Ctenopharyngodon idella (grass carp): 127500265
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Entry
127500265 CDS
T08802
Name
(RefSeq) caprin-1b
KO
K18743
caprin-1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127500265
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127500265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
CHD1-like_C
Motif
Other DBs
NCBI-GeneID:
127500265
NCBI-ProteinID:
XP_051727288
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Position
18:18100540..18116565
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AA seq
693 aa
AA seq
DB search
MPSATNGTRTVKSASPDLGSAPGSMNQITASNQLTGTQSEAMKQVLVVLEKKVRNMEKKK
SKLDDYQARNSKGERLNQDQLEALSKYQEVIHNLEFARELQKSFLALGQEIQKTVKKAAR
REQLQREEVEQKRLKRVLELQFLLDRLGDESVRQELLQGAGGPSLLTESDLTSLDEFYKL
VGPERDQNIRLTDQYQEASQHLRELLEGKDKPVAGTTYKALNETLERVLQSGYFDRVQSH
QNGVCAEEEEQTAAVEVSEAEEHPPDAEAEVTEEYAEPIPIEATEFVNRQFVSESTYSTG
DKEQIEEWSAETEVVNSMQQPVQTTPSPVVPEPHPLTTITPTPPSDPVIRQQVVQDLMAQ
MQGPYNFMQDSMLEFDGQSLDPAIVSAQPMKPASNMEMPPMVCQPAHPESRLAQPPAVGI
QPEPTQIPMVSPPETFSTPPPMYQSSHTADPRPQTDSMDPIQASIPLTEQPPPSTALPPA
SQTQVIQPGSKPLHSSGINVNAAPFQSMQTVFNLNAPVPPVNDTDSIKQASQYQNSYSQG
FNSQTQHPVEQTDMPPEQLQSVVGPFHSQDQSLANSTGHQPMSQQPGGQGNGFSRQAQSF
YNSRGMSRGGPRGSRGMMNGYRGQSNGFRGGYEGYRPSFSNSANSGYGQTQFSTPRDYSN
GNYQRDGYQQNYKRGAGQGTRGISRGNAQAMRS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcaacaaatggcaccaggactgtgaagtctgccagcccagacttgggatct
gctcccggatcaatgaaccaaatcacagccagcaaccagctgactggaacccaatcagag
gccatgaagcaggtgctggtggttcttgaaaagaaagtgcgcaatatggagaagaaaaag
agcaaacttgatgactatcaggccaggaacagcaaaggggaacgtctcaaccaggaccag
ctggaagccctgtctaagtaccaggaagtaatccataaccttgagtttgcacgggagctg
cagaagagctttttggcattgggtcaagaaatccagaagaccgttaagaaagcggcacgt
cgtgagcagctccagcgtgaagaggtggaacaaaaaaggctgaaacgggttctggagctg
cagttcctccttgaccgactcggggatgaaagcgtgcgacaagagctgctgcaaggagcc
ggagggccttcgctgcttacggagagtgaccttacttccctggatgagttttacaagctt
gtggggcccgaacgtgaccaaaacatcaggttgactgaccagtatcaagaagcatcacag
cacttacgggaacttttggaggggaaggacaagcctgtagcaggaacaacatataaagca
ctgaatgagacgttggagcgggttttgcagagcggctactttgatagagtgcagtctcat
cagaacggagtttgcgcggaggaagaggagcaaaccgctgcggtggaagtgtctgaagca
gaggagcaccctcctgatgcggaggctgaagtgacagaagagtatgcagaacccattcca
attgaggcaacagagtttgtaaataggcagtttgtttcggagagcacatacagcactggt
gataaggagcaaatagaggaatggagtgcggaaactgaggtggttaactccatgcagcag
ccggttcaaaccacccctagccctgttgtcccagagccccacccactgaccacaataaca
ccaacacccccttcagaccccgtgattagacagcaggtggttcaggatctcatggcacag
atgcagggtccatacaacttcatgcaggactccatgcttgaatttgatggacagtctctt
gatccagctattgtatctgcacaacctatgaagccagcctcaaatatggagatgcctccg
atggtgtgtcaaccagctcacccagagtctcgtctcgcacaacctccagctgttggcatt
cagcctgaacccacacaaatccccatggtttctccaccagaaaccttctccacacctccc
ccaatgtaccagtcctctcacacagctgatccacgaccacagactgactccatggatccc
attcaggcctccatacccctgacagagcagccgcctccatctacggcgctccctcctgcc
tcccaaacccaggtgatccagcctggatccaaacccttgcacagcagcggaatcaatgtc
aacgcagccccgttccagtccatgcaaacggtgttcaaccttaatgcgcctgtcccacca
gttaatgatacggactcaataaagcaggccagccaataccagaatagctacagccagggt
tttaatagccaaacgcaacaccctgtggagcagacagacatgccaccagagcagctccag
tctgtggttggtcccttccattctcaagaccagtcgctcgcaaactccactggccaccag
cccatgtcccagcaaccaggaggccagggcaacggcttcagccgccaggctcagtccttc
tacaacagcagagggatgtctcgtggcggtcctcgtggctcgcgtggtatgatgaatggc
tacagaggacaatccaatggattcagaggtggatatgaaggttatcggccatccttctca
aactctgcaaactctggatatggacaaacccagttcagtacgccgcgcgactattccaac
ggcaactatcagcgggatggttaccaacagaactataaacgtggcgctggccaagggact
cgagggatcagtcgaggaaacgctcaagccatgcgatcttaa
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