Ctenopharyngodon idella (grass carp): 127500230
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Entry
127500230 CDS
T08802
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127500230
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127500230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
127500230
NCBI-ProteinID:
XP_051727179
LinkDB
All DBs
Position
18:19902510..19944641
Genome browser
AA seq
1810 aa
AA seq
DB search
MMKNKSKKQEDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSDRARSRRSESNSTSD
SESHFESGSESTGSKSRQTSTQAKDKPVRKKDNLADVKKVQKQMWEEHPDIYGVRRSSRS
RQEPARLNIGAEGSSDSEGESPKRKSSRQKKKENTWKDDDSKDEEDVEEEASSSESEQEE
KKVRSRRLPARRPQTKSSAGKQQPQKGRKQRKQESSDEEDEDDDDDEEEEEDTPKRQTRR
RTATKVSYKEDQNDFETDSDDLIEMAEGAEEQQDDDSETIEKVLDTRIGKKGATGASTTL
YAIEENGDPGADFDPEKEEGETQFLIKWKGWSYIHNTWESMDSLTLQKVKGIKKIENFKK
KNDELNAWLRKASPEDLEYYNCQQELTNDLSKQFQIVERVIATRTGKSQAHSDFPSHKTA
STEPEYLCKWMGLPYAECTWEDGALITKKFQACVESFQHRNACKTIPSKDCKVLKQRPRF
VALKKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFIVVVPLSTLTSWQREFETWAPDMNVVVYLGDVTSRKTIRDYEWIHQQTKRI
KFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGT
PLQNSLKELWSLLHFLMPDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFL
IKQPEEVENEKAQEHLQSLVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYL
SMKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKNTVEEDIIERAKKKMVLDHLVIQRMDTTG
RTVLDNNSANSNSNPFNKEELTAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRES
DQGSSATDELLSQFKVANFTMDESTPDLEERAVRDWDDIIPEEQRKKVEEEQKQKEMEDI
YMLPRSRSSNKKAQANDSDSDVGSKLKNRSSGSDSETDDSEDDKRPKRRGRPRARKNNVE
GFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNSCVTAVQEHE
EHMKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKSVPPNPAERSKFQLT
CRVKTPHFDVEWDIHDDTQLLLGIYEHGYGNWDLIKTDPDLKLSEKILLDDPDKKPQGKQ
LQMRADYLLKMLKKEQESQDAIKAGDEPKTKKRKPRIKNKAPNNDLVNEIASPRLSDNPS
EEGEVKDDGAEKSPTKKKQKKDNKENKEKTGTTKKEKEGDKDKRRSKSRKEKAKPGGKGK
KAQGPVHITAGSEPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQ
HTRTCLLKIGDRITECLKSYNDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRS
QEEEKEHRKKDDPARKKPFRPEPSGSSRDSTGAQPTTKPHPSVNHPPGPPSHAHHREQYN
QPNKRHFPNDDRGEWQRDRKYSYPGNSNQPWQGDRHHPYEPHRYKDHHYGDRRPHDYRSG
GYRNSGSPRKRTYDQYGNDRDHRGHRDYYDRHPDPKRRRSDEYRSPNYHQGGGGHPQDFR
RMPDHRGPPGNHGPMGPDHYRPFHPDKPPPLIDPRSPQSQKSPLESISPALDRTAEQKPV
TDFNWNNRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagagtaaaaagcaggaagatgaaggctcaactcaaagcaatgcttcc
agcaattcagcatcagaggaatctaaccgctcgggatcagagtccgggagtcagtcggag
agcgagcaaggaagtgatagagctcgttcccggcgttccgagtccaacagcacctccgat
tctgagagccactttgagtcagggagtgaatccactgggtccaaatcccgtcagacctca
acacaggccaaagacaaaccagtccggaagaaagacaacctggcagacgtgaagaaggta
