Ctenopharyngodon idella (grass carp): 127500247
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Entry
127500247 CDS
T08802
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127500247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127500247
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
127500247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
127500247
NCBI-ProteinID:
XP_051727261
LinkDB
All DBs
Position
18:complement(4844388..4858645)
Genome browser
AA seq
1821 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETQLDTDDLLDGSSDPSSSFFSSSGGHIPEVQPQ
AQLSTNEPGLPRVSVDLDFLEDDDILGGSPGGDNGSNGVGANHEPCDILQQSLAEANITE
QSLQEAEAELDLSSFGLTGLTQVVQPLPDAGLSGVGIGGATQIFPNQGNPNAPSNATPDM
LGSVLAHPGLQLQPQVMNKAISVQPFVQQVGLGNVTLQPISLPNGSQSGPLGIGQIQVVG
QPTVMTINPSGQQILAKTMGGYQLHQPGPEAASAGTQAGLGGSVLSSGGGLLIQGGKPTL
GSPALNGPAVCLSNTNTNNSATTMATAGGIVGFGNASLGAGIGSQTQSQGQIMQNVIIQR
TPTPIQPKPPQGGAIQPKIFKQQQQLPAPHALPNDANKALGVQQIPVSAGQNVTFLPGKP
VSNVVLSAQAASQGTQFSQALLRQQGPQTSGKPLSVHLLNQQGSIVIPSQTVLQGQNHQF
LLPGLQAGGQILTQHPGGHIITSQGPGGQIIANQILTANQNINLGQVLASQGHPGAHILS
GHIQLQHGQMGQPTLFQMPVSLAQTQTQAHPVTGHVQTVIQGMPIQNSLSMESLSPAVSL
QTLEQSGGIPNNGSSGSTAMAPCQPGEGITVLGGSTDPAAQPAQTQPQPSILTVQTTAPV
SVAASVPSSSSPSPTMATSTASMVGLGSQAQHSPGKVLFTSPGSSMILSQESLQMFLQQD
QQQQAGKDPPAAVGVPASVIVSGSSSGPAPSGHDNLLAETRQRQSPSPSLGPAHMATVVN
KVPSAAHSQTIKIQSASPSQPVVTPTPTPTLSDSPQPAQVSPLTLGQQIQSPHQHQQSRP
PSQPQPQSQAQTPSRSCTPSSLPPLFIIHNQIGGSPQPPQPAPPPQQQQPQQIQVQLQPQ
VLPQTLPQPTTLQPDMPPSSCSPKPPQPLPAQFQFQPAASSSPAAVVKQQVTVVPGLTAE
QQHHLQLVSAQLQTMSSITQPSPQQKQLLEKLHQVQQNILLQAKQQAQAQVQASQQQATN
QFNKMPDPPSVQAATSVASGTIQAPVQSLLQQKSVLVKSSTTGANDTQVFSAVSAGATAN
QGVTTPNLAQAVQAKPGVISSVGGLTLGKAGLQIQVLGAGLSQMPAPPPPAPQTQTSLKR
PFSMEPSKEARMLEQLRKQQGSVLHPDYSSPFRSFEDTLHRLLPYHLYQGMASSPGDYRK
VDDEFENVSSQLLKRTQAMLDKYRHLLFEESKQRLGPSAEMVMIDRMFIQEEKVALSQDR
VLAKEKPEEFVANSCLLDSTAVRPVQVDLSSVRTASSSAVAGPPAAAALALAPAAAVAPA
PTTTPAPTPAAAPTPASTPAPFPPTKLVIKQGGGGASVSWSTSSTPTPAPVVRPSVEPVT
PSASFSRTPSSRPADDDDDVALPQRTSKPPIKTYEARRRIGLKLKIKQEAGFSKVVHNTA
LDPVHSQSQLTPQPPTPEQPQKVKTHVTPPTTVIRTPPPTSYPTPSSTVTTVTTHTGSTS
TTSCSGATPSFSSWSSSSPSTSTAQMNGTLEHHEVGGVKRNPASTATPPLTTCRLPLRKT
YRENISPRHRPGVPGGGGDTLPILPAGPPLTSSPQPQGSSPQPERTVIASVKLERQGGHG
RSHPHTESQSLTAVEDVLYRGIKNAYQHHREFSDKEDEDEAEEGGGLGRLKAIGSKYREG
GRGTFRMDQHAPGPPSPGESSCTRDSSLPAKRCKSDSPDMDNASFSSGSPPPDDSLNEHL
QCAIDSILNLQQGPPGHGGSGRGALGRVHGPNLPNQHQTHPSYRQSIPPLSTPPSSTPMS
QHPQVGGRGQNGNLVSQTHSR
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgcttgctagatgtaatttgtgacccagaagcactcaat
gattttcttcatggatcagaaacacaactggacactgatgaccttttggatggctcaagt
gacccgtccagctcattcttctccagctctgggggccacattcctgaggtccaaccacag
gctcagctgtcaacaaatgagccaggccttccaagagtcagcgttgatttggacttcctg
