Ctenopharyngodon idella (grass carp): 127500154
Help
Entry
127500154 CDS
T08802
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03420
Nucleotide excision repair
cide04115
p53 signaling pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127500154
09124 Replication and repair
03420 Nucleotide excision repair
127500154
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
127500154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127500154
03400 DNA repair and recombination proteins [BR:
cide03400
]
127500154
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127500154
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127500154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
127500154
NCBI-ProteinID:
XP_051727064
LinkDB
All DBs
Position
18:complement(22411789..22419612)
Genome browser
AA seq
508 aa
AA seq
DB search
MARGRAQTDSTASKQAKNVNSKKRPNEEPPQTLSKKLKAKQQGKTASKTDTYIQASVKWT
GSQKKVGQTSILHYIYKSSLGQSIHAQLRQCLQEPFVRSLGTYKLHRTASPFDRRVTCLE
WHPTHPTTVAVGSKGGDIILWDYDVLNKRTFIQGKGAGDFIGEMKFCPTDVSKIFVASGD
GTISVQSFEGLQSQILSRTPDCGHDHHDLCYWYCCVDVSVSRQMLATGDSTGRLLLLGLD
GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKSSYIAEMPHEKPV
NSAYFNLTDSTKLLTTDQRNEIRVYCSYDWSKPDQIILHPHRQFQHLTPIKATWHPMYDL
IVAGRYPDDQVLVNDKRTIDIYDANSGDLVHQLRDPNAAGIISLNKFSSNGDVLASGMGY
NILIWNREDTLNSISRKQTAERVEESGGRAGTSRSQRSTQQRTNRGGRAAADDAKLKKKL
ASLSSTEAKSKTKTKSKTECKTSKLKKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaggaagggctcagacagactcaactgcttcgaagcaggcgaagaatgtcaat
tcaaagaaaagaccgaatgaagaacctcctcaaacactctccaaaaagctcaaagccaaa
cagcaaggcaagacagcatcaaaaacggacacctacatacaagcaagtgtgaaatggact
ggaagtcaaaagaaagtgggccaaacaagtatccttcactacatttacaaaagctccttg
ggacagagcatccatgctcaactgcgccagtgtctgcaagagcctttcgtacgctcactt
ggaacctacaaacttcaccgcacagccagtcccttcgatcggagagtcacttgtctggaa
tggcatcccacccatcccactactgttgcagtgggttccaagggtggagacatcatcctg
tgggattacgatgtgctgaataagagaactttcatacaggggaagggagctggtgacttt
attggggagatgaagttctgccccacagatgtgtccaaaatctttgtcgcttctggtgat
ggcacaatcagcgtgcagagttttgagggcctccaaagtcagatattgtctcgaacccca
gactgtggccatgaccaccatgatctttgttactggtactgctgtgtggacgtgtccgtt
agccgtcagatgcttgcgactggggacagcactggaagacttctcctgcttggcctggat
ggacatgagattttcaaagagaagctgcacaaagccaaggtgacccatgcagaattcaac
cctcgctgtgactggctgatggcaacatcctctgttgatgctacggtcaagctgtgggac
ctacgaaatattaaagacaaaagcagttatatcgctgaaatgcctcatgagaaacctgtc
aattctgcgtattttaatctgacagacagcaccaagctccttactacagaccagaggaac
gagatcagagtatattgttcatatgactggtctaaacctgatcaaataattcttcatcct
catcggcagttccagcacttaacgcccatcaaggcaacctggcatcccatgtatgacctc
attgtggctggccgttacccagatgatcaagtattagtcaatgacaagagaactattgac
atttatgatgccaacagtggtgatcttgtgcaccagctgagagaccccaatgctgctggt
atcatatctctcaacaagttcagttcaaatggggatgtgctggcttctggaatgggctat
aacattttaatctggaaccgagaggacacgctgaacagtattagtcgtaaacagacagcg
gagagagtggaggagagtggaggcagagctggaacctccagatcccagcgcagcacccag
cagcgcacgaacagaggcggaagagcagctgctgatgatgccaagctcaagaaaaagctg
gcgtcattgtcttcaacagaggccaagtccaagaccaagaccaagagcaagaccgaatgc
aagacatcaaaattgaagaaaaagtga
DBGET
integrated database retrieval system