caaaaacagatgtgggaggaacatccagatatttatggtgttagaagatccagtcgcagc
agacaagagcctgcccgcctcaacatcggagctgagggcagcagtgattcagagggggaa
agtcccaaaagaaaaagctcacggcagaaaaagaaagaaaatacctggaaagatgatgac
tcaaaagacgaagaggatgttgaggaagaggccagcagttcagagagtgagcaggaagag
aaaaaagttagatccagacgacttcctgctagaagaccacagaccaaatcatctgctggc
aagcagcagccacaaaagggccggaaacagaggaagcaggaatcctcggatgaagaagat
gaggatgatgacgatgatgaggaagaggaggaggataccccaaagagacaaacaaggcgg
cgaacagcaactaaagtcagttacaaggaggaccagaatgatttcgagaccgactctgat
gaccttatcgaaatggcagaaggagccgaggagcaacaggatgacgacagtgagaccatc
gagaaggtccttgataccaggattggcaagaaaggagctaccggagcttccacaaccctc
tatgctattgaggaaaatggggaccctggagcagactttgaccctgagaaagaggaaggg
gaaactcagttcctcatcaagtggaaaggctggtcctacatccacaacacctgggagagt
atggattccctcactcttcagaaagtcaaagggataaagaagatagaaaacttcaagaag
aaaaacgatgagcttaacgcttggttgaggaaagcgtcacctgaagatttagaatattac
aattgccagcaagaactaaccaatgacctgagcaagcaattccagatagtagagagagtg
atcgccacaagaacagggaaatcacaagcacattcagattttccctcccataaaaccgct
tccactgagccagagtacctgtgtaagtggatggggctgccgtatgcagagtgcacatgg
gaggatggtgctttaatcacaaagaaatttcaggcctgcgttgagagtttccaacacaga
aatgcctgtaagacaatcccctccaaagactgcaaggtgttgaaacagaggccaagattt
gtggccttgaagaagcagccttcttacattggagatgagaaccttgaactcagagattac
cagctagatggagtgaactggctggcccactcctggtgcaggtgtaacagtgttatcttg
gctgatgaaatgggcctgggaaagaccattcagacgatctccttcctgtcctaccttttt
catcagcaccagctttatggtccctttatcgtggtggtgcccttgtcaacccttacctcc
tggcagagggagtttgagacttgggccccagatatgaatgtagtggtgtacctgggagac
gtcacaagtagaaagacaatccgggactatgaatggatacaccagcagacaaaaaggatc
aagttcaatgcacttttgaccacatatgaaattctactgaaggacaagggagtgctaggg
aatataaactgggctttcctcggagttgatgaagctcaccggcttaagaatgacgactcg
ctgctatataaaactctgatcgactttcgatccaatcacaggctgctcattactgggacc
ccactgcagaactcgctcaaagagctgtggtcccttctgcactttcttatgcctgacaag
tttgagtcctgggaggattttgaggatgagcatggtaaaggcagggataatggatatcag
agccttcataaagttctggaacctttcctactgcgtcgtgtcaagaaagacgtggagaaa
tccttgccggctaaagtggagcaaatcctcagagttgacatgtctgcccagcaaaaacag
ttctacaaatggatactaacaagaaactacaaagccttgtccaaaggcaccagaggcagc
tcttctggctttcttaacattgtcatggagctgaagaagtgttgtaaccatggtttcctc
atcaaacaaccagaggaggttgagaatgaaaaagcacaagagcacctacagagcttggtg
cgtggcagtggaaaactggttctcctggacaagcttctcacacgactgagggagagaggc
aaccgtgtgctcatcttctctcagatggtccgcatgttggacatcctggctgattacctg
tctatgaaacgatatccattccagcgtttggacggctccatcaagggagagatccgaaaa
caagcactggaccactttaatgctgaaggctctgaggacttctgtttcctgctgtccacc
cgagctggaggtcttgggattaacctggcctctgccgacacagtggttatctttgactca
gactggaatccacagaatgatcttcaagcccaggccagagcccacaggattggccagaaa
aagcaagtgaatatctatcgtctggtcacaaaaaacactgtggaggaagacattattgaa
agagcaaaaaagaagatggttctagaccatcttgtcattcagagaatggacacaactggg
cgaaccgtattggataacaactctgcaaattcaaattcaaatcccttcaataaagaagaa
