Ctenopharyngodon idella (grass carp): 127500855
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Entry
127500855 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127500855
04121 Ubiquitin system [BR:
cide04121
]
127500855
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127500855
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127500855
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127500855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
Zn_ribbon_19
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
C1_2
Rad50_zn_hook
HypA
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
127500855
NCBI-ProteinID:
XP_051728361
LinkDB
All DBs
Position
19:complement(11953499..11969525)
Genome browser
AA seq
304 aa
AA seq
DB search
MAEAAAAPQPRFFCHCCKGEIDPKLPEYVCPRCESGFIEEVSENSSLLLQSRDGAGSDDV
ASQFAELWQLLFMEHSALLSDPTVTDALRSRSGVEAAVGDPASGTAGPVASVETLLDCTE
PALHPQQNSQQRNSRLDQGQAVEGIVQQFLDGLFSSSDSAGSQTSSWSSMLHSNPGDYAW
GQGGLDVVITQLLGQSENTGPPPAEKEMISSLPTVSISSEQAACRLECTVCREEYSVGES
VRQLPCLHYFHSNCIVPWLQLHDTCPVCRKSLDGEDRGFQPHTGPPGPIPSPTNVEERST
FETI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgctgctgctccacaaccccggttcttctgtcattgctgtaaaggtgaa
atcgaccccaagctgccggaatatgtttgtcccagatgtgaatctggcttcattgaagag
gtgtcagaaaactccagtcttcttcttcagagtcgtgatggggctggcagtgatgacgtg
gcctcacagtttgcagagctgtggcagctgctcttcatggaacattctgccctcctatcc
gaccccaccgtcacagacgcgctccgcagccgctctggggtcgaggcagcagttggtgat
cctgcctctgggacagcaggacctgtagcttccgtggagactttgttagactgcacagag
cctgctctccaccctcaacaaaacagccagcagcgaaactctagactggatcagggacag
gctgtggaggggattgtccagcagttcctggatggtctgttttccagttctgacagtgca
ggttcccaaacctcctcatggtctagcatgctacactctaaccctggagattatgcttgg
ggacaaggaggtttagatgtggtcatcacacagttgcttggtcagtctgaaaataccggc
ccccctcctgccgagaaggagatgatctcatctctccccactgttagcatctcctcagaa
caggctgcatgccgactggaatgcactgtgtgtagagaggaatactctgtaggggaatct
gtccgacagctgccctgtctgcactactttcacagcaactgtattgtgccctggctacaa
ctgcatgacacctgccctgtctgccggaaaagtctggatggtgaagaccggggtttccag
ccacatacaggacctcctgggccaatcccctcaccgacgaatgtagaggaacgtagcacc
tttgagactatttag
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