Ctenopharyngodon idella (grass carp): 127500836
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Entry
127500836 CDS
T08802
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide02010
ABC transporters
cide04145
Phagosome
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127500836
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127500836
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127500836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127500836
Enzymes [BR:
cide01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
127500836
Transporters [BR:
cide02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
127500836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_30
AAA_15
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
127500836
NCBI-ProteinID:
XP_051728339
LinkDB
All DBs
Position
19:20089684..20156365
Genome browser
AA seq
726 aa
AA seq
DB search
MEFKMHHAKALLVDLAISCVLHYSTRTLLKNNSSLFLLTQLWFVAGVKWVSLRCFLLGSW
KDASVRRCVAVTCLMCPVYESGLTLLLNTQPEYWSGSLSCPGKTITSTAATLIACLFWEV
SFPDTKRKAESSECAETKQRNRALFMRVVRYSKPDAPLLSGAFVFLSLAVICDMCIPYYT
GMVIDILGEHYQPNSFMSAIFLMGLLSLGSSLSSGLRGGLFMCTLSRLNKRVRLMLFNSL
VNQEIGFFEDKKTGDLTSRLSVDTKLMSQSVAMNVNILLRSLIKSVGVLYLMVSLSWKLT
LVTFIEAPLIAITQKIYNTHYEQLSKEVQDSVARANETAGEAVAGVRTVRSFRMESSEAC
RYDERLTDTHNLKTRRDTVRAVYLLVRRLMSLGIQVLMLYYGRQLIKSGHMTTGNLVSFI
LYQGDLGTYIRTLVYMYSDMLNSVGAAAKVFEYLDRKPLVDIDGSLHPETLAGQVYFKNL
TFFYPTRPDQPALKNFSLELKPGQMTALVGMSGGGKSTCVSLLERFYQPQQGQILLDGQP
LQNYEHKYLHRKVAMVGQDPVLFSGSIRDNICYGLADYDQKKVEDAAKEANAHDFISRLE
KSYDSDVGERGCLLSGGQKQRIAIARALIRQPQVLILDEVTSSLDTESERMVQDALARRP
NQTLLVIAHRLKTIERADQIMVIDKGEVVEQGTHQELMEKKGNYYKLRERLFNEEKEADK
EEVKQE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaaatgcatcatgctaaagcgctgctcgtggacctggcgataagctgtgtg
ctacattacagcacacgtacattattaaagaataacagcagtttatttctcttgactcag
ctctggttcgtggctggtgtgaagtgggtaagtctcaggtgttttctgctcggcagctgg
aaagatgcgtccgtgcggcgctgtgtggcggtgacatgcttgatgtgtccggtttatgaa
agcggactgacgctgctcttgaacactcagccggagtactggagcgggtctttgtcttgc
cctggaaaaactattacttctacagctgcaacacttatagcgtgtttgttctgggaagta
agttttcccgacacaaaaaggaaagcggaaagttcagaatgcgcggagacgaaacagaga
aaccgggcgctctttatgcgagtggtccgttattccaagcccgacgcccccttactgagt
ggagcttttgtgtttctttcacttgctgtcatatgtgacatgtgcattccatattacacg
ggaatggtcatagacatcctgggagaacattaccaaccaaacagcttcatgtcagcaatc
tttctcatgggtctcctctcactgggcagctctttgtcctctgggttgcgtggaggtctc
ttcatgtgcactctgtccagactgaacaagagagttcgtcttatgctctttaattctttg
gtcaatcaggagataggattttttgaggataaaaagacaggggacttgacatcacgtctg
tctgtcgacaccaagctaatgagccaatcagtggcaatgaacgtgaacatcctcctgcgc
agcttaatcaaaagtgttggcgtcctgtatctgatggtcagcctgtcctggaaactcacg
ctggtcactttcatcgaagctcctctgattgccatcactcaaaagatttacaacacacac
tatgagcaattatcaaaagaagttcaggactcggtagccagagccaatgagacagcagga
gaagcggttgccggggtgaggactgtacgcagtttccgcatggaatctagtgaagcctgt
cgttatgacgaacgtttgactgacactcacaacctgaagactcgaagagatacagtgagg
gccgtctacctattagtgcgacggctaatgtcattaggaattcaagttctgatgttgtac
tacggtcgccaactcatcaaatcaggacacatgactacaggcaaccttgtgtccttcatc
ctctaccagggtgacctgggaacatacattaggacgcttgtctacatgtattcagacatg
ctaaactctgtgggtgcagctgctaaagtttttgagtacctggacagaaagccactagtg
gacatagatggaagtcttcaccctgaaaccctggctggccaagtctacttcaaaaacctc
actttcttctacccaactcgacctgatcagccagccctcaagaacttctctctggagttg
aagccgggtcagatgacggctctggtgggaatgtcaggtggggggaagagcacctgtgtg
agtctgctggagagattctaccagcctcagcagggacagattctgttagatggacaacca
cttcagaactacgagcacaaatatttacaccgaaaggtggccatggtaggtcaggaccct
gtgcttttttctggctccatcagggacaacatatgttacggtttggctgactatgatcag
aaaaaggtggaggatgcagccaaagaagccaatgcccatgacttcatcagtagactagaa
aaatcatatgactcagatgttggagagcgtggctgtcttctctctgggggtcagaagcag
cgcattgctatcgccagagctctgatcagacaacctcaggtgctcatactggatgaggtc
accagcagcctggacactgagagcgaacgcatggttcaggatgctctggctcgccgccct
aaccagaccttgctggtgatcgctcataggctgaaaacaattgaaagggcagaccagatc
atggtgattgacaaaggggaggttgtggagcaagggacgcatcaggaactgatggagaag
aaaggcaattactataaactgagagagaggctcttcaatgaggaaaaagaagccgataag
gaagaggtcaaacaagaatga
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