gaggatgatgacatcttggggggatcgccgggaggagacaatggaagcaatggtgttggg
gcaaatcatgagccctgtgacattttgcagcagagtctggcggaggctaacatcacagag
cagagccttcaagaggcagaagctgagcttgaccttagttcctttgggctaactggccta
acgcaggtggtccaaccgctgcctgatgctggcctgtcaggggtgggcattggaggtgca
actcagatttttccaaaccaaggcaaccctaacgcaccctcaaatgccaccccagacatg
cttggctcagtcctggctcatccaggtctgcagcttcaaccccaggtcatgaacaaggct
atcagcgtccagccgttcgtacagcaagtcgggcttggaaatgtaacccttcagcctatt
tccttgccgaatggcagtcagtctggaccgttgggcattggacaaattcaagttgtgggc
caacccactgtaatgactataaatccatcggggcagcagatcttggcgaaaaccatgggt
ggctaccaactgcatcaacccgggcctgaggcagcaagcgctggaacgcaggctgggctt
ggaggctctgttttgagttcaggaggtggacttttaattcaagggggcaaacccactctt
gggtcccctgccttaaatgggccagctgtctgcttaagcaacacaaataccaacaacagt
gcaactacaatggccactgctggtggcattgtgggtttcggtaatgcctctctgggtgca
ggaattggatctcaaacccagtctcaaggccaaatcatgcagaatgtcatcatccagcgg
acgccaacgccaattcagcccaaacctcctcaagggggtgccatccaacccaaaatcttc
aagcaacagcaacagcttcctgccccacatgccttgccaaatgatgctaataaggctctg
ggggtgcagcaaatcccagtgtcagctggtcagaatgtaacgttcctccctgggaagcct
gtctcaaatgtagtcttgagcgcacaggctgcatcacagggaacgcagttttctcaagcg
ctcttaaggcaacaaggcccccaaacgtcgggcaaaccgctcagtgttcacttgttaaac
caacagggcagcattgtcattccctcgcagactgtcctgcagggccaaaaccaccagttc
ctcttaccagggcttcaggcaggaggtcaaatcctgactcagcatcctgggggtcacatc
atcaccagtcaggggcctggggggcagataattgctaatcagatcttgacagccaatcag
aacatcaacctgggtcaggtgttggcctcacagggtcaccctggggcccatattctctct
ggacacatccagctccagcacgggcagatgggtcagcccacgctgttccaaatgccagtg
tcattggcgcaaacgcagacacaagcccatccggtaacgggccatgtacaaacggtcatc
cagggcatgcctatacagaattccctgtccatggagagccttagcccagcagtcagttta
cagacgttggagcagtctggtggcatccccaataacggtagcagtggatcgacagccatg
gcgccgtgccagccaggagagggaatcacggtattgggcggctctacggaccctgctgct
caaccagcacagacccaaccgcaaccctcaattctcacggttcagacgactgcaccggtt
tcagtagcagcttcggttccttcctcttcatctccatcccccactatggccacatccaca
gcctcaatggtgggtttgggttcccaggcccagcacagcccaggaaaggtgttgttcacg
tcacctggttccagcatgatccttagtcaggagtctcttcaaatgttcctgcagcaggac
caacagcagcaagcaggaaaagacccacctgccgctgtgggtgtacctgcatctgttatc
gtcagcggcagcagttctggtcccgccccttcaggccatgacaacttgttagctgagact
cggcagaggcagagtcccagcccttcccttggccccgcccacatggcaacagtggttaac
aaggttccatcggcagcacattcacagactataaagatccaaagcgcatccccatctcaa
cctgtggtcacccctacaccaacacccaccctgtctgacagccctcaacctgcccaagtt
tctcccctcaccctcgggcaacagatccagtctcctcaccagcaccagcagtctcggcct
ccgtcgcagccccaacctcagtctcaggcgcagactccctcacgctcctgcacaccttcc
tctttaccgcctctcttcatcatacacaatcagatcggaggttctccacaaccaccacag
cctgctcctccaccacagcaacagcagcctcagcaaatacaagtgcagctccagcctcaa
gttcttcctcagactctgcctcagcctaccaccctgcagccagacatgcctccttcctct
tgctcccccaagcctccacagccacttcccgcacaattccagttccagcctgctgcgagc
tcgtctccagctgcagtggtgaaacagcaggtgactgtggtgccggggctgactgcagaa
