Ctenopharyngodon idella (grass carp): 127500945
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Entry
127500945 CDS
T08802
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127500945
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127500945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127500945
Proteoglycans [BR:
cide00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
127500945
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Paralog
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GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
127500945
NCBI-ProteinID:
XP_051728542
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Position
19:30001927..30043758
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AA seq
396 aa
AA seq
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MKLPCWMALALLLLAQTALAYRPSDDEGSGDEFSDDEDYFSGSGSGFPDINVRPTAAGVA
VTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVLDRDSKQELEEEEMR
TTKEPDRERESGMEIRLDADKEREQETSKATVAPRLTDVPVVFMDSSTAPGETTVTTGDL
EEEEDDLYITTETMMFEPSSTPETTTEDITTTEVIPTTVSSTTAKPSRPRPALTTPSTAP
VRPRQPQTTPSRAAPPESSTRSLMSSTTQTQTPDETVNNEVAGPGPSGDFEIHEKEVQGN
EAGRGRKAGDPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVML
LVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggatggcgctcgcgctgctgctgctggcgcagactgcactggca
tatcgaccaagcgacgatgagggatccggagatgaattttccgatgatgaggactacttt
tccggatctggctctggctttccagatataaacgttcgtccgactgcagcaggtgtggcg
gtcactacagaggagcccctcccactttctaccacacaggccactggccccgccccctcg
gcctcccccgccgcagagccgagtagcccacctccacctgaggtggagcgcgagagcggc
ttgggacaagatgtactagacagagacagcaaacaggagcttgaggaggaggaaatgagg
acgacgaaggagccggatagagaacgagaatccgggatggaaataaggttggatgctgac
aaagagcgggaacaagagacgtcgaaggctacggttgcaccccggctgactgacgttcct
gtagtgttcatggattcatccaccgctccgggtgagactacagtgaccactggtgacctg
gaggaagaggaggacgatctgtacattactacagaaacgatgatgtttgagccgtccagc
acaccagagacgacgacagaggacatcacaaccactgaggttattcccaccaccgtttcg
tccaccactgctaagccgtctagaccacgtcctgccctgaccactccaagcaccgccccc
gtacgaccccggcaaccacagaccaccccgagtagagccgccccgcctgagagcagcact
cgctcgctgatgagctccacaacacagacacaaacaccagatgaaactgtaaataatgaa
gttgcaggaccaggtccaagtggtgattttgaaatccacgagaaggaagttcaaggcaac
gaggccggccgaggcagaaaggctggagatccagatttgactggaaacacagtagatgct
gcgggaagctccgccgctcaacttccacagaagaacatcctcgagaggaaggaagttttg
atagcggtgatagtcggaggtgtagtcggagcactcttcgctgcgttcctcgtaatgtta
ctcgtctaccggatgaaaaagaaagatgaaggcagctatacattggaggaacctaaacaa
gctactgtcacctaccagaaaccggacaagcaggaagaattctacgcctaa
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