KEGG   Ctenopharyngodon idella (grass carp): 127500034
Entry
127500034         CDS       T08802                                 
Name
(RefSeq) LSM14A mRNA processing body assembly factor b isoform X1
  KO
K18749  protein LSM14
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127500034
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127500034
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 127500034
NCBI-ProteinID: XP_051726861
LinkDB
Position
18:15852337..15868200
AA seq 485 aa
MSGGTPYIGSKISLISKAEIRYEGVLYTIDTENSTVALAKVKSFGTEDRPTDRPIPPRDD
VFEYIIFRGSDIKDLTVCEPPKPTCNLPQDPAIVQSSLASTAGPTAPSFQSYAPFSRAPY
NQFSSSTLVSQPFGAAVTGGSSSGPAFGSEASTTAPLSQSSALPPHTRSLSAHKPEGRSS
PSVEHLRKTPTQEHAVQTAPVAPAAVTTSTASQRSPAAPRPALNTQKSAENQEQKASDVQ
KVPRPESDSNRPDNKDPNKRQSGGGAPPMRRGRGSGGGGGGGGQRGRGRFNGRRDGPMKF
EKDFDFESANAQFNKEEIDREFQSKLKIKDEKSEKSEKTLNGEEKTDSGVETQNSEGNVE
EEDPLGPNCYYDKSKSFFDNISCDDTRKEKSGGAFGRERRQTWAEERRMNAETFGIPLRH
NRGRGGFRGRGGGMGFRGGRGRAASRGSFMPSRGGGGGFRGGFRGGRGGREFSDFEYRKE
NKVAA
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgagcggagggacgccttatatcggcagcaagatcagtctgatctcaaaggccgagatc
cgatatgagggagttttatacacgatcgacactgagaacagcactgtagctctggctaaa
gtgaagtcctttggcactgaggatcgtcccacggacagacctatcccccctcgagatgat
gtctttgagtacatcatatttaggggaagtgacatcaaagacctgactgtgtgtgagccg
cccaaacccacctgcaaccttcctcaggatcctgccatcgtgcagtcctctctggcatcc
accgccggtcccacagctccttccttccagtcatacgcccccttcagtcgggctccgtac
aaccagttcagctccagtactctggtatcccagccgttcggagcagcggtcacgggtgga
agcagctcaggtcctgcgttcggtagcgaggcgagcactactgcccctctgtcccagagc
tctgctcttcccccgcatactcgttcactgagtgctcacaaacccgaaggtcgttccagc
ccatctgtggagcatttgaggaagaccccgacccaggagcatgcggtccagacggccccg
gtcgctcccgctgcggttacaaccagtacagcgagtcagaggagccctgcagccccccga
cctgccctcaacacccagaaatctgctgaaaaccaggagcaaaaagcgtctgatgtccag
aaggttcctcggccagaatcagattcaaacaggcctgataacaaagacccaaacaaacgg
cagtctggtggcggcgctcctcctatgagaagggggcggggcagtggtggcggaggtggc
ggcggcggtcagcgtggccgaggcaggtttaacgggcgtagagatggaccaatgaaattt
gagaaagactttgactttgagagtgccaacgcccagttcaataaggaagagatcgaccgc
gagttccagagcaaactcaagattaaagatgagaagagtgagaagtcggagaagactctg
aacggggaggagaagaccgactcgggtgtggagacccagaacagtgaaggcaacgttgaa
gaggaggatccactgggacccaactgttactatgacaaatccaagtccttctttgacaac
atctcctgtgacgacaccagaaaggagaaatcaggaggtgcttttggaagggaacggagg
cagacctgggcggaggagaggaggatgaatgcggagacgttcggtattccactgcgtcac
aatcgtgggcgcgggggtttccgtggtagaggtggcggcatgggcttccgtggcggtcgc
gggcgtgctgcgagcaggggctcattcatgccctcccgtgggggcggaggaggtttcagg
ggcgggtttagaggcggcagaggaggacgggagttctctgactttgagtacaggaaggaa
aacaaagtggcggcgtag

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