcaagtgaggccatc
gattatggaagataccagtgcagagctgaaaacagcattggcatcatcctgagtcgagat
gccctcctgcagtttgcctatctcggggcgttcagcggacggactagaggagccgtttcg
gtgagggaaggccagggggttgtgctaatgtgtgccccccctcctcattcgccagcagag
atcatctacagctgggtgttcaatgagctcccctcgttcgtggcagaggacagccggcga
ttcatctcgcaagaaacgggaaatctgtatatctccaaggtgcagccctcggacgtgggc
agctatgtgtgccaagtgaagaacactgtgaccaacgccagggtcctgagcccaccgacg
cccctgactctcaaaacagatggtgtgatgggggagtatgagcccaaaattgaagcgcat
tttcctcagacggtgctggcagccaaaggcgtcacagtgaggctggaatgctttgccctt
gggaaccctgtccctactatcacctggagaaagatgagtgggaacatcccaaaaaaagcc
cgtctgcgcaaatcacaggctgttcttgagatccccaacatccagctagaggattctggg
agttatgagtgtaaagctgagaacaccagaggaggcaccgccttcagaggacatctccag
gtctacactctgccgcagtggatcagcatgataaatgacactcaactggacagcggagag
cagctccattgggagtgtcgagccacaggaaagcccagacccacgtatcgctggctgcgc
aacggagaaccactcagcacacagagcagagtggaaatggtgaatggggagcttatcatt
cacagactacagcaggctgattctggaatgtaccagtgcatcgccgagaacaagtatgga
gccatctactccagcgcagagctcaaaatactggcatcagcccccgtgttcagcaccagc
cctgtccggctcatcgcgaccgttgggaaagacgtgtctctggagtgccggccacgtgcc
tcacccaaacccagaatctcttggaggaagaatgatagaagagtccagcccagccgaagg
atcatactgcttcggaacaacacccttcgcatcattaactccagccgctcggatgaggga
agctacgtgtgccgcgcggaaaaccagtttggatcagcggagttgattaccatgcttctg
gtgaaagagcccatgcgggtggagttgagccccatccgggtggaggtgacggtgggagag
agtgtggtgctcagctgtaaagtcactcatgacccctcgctggacgtgtccttcctctgg
ctgctcaataaccaaccgctcaacacccagcaggagggaagtcactttgagtacattcaa
acacagtcctccacagcagacctgatgatcagaagcatcctcctgaagcatgctgggaaa
tatggctgccgtgctcagacgagtgcggacagtgtacttgcagaagctgagctgctagta
agaggccctcctggacctcctggagtggtgattgtagaggagatcacggataccacggcg
acgttgtcatggagtcacggcgttgacaaccacagtccaatcaccacctacaatgtacag
gcacgtagccctgtctctctgggctggcaaacagtgaaaaccgatccagacccagtgaca
ggaagcatggagtctgccatggcagtggagctcaacccctgggtggagtacgagtttcgg
gtggtggccacgaacggcatcggcacaggcgacccgagcaccccctccagagcggtccgc
actaaggaagcagttccgtcggtagcccctgccaacgtgagaggtgggaacggccgcagg
catgagctggtcatatcctgggagcccgtctcagaagaattccaaaatggagaaggtttc
ggctacatcgtggcgttccgggccaatggcacacgtggatggaaagagaaaatggtgacc
tcagcagactccaccacctataaatacagagatgagaccttcccccctctcaccccgttt
gaggtgcgggtgggggtgtataacaacaaaggagacgggcccttcagcggggtggttact
gtgttctctgcagaaggagaacccagggagcctccttcagaagtgcagggattcgccatc
tcctcctccgaaattaaagtaacgtggaagccacccattcctggccctggaagaccccaa
ggctacgaggtgagcttttggaaagacgtggagcaggaggagacggggaagaaaaagagg
acgacagggaatgagacgaccatgttggtgtcggggctggagggaaacacacagtatctg
gtctctgtgaagggattcaacagtgtcggccaaggaccagccagctcagccatcaagatc
agcactaagaaaaatgccccaagtctacctccaggcaacttgatgtggattcaggagggg
aacaatgtttctttatcctgggatccagtgaaagcaagggacaatgagtcagaagtcatt
gggtacaaggtattattgcgtcaggagggacggggccacagccaagtcatgaggacacca
aactcagccgttgtcctggcactacctgaggggggaacatacatcatcgaggtgcgtgca
gtcagtgaaggaggtgaaggagccgccagcgctcaggtcagagtgctcacctcctcagga
gtgcgtgcaaagagtgggcagctctctgtccgtaatctgcctccaggcttggcatggact
gctcttttcctctcattaatggtgccttcttttcccttgtga
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