Ctenopharyngodon idella (grass carp): 127500479
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Entry
127500479 CDS
T08802
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127500479
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127500479
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
127500479
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
127500479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_2
HEAT_DAAF5
PDS5
MMS19_C
ParcG
IFRD
UTP20
mTOR_dom
TAN
Motif
Other DBs
NCBI-GeneID:
127500479
NCBI-ProteinID:
XP_051727541
LinkDB
All DBs
Position
19:29795341..29851128
Genome browser
AA seq
1561 aa
AA seq
DB search
MEENDNMDYFYQQVLQKDVTRRLQVGPDLIDYLSDPQRSWDVEQDKPRLDKTMDELTGWV
NSSNYKVALLGIDIVSAFVDRLTDRFRGYIGTVMPALVDRLGDAKDQVREQAQGLILKLM
EQTTTPMNVWERLIPGFKHKNFRSREGVCLCLVATLNVYGAQPLSLSKFVPHLCSLTGDQ
NPQVREAAISTLVEVYRHVGERVRVDLNKRDLPSARLQTILNRFDEVLNSGNMALSPSHD
RSFDDDDSVDGSRPSSAQAAFKVPKVPKKPGDSASSSRRPSATAKTGASKEVAGAVDEED
FIKAFTDVPTVQIYSSRDLEDNLNKIREVLSDDKHDWDHRTSALKKIRSLLVAGATDYDC
FYQHLRLLDGSFKLSAKDLRSQVVREACITVAYLSTLLGNKFDHGAEGIVPVLFNLIPNC
AKVMATSGTAAIRIIIRHTHVPRLIPLIASNCTSKSVAVRRRCYEFLDLLLQEWQTHSLE
RHAAVLVESIKKGIRDADSEARVEARKAYCGLRAHFPGEAESLYNSLEPSYQKTLQPHLK
SSGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPASSKSSGSPGSLQRSRSDVDVNA
AAGAKVRHSGQAGGAGRVTAGLTPGSYASLDDASDKDGRLRTKQTLSTASSMGSSQVDSR
GRTRSKMASQSQRSDDSDCTPGSQSATPVGAGSRSGSPGRVLASTALSTLSTGAQRVSAA
PGSHRRSRIPRSQGCSRDSSPTRLSVAPSNISHIYNGSKGARGSRIPRPSVSQGCSREAS
RESSRDTSPVRSFTPLASRHYSRSTGALHAPDAFGAAGSGLGMSQSSRLSSSVSAMRVLN
TGSDVEEALADALLLGDMRGKQKKPARRRYDTYGMYSDDDANSDASSACSERSYSSRNGS
IPTYMRQTEDVAEVLNRCASANWSERKEGLMGLQALLKNQRTLSRVELKRLCEIFTRMFA
DPHSKRDSRGFGTAESGISSASFKVFSMFLETLVDFIAVHKEDLQDWLFVLLTQLLKKMG
ADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQ
MEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKT
FQDGATKLLQNHLRNTGNTAQATMGSPLTRHTPRSPASWSSPLTSPTNTSQNAPSPCAFD
YDTENMNSEEIYSSLRGVSQAIQNFSVRSQEDMTEPPRKRDGDGGEEVRKGCEQTTDSGR
TALDNKTSLLNTMPLLSSSPRPTREYQPVSYSDSSFSSSPFNKSLKDADQDGECLTDDSG
VDQSEVVAELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGD
GEHVIRALALRVLKEILNRQPWRFKNYAELTIMKTLEAHKDPHKEVVRAAEEAASMLATS
ISPDQCIKVLCPIIQSADYPINLAAIKMLTKVIDRLPKEGLVQMLPEIVPGLIQGYDNSE
SSVRKACVFCLVAIYAVIGEDLKPHLSQLSGSKLKLLNLYIKRAQSGSSGDQSSDMGGQG
L
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatgacaacatggactatttttaccagcaggttttgcagaaggacgtgacc
