Ctenopharyngodon idella (grass carp): 127500654
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Entry
127500654 CDS
T08802
Name
(RefSeq) GA-binding protein subunit beta-2a isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127500654
03029 Mitochondrial biogenesis [BR:
cide03029
]
127500654
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
127500654
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
127500654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ank_KRIT1
ANK_LRRK2
LodA_N
Phage_tail_terminator_6
Motif
Other DBs
NCBI-GeneID:
127500654
NCBI-ProteinID:
XP_051727942
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Position
19:13040284..13047663
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AA seq
412 aa
AA seq
DB search
MSLVDLGKRLLEAARNGLDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHEVIVDLLIRSGADINAKDMLKMTALHWAAQHGHHNVA
ELLIKHGADVHALSKFDKSAFDIAVDIQHAELIHLLQEGMQNQVNRNAEASIVNGSSTPQ
FIIQGVPNLQGGVVNLTDLIKANSGDTEEAIAVSALDSSIQQVVNESGQRVITILTDQHG
NLQTNGLGQPFFVTMQDGRQGITNYVLAVPANQITEEVVEDSEPPARKRKIEVSSNNSET
GETEHLQWQLQEANRKAQAYRQQLLRKEQEAEGYRMKLEAMSNGQTNGTTALDQEHIVFV
QEEVGIEETTEGEEEVVMFSEGGVVIKTEEIDSADEQITLVEATAGHTEVIS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggtggatttgggaaagcgtcttttagaagcagctcggaatggtcttgatgac
gaggtcaggacgctgatggccaacggagctccgttcaccactgactggcttggaacttct
ccattacatttagcagcccagcatggtcattattccactgctgaagtcctgctgagggcg
ggtgtcagcagagatgcccgaaccaaagtggacaggaccccactgcacatggctgctaca
gagggccatgaggtcattgtggatttattaatcaggagtggtgccgacatcaatgccaaa
gacatgttgaagatgaccgctcttcactgggcagcccagcacggccatcacaacgtcgca
gagctgttgatcaaacatggtgctgatgtacatgccctcagcaagtttgacaagtcagct
tttgatatcgctgtcgacatacaacatgcagaacttatacacctgttacaggagggaatg
cagaatcaggtgaacaggaatgccgaagcatcaatcgtaaatgggagctccaccccacag
ttcatcattcagggtgtcccaaaccttcaagggggagtcgtcaacctcactgacttgatc
aaagccaactcgggtgacacagaagaggccatagctgtcagtgctttggactcaagtatc
caacaagtggtgaatgaatcgggtcagagggtcataaccatattaacagatcaacatgga
aacctgcagacaaatggactcggccaacctttctttgtcacaatgcaggatggacgacaa
ggtataactaactatgtattggcagttccagccaatcaaatcacagaggaagtggtagag
gactccgaacctcctgctcgtaaaaggaaaattgaagtttcatccaataattcagagact
ggtgaaacagagcatctccagtggcagttacaggaagctaacaggaaagctcaagcctat
cgtcagcaattgctccgcaaagagcaggaagccgagggataccgtatgaaactggaggcc
atgtcaaacggacagaccaacggcaccacggctctggaccaggagcacattgtgtttgtg
caggaagaggtcggtatcgaagaaacaacggagggagaagaggaagttgtcatgttttca
gaaggtggcgtagtcatcaaaacagaagagatcgattctgcggacgagcagatcactcta
gtggaagccacggcgggtcacacagaagtcatctcataa
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