Ctenopharyngodon idella (grass carp): 127500162
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Entry
127500162 CDS
T08802
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127500162
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127500162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-TRAF
Sina_ZnF
DUF3417
Motif
Other DBs
NCBI-GeneID:
127500162
NCBI-ProteinID:
XP_051727076
LinkDB
All DBs
Position
18:complement(6080385..6085919)
Genome browser
AA seq
687 aa
AA seq
DB search
MGKNRTTSSGLHPHCEKCHNLHCKIPVDISKSCAFISCRLNCGAAFHLCKEDEHRLLCPK
ETVPCLNSGYGCPMTMTRQRLAKHLEVCPASVITCTLEWNRWPVNEADTAFYRNALQDPN
CMSQMDLAMALRDQKLLFSSIQMKTLFPELTEKTEEPEVPLDGAVGGVDPDHWESMNLNP
EEMLENSLNGEEVQELTQEERLALAKSKDVACLVNYGMWEKMFAKEKEGCKQTVKNLEDK
SCQSMDKDDPRVTPQNSHYDIARTGLAPWQDGVLDRLGKEANVAEYNMYLVHNGCMLINF
GQLAACTPKEKDFVYGNLEPIEVQTVRSFNIPKSYRAKRSHLKDPSQMVKKTHQNVDTSD
LGTAIEELPKANEVEATLLCALERELKGHQICETVGTDGLYVDIGTQTYDFHSAPFKSDA
SLADVVENQPQNLHVQIQTECVTRRHNKSCSAFTYLCCHAFRRDEYSWHFRNVHGDIQSC
LTGWFLQRCPLAYLGCTFSQKQFRPSKYQATVSYDTDLSTFILQPEVTASLYKGVRIANS
DRKRARNLDSLSRLPFEILQHIVSFLDSVSLGRLSQVSQLMREVCSTVLQQKGMVHLKWE
KKTYSHGGFTWRARKKAWEFSSLFSPVDKWVFDDMPPMAEHLKVCPFYQKEIRSEPVALP
SLTDLQERRGEFQTLVNSVLTVKAHRE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaataggaccaccagctctggtcttcatccacactgtgaaaaatgtcataac
ctgcactgcaagattcccgtagacatctcaaagtcctgtgccttcatttcctgcaggctg
aactgcggtgcagccttccatctttgtaaagaggatgagcatcgtcttctctgccctaag
gaaaccgtaccctgcctcaactctggctatggctgtcctatgacaatgacccgtcaaaga
cttgccaagcacctagaagtgtgtcctgccagtgtgatcacttgtaccctggaatggaac
cgatggcctgtgaacgaggccgataccgccttctacagaaatgccctccaggatccaaac
tgcatgagtcagatggaccttgctatggcccttagagaccagaagcttctgtttagctca
attcagatgaagacactcttccctgagttgacagagaagacggaggagcctgaagttcca
ctggatggtgctgtaggaggtgttgatccagatcactgggagtctatgaacttaaacccg
gaagaaatgttggagaatagtcttaatggggaagaagtacaagaactaacccaagaggag
aggctggctcttgctaagagtaaagatgtggcctgcttggtgaactacgggatgtgggag
aaaatgtttgcgaaggagaaggaaggatgcaagcaaactgtgaagaatttagaggataaa
agttgtcagagtatggacaaggacgacccaagggtgacccctcagaattcccactatgac
attgccagaacaggtttagccccttggcaagatggcgttcttgatagactcggtaaagaa
gccaatgtggccgagtataatatgtatctggtgcacaacggatgcatgcttatcaacttt
ggtcagctggctgcttgcacacctaaagagaaagattttgtttatggtaatttagagccc
attgaagttcaaaccgtacgctctttcaacattccaaaaagctacagagccaagcgtagc
cacctcaaggatccatcacaaatggttaagaagacacaccagaatgtggacacatctgat
ttaggcactgctattgaggagctcccaaaggcaaatgaggtagaagccacactgctgtgt
gcactagaaagagaactgaaaggtcatcagatatgtgagactgttggaaccgacgggcta
tatgttgacattggcacccagacctatgactttcattctgctccattcaaaagtgatgca
tctttggccgatgttgttgagaaccagccgcaaaacctacatgtgcagattcagaccgaa
tgtgtgactaggagacacaacaaatcctgctcagcctttacttacctgtgctgtcatgcc
ttcaggcgtgatgaatactcctggcactttaggaacgtgcatggagacattcagtcatgt
cttactggctggtttttacagcggtgcccactggcttaccttggttgtaccttcagccag
aagcaatttcgaccatctaaatatcaggctaccgtgagctatgatacagatcttagcact
ttcatcttacaaccagaagtgacagcgtcactttacaaaggagtaagaatcgctaacagt
gatcgcaaacgagcaaggaatttggattctctgagcagacttccctttgagatcttacaa
cacatagtgagttttctggatagtgtgtctttaggtcgtctatctcaagtttcccagtta
atgagggaggtgtgcagcactgttcttcagcaaaagggtatggtgcacctcaaatgggag
aaaaagacatattctcatggtggattcacctggagggccagaaaaaaggcatgggagttt
agcagtctgttctctccagtggataaatgggtctttgacgacatgccccctatggcagag
cacctgaaggtctgtcctttctaccagaaggagatccgaagtgaacctgtggcgttaccc
agcttgacagatctccaggagagaagaggagagttccagactctagtcaatagtgtcctc
actgtcaaggcacacagagaataa
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