KEGG   Ctenopharyngodon idella (grass carp): 127500945
Entry
127500945         CDS       T08802                                 
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04514  Cell adhesion molecules
cide04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127500945
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127500945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cide00535]
    127500945
Proteoglycans [BR:cide00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   127500945
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 127500945
NCBI-ProteinID: XP_051728542
LinkDB
Position
19:30001927..30043758
AA seq 396 aa
MKLPCWMALALLLLAQTALAYRPSDDEGSGDEFSDDEDYFSGSGSGFPDINVRPTAAGVA
VTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVLDRDSKQELEEEEMR
TTKEPDRERESGMEIRLDADKEREQETSKATVAPRLTDVPVVFMDSSTAPGETTVTTGDL
EEEEDDLYITTETMMFEPSSTPETTTEDITTTEVIPTTVSSTTAKPSRPRPALTTPSTAP
VRPRQPQTTPSRAAPPESSTRSLMSSTTQTQTPDETVNNEVAGPGPSGDFEIHEKEVQGN
EAGRGRKAGDPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVML
LVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgaagctcccgtgctggatggcgctcgcgctgctgctgctggcgcagactgcactggca
tatcgaccaagcgacgatgagggatccggagatgaattttccgatgatgaggactacttt
tccggatctggctctggctttccagatataaacgttcgtccgactgcagcaggtgtggcg
gtcactacagaggagcccctcccactttctaccacacaggccactggccccgccccctcg
gcctcccccgccgcagagccgagtagcccacctccacctgaggtggagcgcgagagcggc
ttgggacaagatgtactagacagagacagcaaacaggagcttgaggaggaggaaatgagg
acgacgaaggagccggatagagaacgagaatccgggatggaaataaggttggatgctgac
aaagagcgggaacaagagacgtcgaaggctacggttgcaccccggctgactgacgttcct
gtagtgttcatggattcatccaccgctccgggtgagactacagtgaccactggtgacctg
gaggaagaggaggacgatctgtacattactacagaaacgatgatgtttgagccgtccagc
acaccagagacgacgacagaggacatcacaaccactgaggttattcccaccaccgtttcg
tccaccactgctaagccgtctagaccacgtcctgccctgaccactccaagcaccgccccc
gtacgaccccggcaaccacagaccaccccgagtagagccgccccgcctgagagcagcact
cgctcgctgatgagctccacaacacagacacaaacaccagatgaaactgtaaataatgaa
gttgcaggaccaggtccaagtggtgattttgaaatccacgagaaggaagttcaaggcaac
gaggccggccgaggcagaaaggctggagatccagatttgactggaaacacagtagatgct
gcgggaagctccgccgctcaacttccacagaagaacatcctcgagaggaaggaagttttg
atagcggtgatagtcggaggtgtagtcggagcactcttcgctgcgttcctcgtaatgtta
ctcgtctaccggatgaaaaagaaagatgaaggcagctatacattggaggaacctaaacaa
gctactgtcacctaccagaaaccggacaagcaggaagaattctacgcctaa

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