ctgacagcaatcttgaagtttggagcagaggatctgttcaaggaacctgagggagaggaa
tcagaacctcaggaaatggatattgatgagatcttgcggcttgctgaaaccagagagagt
gatcagggatctagtgccactgatgagcttctgtcacagtttaaggtggctaactttacc
atggatgaaagcacaccagatcttgaggagagggctgtgcgtgactgggatgatataatt
ccagaggagcagcggaagaaggtggaggaagagcagaagcagaaggagatggaagacatc
tacatgctgcccagaagcagaagctccaacaagaaggcgcaggccaatgacagcgacagt
gacgtgggatccaaactgaagaacagatcctcaggttcagatagcgaaacagatgacagc
gaggatgacaaaaggcccaagcggagaggcaggccaagagctcgcaaaaacaacgtggag
ggatttactgacgcagagatccgcaggttcataaaggcatacaagaagtttggagctcca
cttgagaggttggaggcgattgcccgtgactctgagctggtggataagtccattgcagac
ctgaagcgactgggggaactggtacacaacagctgtgtgactgcagtacaggagcatgag
gagcacatgaaagaaaaccctgtggaagcgaaagggccagggaaaagacgaggcattaac
ataaagatctctggagttcaggttaatgcaaagtccattatccagcatgaagaggagttt
gaaccgctgcataaatctgtgcctccaaatcctgctgaaaggagcaaatttcagcttacc
tgtcgggtgaagactccgcactttgacgtagaatgggatattcatgacgacacacagctg
ttattgggtatctatgagcacggctacggcaactgggacctgatcaagaccgatcctgat
ctcaaactttctgagaagattctcctagatgaccctgataagaaacctcagggaaagcag
ttacagatgcgagcagactacttgcttaagatgctgaagaaagagcaggaaagccaagat
gctattaaagcaggagatgagcccaaaaccaaaaagaggaaacctcgaatcaagaacaag
gcccctaacaatgatctggtcaatgaaattgcctctcctcgtctctccgataacccatca
gaagagggagaagtgaaggacgatggagctgaaaaatcacccacaaagaagaaacagaaa
aaggataacaaagagaacaaagaaaaaacaggaactactaaaaaagaaaaggagggggac
aaagacaaaaggcgctccaagtccagaaaagagaaggccaaaccaggaggaaaaggaaag
aaagctcagggccccgtgcacattactgcaggaagtgagcctgtaccaattggagaggaa
gatgatgagctggaccaggaaacattcagcatttgtaaagagcggatgaggcctgtgaag
aaggctctgaagcagttggataagccagacgaggggctgtcggtgcaggagcagctgcag
cacactcgcacctgcctgctgaagatcggagaccgcatcacagagtgccttaaatcgtac
aatgaccctgagcacgtcaagacctggcgcagaaacctctggatttttgtgtccaaattt
actgagtttggcgcccggaaactgcacaagctgtataagatggctcaaaagaagcgctcg
caggaggaagagaaagagcataggaagaaggatgatcctgccaggaaaaaacccttcaga
cctgaaccgtctggatctagtcgagattctaccggtgcccagcccacaaccaaaccccat
ccttcggtcaaccatccacctggacctccctctcacgcccaccacagagagcaatacaac
cagcccaataaaaggcactttcctaatgatgataggggagaatggcaaagagaccgtaaa
tacagctacccaggtaacagcaatcagccctggcaaggggatcggcatcacccatatgag
cctcacaggtacaaggaccatcactatggcgaccgtcgtcctcatgactaccgctcagga
ggttaccgtaacagcggttcccctcgcaaacgaacctatgaccagtatggtaacgataga
gatcatcggggccatcgagactattatgacagacatcctgaccctaagaggaggcgttcg
gatgagtaccgctccccgaactaccaccaagggggaggagggcatccacaggacttcaga
aggatgcctgaccacagaggaccccctggaaaccatggccccatggggcctgatcactac
cgccccttccacccagacaaacccccacccctgattgacccccgttcccctcagtctcag
aaatccccacttgagtcgatctcacctgctttggatagaactgcagagcagaaacctgtg
acggactttaattggaacaacaggaagacgtga
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integrated database retrieval system
