Ctenopharyngodon idella (grass carp): 127500745
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Entry
127500745 CDS
T08802
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127500745
Membrane trafficking [BR:
cide04131
]
Protein recycling
Others
EARP complex
127500745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
127500745
NCBI-ProteinID:
XP_051728158
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All DBs
Position
19:28436543..28572501
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AA seq
1000 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESVVDISPVESFRSPSQEELRELREQPTDPLAEQEIIDSIEEV
YFSSDSFDMVQFELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMRWHDEHYKEEVTTPVLL
IHYHSKVLDDSSAEGSDESSDVDRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKY
DDFIVVLDVISRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETW
ELCPVKSNFSIAQLHEFKFMGQCRSPSVSPSRQPESAELVELSLFEQYLQGGNPFEMQID
NKEEETEDVLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETL
RSRKRSDYNLNRANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYA
VYTFFGRNDMHFQSASLPSQGSQPGVSRQTIPDYWYESSGLGLISSRLRTTLSRIQESLI
DVEAGGENAGPHASPEERKEKVPSPHLSQLVVLTASDTLYGLAERVVATESLVFLAEQFE
FLQPHLDTMMPSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWD
IKEIMSQHNIYVDVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYA
NVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNH
REYSMKQLTNLVTVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgtcccgtcagggtctgaaaagtcctcaggagagtgtg
gttgacataagccctgtggagagcttcaggagccccagccaggaagagctgagggaactg
agggagcagcccaccgatccactggcagaacaggaaatcattgacagcatagaggaagtg
tacttctccagtgactcctttgacatggtgcaattcgagcttgagaaactccctccggat
ctgaaccttctggagcttgaggagtacagagataagctgaagagacaacaagcggctgta
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagctcgag
agagtgacgtctctgcagaccaacctgcagctggctgcagtcatctgcactaatgcacga
aggcagcttcgttctgctaaagaaggcttcaccgaagccagtcttgggctgttggccaat
cagagacgccggcagctgttgacaggattgctgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgccatc
cagctgtgtttagaatgccagaaggctgccagcacattcaaacactacaattgtataagc
gagttgaattccaaacttcaagacactctggagcaaatcgaggaacagctagatgtggcg
ctgtccaaaacctgcaagcactttgatgtttctcactacaccaaagttcaactggcatat
aagcttctaggcaagacacagacggccatggatcagctgcacatgcacttcactcaggca
atccacaacactgtcttccaggtagtgctgggatatgtggagctgtgcgccggcaacgcc
gacaccaagttccagaagatgcagtacaaggacctttgcacgcacattaccacagacagc
tacatcccctgcttgaccgacctctgcaaggccttgtgggaggtgatgcttagttaccat
ctaaccatgcggtggcacgatgagcactacaaagaagaagtgacgactcctgtcctgctc
atacactaccattcaaaagttttggatgattcaagcgcagagggctcagacgaatcctca
gacgtggaccgcagctatgtgaaaaagaagctggaacatggcttaacgcggatctggcag
gacgtccaattgaaagtgaaagcctatttgctgggaacagacatgtccaacttcaagtac
gacgacttcattgtggttctggatgttatcagcaggttgatgcaggtaggagaggaattc
tgcggcagcaagtccgaggtgttgcaggagtccattaagagacaaagtgtgaactacttt
aagaattatcacagaactcgcttggaggagttgcgaatgttccttgaaaatgaaacctgg
gagttgtgccctgtgaagtccaacttcagtattgcccagctccacgagtttaagttcatg
ggtcagtgtcgttctccctcagtatctcccagcagacagccagaatccgcagagctggtg
gagctttctctgtttgagcagtacctgcagggcggaaatccttttgagatgcagatagac
aacaaggaagaggagacagaggatgtcctggcttctaatgggtatgagtcagatgagctg
gaaaagagtgtgtatcaggactacgacagtgacagtgatgtacctgaggagctgaaacaa
gactatgtagatgaacagacaggagacgctccagtgaagagcgtgtccagagagacactt
cgcagccggaagaggtccgactacaatctgaaccgagccaatgcccccatccttaccaac
accaccctcaacgtgattcgcctggtcgggaaatacatgcagatgatgaacattctgaag
cccatcgcctttgatgtcatccactgtgtgtctcagctctttgattactatctgtatgcc
gtctacaccttctttggccgcaatgacatgcacttccaatctgcatctctgccttcacaa
ggctctcaacctggtgtttccagacagacaatccctgattattggtatgaatcatctggg
ctgggtttgatcagcagcagactgaggactacgctcagccgaatccaggagagcctaata
gatgtggaggccggaggggagaacgcaggtcctcatgcgtctcctgaggaaaggaaggag
aaggttcccagtcctcatctcagtcagctggtggtcctgacggctagcgatactctctat
ggtttggctgagagagtcgtcgccactgaatcactagtttttctggcagagcagtttgag
ttccttcagcctcatctcgacaccatgatgccttcagccaagaagcccttcctccagcag
ttctactcacagactgtatctacagccagcgagctccgcaaacccatttactggatcgtg
gcggccaaagccatagattatgaacagatgctgttactgatggcgggagtgaaatgggac
attaaagagataatgtcacagcacaacatctatgtggatgtccttttaaaggagtttgag
aagttcaaccaaagactgggagatgtgtcgaaaatagttcggattcctctgcctgtgtcc
aatgtcttatgggagcactgcatccgtctggccaacaggacattagtggagggctatgct
aatgtgaagaaatgcagtaatgaaggacgtgcactgatgcagctggacttccagcagttc
ctgatgaagctggagaagctcaccgacctcagaccaattccagacaaggagtttgtagag
acctacatcaaagcatactacctaactgagaacgacatggagcagttcatcaagaaccac
agggagtactcaatgaagcagctgactaacctggtcaccgtctgcctcgggtcccacatc
aacaagaaagcacgacagaaactcctcgcagctatcgatgacattgaccggccgaaaaga
taa
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