cggcggctgcaggtcggcccggatctcatcgactacctgagcgacccgcagaggtcctgg
gacgtggagcaggacaaaccccgcctggataaaaccatggatgagctgacgggatgggtc
aattccagcaattacaaggttgcattgctggggatcgatattgtcagcgcattcgtggat
cggctgactgatcgcttcagaggttatattggcacagtgatgcctgcgttagttgaccgt
ctgggtgatgcaaaggatcaggttcgagaacaggcacaaggtctcattttgaagctgatg
gagcagacgacaacacccatgaacgtttgggagaggctgattcctggcttcaaacacaaa
aacttccgcagtcgagagggagtctgcttgtgcttggttgccacactaaatgtttacggc
gctcaacccttgagtttgagtaaattcgttccacatctctgttcgctaacaggagaccag
aacccccaggtacgggaggctgctatatcaaccctagtggaggtgtatcggcatgtagga
gagagagtgagagtggacctcaacaaaagagatctaccatctgcacggttacagaccatt
ctgaaccgttttgatgaagtgctgaattcggggaacatggctctcagcccgagtcatgat
cgtagttttgacgacgatgactctgtggatggaagcaggccgtcatcggctcaggctgcg
ttcaaagtacccaaagtacccaagaaacctggagactctgccagcagttccagacgaccc
agtgccactgccaagacaggagcctctaaggaagtggcaggagccgtggatgaggaggat
tttatcaaagcgttcacagacgtccccacggttcagatctactcctcacgggacctggag
gataatctgaacaagatccgtgaggttctatctgacgataaacacgactgggaccataga
acaagtgcgctgaagaaaatccgatctctgctggttgctggggcaacagactacgattgt
ttctaccagcacttgcgcctattggatggctcatttaagctttcggcaaaagacctgcgt
tctcaggtggtgcgggaggcttgcatcacagtggcgtatctttccacactattagggaat
aagtttgatcatggagcagagggaatcgttccagtgctcttcaatctcatccctaactgt
gccaaagtgatggctacatctggaacagcagccatacgcatcatcatacggcacactcat
gtcccacgactgattcctctcatcgctagtaactgcacgtcaaagtctgtggccgtccgg
aggcgctgttatgagttcttggatcttctgctgcaggaatggcagactcactctctggag
aggcatgcggcggtgttggtggagagtattaaaaagggaatcagagatgcagactcagag
gctcgagtcgaggccagaaaggcatactgtgggttgcgggctcatttccccggggaggcg
gagtctctgtataactcattagaaccgtcctatcagaagacacttcagccacatctaaag
agctctggcagcgtggcgtccctcccgcagtcggatcgctcgtcctccagctcgcaagaa
agccttaatcggccgctgtcaaagtggtcagctgctccaggcagagtgcctgcgagttca
aaatcatcaggatctccaggctcattacagcgttcccgcagtgatgtggatgtaaatgca
gccgccggtgctaaagtcagacacagcggacaggctggaggggccggccgagtcacggca
ggcctgacccccggatcatacgcatctctcgatgatgcctctgataaagatgggcgacta
cggactaagcagactttatcaacagcatctagtatgggcagcagtcaggtcgactcgaga
gggcggaccagatcaaagatggcatctcagtcacaacgttccgacgattctgattgcacg
ccaggatcacagtctgctacccctgttggtgcgggttctcgctcgggttccccaggccgg
gttttggccagtacagctctgagcacgctcagtacgggagctcagcgtgtgagtgctgct
ccgggctcccaccgtcgcagcaggatcccacgcagtcaaggctgcagtcgagactccagc
cccacccgtctgtctgttgctccttcaaacatcagccacatctacaatggatcgaaagga
gcgaggggtagtcgtataccacggcctagcgtgagtcagggctgcagtcgtgaggccagt
cgagagagcagcagagacaccagccctgtgcgctccttcacgccactcgcatcccggcat
