Ctenopharyngodon idella (grass carp): 127500587
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Entry
127500587 CDS
T08802
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127500587
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
127500587
NCBI-ProteinID:
XP_051727781
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All DBs
Position
19:23938349..24047792
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AA seq
780 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPASTLPSEDRPMVMAPASESQRGGNLAWLASLASGHDRGRL
HISTSAEPDGPQYKPLSATADSTPSSSTHSTRAPPAVTTIPAVYTSPHGTIQYTPLPPNL
HFISSPYSAPYAGYISPLVPHSAATTTTQRDVYASTSISPASKIDQHHHLGRSGLVTTDN
TSSAHSTQYVQIAGSPLSVSPRTAQSPHAHLPLHLHPHHTLPLSGPSQVLVQYGDGLLPK
REETRPREVLNGELEKNRRFGPSPESSAGKQGSTAKGGSSSHQHQIHQQQSPHHYEARHV
VLPAEYAQDSAALRTSLVLVPNSHSSSVADPGGTPDKLPPPTSHTEKGGICAGKPVSRSS
SSASLPFPPPPPPVDNLKGAVTTLSPHAVIQTTHNTTESLSLGLPSTNFYPTQQPIIGYI
AGTGHQQPLSYHTSLPQHLVIPGTQPVIIPVSGTEATATSTTTPLSAPLPHAFVTSTAPK
MENFEPPAPYPHPAAAVVQAQLHLPVVPAPASLLTTPPPPSAPSLPPYFTKGSIIQLADG
ELKRVEDLKTEDFIQSAEISNELKIDSSTVERIDSSHTPNFAIIQFAVGEHRSQVSVEVL
VEYPFFVFGQGWSSCCPERTSQLLELPCTKLSVGDVCISLTLKNLRNGSIKKSQGQVLDA
PTLGPPLKSPKALSSGTRGGVRHTEQENGLGQCVGQGGGGGQGNRENGELRFGERDICKA
PPLTESESSGKPTGRKRRWSAPEGRKVENPEGEPPLTFPKPSFIPQEVKISIEGRSNIGK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaaatcaggagcggagcaatgaatgcctgcccccaaaaaagcgtgaaatccca
gcaagcactctgccctcagaggataggcccatggtgatggcgcctgcaagtgagagccag
cgtggggggaacctggcctggcttgccagtctggcaagcgggcatgacagagggaggctg
cacatcagcacctccgcagaacccgatgggcctcaatacaaaccgttgtcggccacggct
gatagcacaccttcctcatccactcactcaaccagagctccacctgcagtgaccacaata
cctgcagtgtacacgtcaccccacggcaccatccagtacacacccctgcctcccaatcta
catttcatcagctctccatactctgcaccatatgctggctacatctcccccctagttccc
cattcggctgccaccactaccacacaacgtgatgtttatgccagcacctccatttctcca
gcatccaaaattgaccagcaccaccatttgggccgttcaggcctggtcacaactgacaac
acctcttcagcccactccacccaatatgtccaaattgctggttctcctctaagcgtatcc
cctcggactgcacaatcaccccatgctcacttgcctctacacctacaccctcaccacacg
ctccccctcagtggcccctcgcaggtcttagttcagtacggagatggacttttacccaag
agggaggagacaaggcccagggaggtgctgaatggagagctggaaaagaacagacgcttt
ggtccatctcccgagtccagtgcagggaagcagggcagcactgccaaagggggttcctcc
tcccatcagcaccagattcaccagcagcagagcccacatcactatgaggctcggcatgtg
gtgctgcctgctgaatatgcgcaggacagtgcagccttgcggacctcgttggtgctggtt
ccaaacagtcatagctccagtgttgctgatcccggaggtacaccggacaagctgcctccc
ccaacatcccacactgaaaaaggagggatttgtgcaggcaaacctgtgtcccgcagttcc
tcctctgcctcccttccttttcctcctccccctccacctgtggacaatctgaagggagca
gttaccacactgtctccccatgcagttatccagaccacgcataacaccacagagtcactc
tccctgggcctcccctccaccaatttctaccccacccagcagcccatcattggttacatt
gccggcacagggcaccagcaacctctcagctaccacaccagcctaccccagcacctggtc
atccctggaactcagccggtcatcatcccagtaagtggaacggaagctactgctacatcg
accacgacgcccttgtctgcgccactgccccatgctttcgtcacctcaacggcccccaaa
atggagaattttgaacctccggccccatacccccaccctgccgcagctgtggttcaagcc
cagttgcatctgcctgtggttccggcccctgccagcctgctgacgactccaccaccaccc
tcagccccttcactgcccccttacttcacgaagggctccatcatccagttggcagatggg
gaactgaagcgggtggaggacctgaagacggaggatttcattcagagtgctgagatcagc
aatgagctgaagattgactccagcactgtagagcgcatcgacagcagtcatacacctaac
ttcgctattatacagtttgctgtaggagagcatcgctcacaggtcagcgtggaggttcta
gtagagtatcctttctttgtgttcggccagggctggtcatcctgttgtccggaacggact
agccagctgctcgagttgccatgcaccaagctttcagtgggtgacgtctgcatctccctc
actctgaaaaacctgaggaacggctccattaagaagagccaggggcaagtcttggatgcg
cctaccctcggtccaccccttaaatcacccaaagcactctcaagcggcacgcgtggaggt
gttcggcacacagaacaggaaaatggacttgggcagtgtgtaggtcagggaggtggaggc
ggtcaaggcaatagagagaatggagaactgaggtttggcgaaagagacatctgcaaagca
ccaccgctcactgaatctgagtccagcggtaaacccacaggccgtaaaaggaggtggtcg
gcccctgagggccgcaaagtagaaaatcctgaaggagagcctcctttaacgttccccaag
ccttccttcatccctcaggaggttaaaatcagtatcgaaggcagatcaaatattggcaag
tga
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