Ctenopharyngodon idella (grass carp): 127500874
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Entry
127500874 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127500874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127500874
03016 Transfer RNA biogenesis [BR:
cide03016
]
127500874
03012 Translation factors [BR:
cide03012
]
127500874
04131 Membrane trafficking [BR:
cide04131
]
127500874
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127500874
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127500874
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127500874
Translation factors [BR:
cide03012
]
Eukaryotic type
Elongation factors
127500874
Membrane trafficking [BR:
cide04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
127500874
Exosome [BR:
cide04147
]
Exosomal proteins
Proteins found in most exosomes
127500874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
127500874
NCBI-ProteinID:
XP_051728414
LinkDB
All DBs
Position
19:30296242..30301921
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEPSTNMTWFKGWKIERKEGAASGVTLLEALDSILPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPANVTTEVKSVEMHHESLA
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMQAANFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVDKKAATAGKVTKSAQKAAKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcatattaacatcgtggttatcggccatgtcgattctggcaag
tccaccaccaccggccatctgatctacaaatgtggaggcatcgataagagaaccatcgag
aagtttgagaaagaagccgctgagatgggcaagggctccttcaaatatgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgatatttctctctggaaattt
gagaccagcaagtactacgtcaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacttctcaggctgactgtgctgtgctgattgtcgctgccggtgtt
ggtgagtttgaggctggtatctccaagaacggacagacccgtgagcatgccctgcttgcc
tacactctgggagtcaaacagcttattgttggagtcaacaaaatggactccaccgagccc
ccctacagccagaagcgctatgaggaaatcaccaaggaggtcagcgcctacatcaagaag
atcggctacaaccctgccaccgttgccttcgttccaatctctggatggcatggagacaac
atgctggagcccagcacaaacatgacctggttcaagggatggaagattgagaggaaggaa
ggggctgccagtggtgttacccttctcgaagccctggactccatcctgccacccactcgg
cccaccgacaagcctcttcgtttgcctctgcaggatgtgtataagattggaggtattgga
actgtgcctgtcggacgtgttgagaccggaactctgaaggctggtatggttgtgaccttc
gcccctgccaacgtgaccactgaggtcaagtccgttgaaatgcaccacgagtctcttgct
gaggctctccccggtgacaacgttggcttcaacgttaagaacgtgtccgtcaaggacatc
cgtcgtggtaacgtggctggagacagcaagaacgacccacccatgcaggctgccaacttc
accgctcaggtcatcatcctgaaccaccctggtcagatctctcaaggctacgccccagtg
ctggactgccacaccgctcacattgcctgcaagttttctgaactcaaggagaaaattgac
cgtcgttctggcaagaagctcgaggacaaccccaaggctcttaaatctggagatgctgcc
attattgttatgatccctggcaagcccatgtgtgtggagagcttctctcagtacccacca
ctgggtcgttttgctgtgcgtgacatgaggcagaccgtcgctgttggtgtcatcaaggct
gttgacaagaaagccgccactgccggcaaggtgaccaagtctgctcagaaggcagccaaa
gttaaatga
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