tattcgcgctcaactggtgctcttcatgccccagatgccttcggggcagcaggttctggg
ttgggtatgtctcagtccagtcgtctctcatcttcagttagtgccatgagagtgctgaac
acaggatcagatgtggaggaagccctggccgatgctctgctattaggagatatgcggggc
aagcagaagaaaccagctcggcggcggtatgacacctatgggatgtactcagacgatgat
gcaaatagcgacgcctccagcgcatgttcagagcgttcgtacagctcccgaaatggcagc
attccgacgtatatgcggcagactgaggacgtggccgaagtgctcaatcgatgtgcctct
gctaactggtctgagagaaaagaggggctgatgggattgcaggctttgctgaaaaaccag
cgaactctcagccgtgttgagctgaagaggttatgtgaaattttcaccaggatgttcgca
gacccacacagcaagcgagactccagaggcttcggcacggcagaatccggtatcagttct
gcctcttttaaggtgttcagcatgtttctggagacacttgtggacttcattgcggttcat
aaggaggatctgcaggactggctctttgtgctgctcacacaactgctgaagaaaatggga
gcagacctgcttggctcagtacaagccaaagtacagaaagccctagacgtcacaagagaa
tctttcccgaatgatttgcagttcactatcctaatgagattcacagttgaccaaactcaa
acaccaaacttaaaggtgaaggtggccattttgaagtacatagaaacactgacactacaa
atggagccgcaggattttgtcaactcaagtgaaaccagactggcagtgtcacgtatcatt
acgtggaccaccgaacccaagagctctgacgtcagaaaggcagcgcagtcggtgttgatc
tcgctgttccagctgaacacaccagagttcacaatgcttcttgctgcactacctaaaacc
tttcaggatggagccaccaaactgcttcagaaccacctacggaacacaggaaacacagcc
caggctacaatgggaagcccactcacccgacacacgccaagatcaccagctagttggtca
agccctttaacatcccctacaaacacatcacaaaacgcaccttcaccatgtgcatttgat
tacgatacagagaacatgaactctgaggagatctacagctccctgagaggagtcagtcag
gccatccagaacttcagtgtccgcagccaagaggacatgacagagccaccgcggaaaaga
gatggagatggtggagaagaggtaagaaagggttgtgagcaaaccacagactctggtcgg
acagcactggataacaagacgtctctgctaaatactatgccgctcctctcctcgagtccc
cgcccaacaagggaataccagccagtcagctactctgactcctccttcagctcctcccct
tttaataaaagcctgaaagatgcagaccaggatggcgagtgcctcactgatgacagtggt
gtggaccagtctgaggtggttgctgagctcctaaaggagctctcgaatcacagcgagcgt
gtggaagagaggaaagctgcgctgtgtgagctaatgcggctgatcagagaaacgcaactg
catgtttgggacgagcacttcaaaaccatcctcctgctgctgctggaaacacttggggat
ggagagcatgtcattcgggcattagcactacgggtgttgaaggaaatcctgaacaggcag
ccgtggcgctttaaaaactacgcagaactcaccattatgaagaccctggaagcacataaa
gacccacacaaagaggtggtgcgggctgcagaagaggcggcgtctatgttggcgacctca
ataagtcccgatcagtgtatcaaggtgctgtgccccatcatccagtcagcagactacccc
atcaacctggctgccatcaagatgctcaccaaagtcatcgaccggctgcccaaagagggt
ctcgttcagatgctccctgagattgtccctgggctcattcagggttatgataactctgag
agcagtgtacgaaaagcgtgtgtattttgccttgtggccatctatgccgtcatcggagag
gatctgaaacctcacctcagccagctgtccggcagcaagctgaaactgttgaatttgtac
ataaagcgagcgcagagcggctccagcggtgaccagtcttcagatatgggagggcagggc
ctgtag
DBGET
integrated database retrieval system
