Ctenopharyngodon idella (grass carp): 127500291
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Entry
127500291 CDS
T08802
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide05100
Bacterial invasion of epithelial cells
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127500291
05100 Bacterial invasion of epithelial cells
127500291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127500291
Membrane trafficking [BR:
cide04131
]
Endocytosis
Macropinocytosis
Others
127500291
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127500291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SOS1_NGEF_PH
RHG20_PH
SH3_9
ECT2_PH
PH
DUF3695
Motif
Other DBs
NCBI-GeneID:
127500291
NCBI-ProteinID:
XP_051727336
LinkDB
All DBs
Position
18:complement(35009214..35066393)
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AA seq
899 aa
AA seq
DB search
MDIGNEVDLSNSNITPLWKRRSENNMKPKPRPHSYQIDGVLMTDFPADDRCMFTLTQQAE
KISTTASNTTVLKHTLNKPTKKTRVVRSISIGYLSNGRFSLSNFTKSDNDKNAEATSSPK
TPLLPTKNGNGLSVWHDITEPLKRLSSQLTLTSQRDQIVFGDASPPPDTVSPKPITSNIS
PQISTRSRQSQDVPGSPIGLRSSPLHSSTSSIPSISSNLSLPLDPLTPCSPSPAERPGGI
LLQRQSSGSSQGSEGKQPPSPIILSTHSPAAQKMGTQQIIPRGLVSDSRFSKPSQKFMDT
GKGAFRPRSMFETSSFSTSKDDELDRDENAGLLTRGQRSKSYRRAMFSGVDIDILSLDPK
AKRLSQPVLKGVAEERQSNPSPYKSKNVERKKGLPTQRTFDSEEDEVLYQNYQEKALHND
SDEDTEPKQPQPDKGIVVQYKPIRTSWSQLSVVKKSGKCEMLSQEERKRQEAIFEVISSE
HSYLHSLEILVRLFKNSNELSETINKTDHHHLFSNIVDVCEASKKFFKELEDRHQQNIVI
DDISDIVTRHAQSNFDPYVTYCSNEVYQQRTLQRLLNKSSSFKEVLTRIEAHPDCRNLPM
ISFLILPMQRVTRLPLLMDTICQKTPNDSAFYEACKKALHAVSKLVRKCNEGARTMERTE
MMYTINSQLEFKIKPFPLVSSSRWMVKRGELTAFVEENGIFSKRTSRQQVYFFLFNDVLI
VTRKKSEESYTVIDYALRDQIWVGLCQAEDLNLSPVRGTAGMLTSRQNVVSHLFQIRFRS
NHSGDNVTMILGLELLNERARWISALGRNNSDNKNDRNNAMQVEVTRTYTARQPDELSLQ
VADVVLLSQTVDGWYEGERLRDGERGWFLAECAELITCQATIEKNMQRMDRLQSLETNV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggatattggcaacgaagtggatctctccaacagcaatatcactcctctttggaaaaga
cggagcgaaaataacatgaagcccaagcccagacctcacagttaccaaatagatggtgtt
cttatgacagactttcctgcggatgataggtgcatgttcactctcacccagcaggctgag
aagatcagcaccactgcgtcaaacactacagtgctgaaacacactctcaacaaacccaca
aagaagactagggtggttcggagcatcagtattggatatttatctaacggccggttctct
ctgtcaaactttactaaatcggacaatgataagaatgcagaggctacttcttcccctaaa
acaccattgttgcccaccaagaatgggaatggactcagtgtttggcatgatataacagag
ccccttaaacgtctctctagtcagctcaccctcacctctcaaagggatcagattgttttt
ggggatgcgtctccaccgccagacacagtttcaccaaaacctatcacctcaaacatatca
cctcagatctccacacggtcacgccaatcgcaggatgtccctgggtctcccattggcctc
cggagctccccgcttcacagttccacctccagcattccctccatttcctccaaccttagc
cttcccttagaccccctaacgccctgcagcccctcccctgctgaaaggccggggggcatc
ctgttgcagaggcagagttccgggtcatctcagggctcggagggcaagcagcccccttcc
ccgataatactgagcacccacagtcctgcagcgcagaagatgggcacccagcagatcatc
cccaggggtctggtctctgactcacgcttcagcaagccctctcaaaagtttatggacact
ggtaaaggtgccttccgaccgcgaagcatgtttgagacttcttctttctccaccagtaag
gatgatgaactggatagagatgagaatgcaggactactgacaagaggccagcgctccaaa
tcatatcgccgagcaatgttcagtggtgtagatatagacattctatcattagacccaaag
gccaaacgcctgtcccaacctgtgctgaaaggagtcgctgaagagagacagtctaacccg
agtccatacaagagcaaaaatgtggagcggaagaaaggcctcccaacccaacggacgttt
gacagtgaggaggatgaagttctgtaccagaattaccaagagaaagccctgcacaatgat
tctgatgaggacactgagcccaaacaacctcagccagataaaggcattgtggtccaatac
aaacccatccggacatcctggagtcaacttagtgtggttaaaaaaagtggaaagtgtgag
atgttaagccaagaagaacgaaagagacaagaggccatatttgaggtcatctcatcagaa
cacagttacctacacagtctggaaatcctcgttcgcctcttcaagaactcaaatgagctc
agcgagaccattaacaaaacagaccatcaccatctcttctccaacatcgttgatgtctgt
gaggccagcaaaaagtttttcaaggaacttgaagatcggcaccagcagaacatcgtaatt
gatgacataagtgacatcgttacaaggcacgcccagtcaaactttgacccctatgtgaca
tactgctcgaatgaagtgtaccagcagagaaccctgcaaagactcctaaataaaagctct
tcctttaaggaggtactgacacggatcgaggcccacccggactgccggaaccttcccatg
atctccttcctcatccttcccatgcagagagtcacacgactgcccctgttgatggatacc
atatgccagaagacgcccaatgattcggccttttacgaggcatgtaaaaaagctctgcat
gctgtcagcaagcttgtgaggaaatgtaatgagggtgctcgtacaatggagagaacggaa
atgatgtacaccatcaattcccagttggagtttaaaattaagccattcccactggtgtca
tcctcccgctggatggtaaaacgtggtgagctaacggccttcgtagaggaaaatgggatc
ttttccaagaggacatctcgccagcaggtctatttcttcctcttcaatgatgttctcatt
gtcacacgaaagaaaagtgaggagagttatacagttatagactacgcactgagggatcag
atctgggtggggttgtgtcaggctgaagacctgaatctctctccagtacgtggcactgca
ggaatgctgacgtcacgacagaacgtggtcagccacctgttccagatcagattccgcagc
aaccactctggagacaatgtgaccatgatcttagggttggagctacttaatgagagagcc
cgatggatcagcgctctgggacggaacaacagtgacaacaagaatgacagaaacaatgcc
atgcaggtggaggtgacgagaacgtacacagccaggcagccggatgagctctctctacag
gtggctgatgtggtgttgctgtcacagacagtggatggctggtatgaaggagaacgtctg
cgggatggagagaggggctggttcttggccgagtgcgctgaactcatcacctgccaggcg
accatcgagaaaaacatgcaacggatggaccgtctgcaaagcctagagaccaatgtctga
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