cagcagcatcacctacagctggtcagtgcgcagctgcagaccatgtcatccatcacacag
ccctctcctcaacaaaagcagcttttggaaaaacttcaccaggtccagcaaaacattctc
ctacaggctaagcagcaagctcaggcacaagtccaggcctctcagcaacaggctacaaac
cagttcaataaaatgccagatccgccttcagtccaagctgcaacttcagtggccagtggc
accatccaagcaccagtccagtcccttctgcaacagaagtctgtgcttgtcaagtcctct
actacaggtgcaaatgacactcaagtattttctgctgtgtctgctggggctacagcgaac
cagggagtcacgactccaaaccttgcacaggcagttcaggcaaagccaggagtcataagt
tcagttggtgggctaactctgggtaaagcaggtttgcagattcaggttttaggtgctgga
ctctctcaaatgcctgcacctccaccacccgctcctcaaacacagacgtcattaaaaagg
ccctttagtatggaaccaagcaaagaagctaggatgctggaacagctgcgaaaacagcaa
ggctcggttctccatcctgactacagctctcctttccgctcatttgaggacacacttcat
cgactgctgccgtaccacctgtatcaaggcatggcttcatccccgggagactaccgcaaa
gtggatgatgaatttgagaatgtctcaagccaactcttgaagcgcacacaagcaatgctg
gataaatatcgtcacttgctttttgaggaatcaaagcagaggctgggtccctctgcagag
atggttatgattgaccggatgttcattcaagaggagaaggttgctctgagtcaggaccgg
gttctggccaaggagaaaccagaagaatttgtggccaattcctgtttgctggacagcact
gcagtgaggcctgtacaggtggacctaagttctgtaagaacagcatcatcatcagcagtt
gcaggtccacctgcggcagccgcacttgctttagctccagccgcagctgttgcccctgct
ccaaccacaacccctgcacctactccagctgctgcccccactcctgcttctacccctgca
cccttccctcctaccaagctggtgatcaagcaaggtggagggggagcatcagtgtcctgg
tccaccagttcaacccctacgcctgctcctgtggtccggccgtctgtggagccagtcacg
ccaagcgcctccttcagccgcactccgtcctcccgccctgctgatgacgatgatgacgtg
gcgcttccccagcggaccagcaaaccacccatcaagacctacgaggcacgccggcgaata
ggtttgaagctgaagatcaaacaggaggcggggtttagtaaggtggttcacaacactgcc
ttagatcctgtccactcccaatcccaactcacgccacaaccaccaacccccgagcagccg
cagaaagtcaaaacgcatgtaaccccacccaccactgtcattagaactccacccccaact
tcttaccccaccccctcttccactgtcactacggtaacaacacacacaggttccacctcc
acaacttcctgtagtggggctacgccctcattctcctcctggtcttcttcatccccttcc
acgtctacggcgcagatgaatggcactctggaacaccacgaggtaggtggggtcaaacgg
aacccagcatccacagcaactcctccactgaccacttgccggctccctctccgaaagacg
taccgtgagaacatcagtccacgtcacaggccgggagtaccaggtggaggtggagataca
ttgcccattctgccagcaggaccccctcttacctcttccccccagccacaaggctcctcc
cctcaacctgaacggactgtgatagccagtgtgaaactagaaaggcagggcggacatggg
cggtctcacccccacacagagtcgcagagccttacagcggtggaggacgtcctttaccgt
ggcatcaaaaatgcgtaccaacaccacagagagttctcagacaaagaggatgaggacgag
gctgaggaaggtggtggtctggggcggttgaaggccatagggagcaaataccgagaggga
ggaaggggtaccttcaggatggatcagcatgcccctggcccaccttctcccggagagtct
tcctgcacaagagactcctcacttcctgccaaacgctgtaagtcagactctccggacatg
gacaatgcaagcttctccagcggtagcccgccacccgacgactcattgaatgagcacctg
cagtgtgccatagacagtatactgaacctccaacagggccctcctggacatggaggctca
gggagaggggctttagggagggttcatgggccaaacctgcctaaccagcaccaaacccat
ccttcctacagacagtccatccctcccctctccacgcctccatcatccacccccatgtcc
cagcatccacaggtagggggccgaggacagaatggaaatctggtttcacagacgcacagt
agataa
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