KEGG   Ctenopharyngodon idella (grass carp): 127500968
Entry
127500968         CDS       T08802                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127500968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cide03041]
    127500968
   03032 DNA replication proteins [BR:cide03032]
    127500968
Spliceosome [BR:cide03041]
 Complex A
  U1 snRNP components
   Sm proteins
    127500968
  U2 snRNP components
    127500968
 Complex B
  U1 snRNP components
    127500968
  U4/U6.U5 tri-snRNP components
    127500968
 Complex C
  U2 snRNP components
    127500968
DNA replication proteins [BR:cide03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     127500968
SSDB
Motif
Pfam: LSM EBNA2_Core Gemin7 YomU_Tube Hfq SM-ATX API5 AAA_RNF213_3
Other DBs
NCBI-GeneID: 127500968
NCBI-ProteinID: XP_051728589
LinkDB
Position
19
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaaactcgtcaggtttttgatgaaactgagccatgaaacagtcaccattgagctgaag
aatggcacacaggtccatggcaccattacaggtgtggatgtcagtatgaacactcacctc
aaagctgtgaagatgaccctcaaaaacagagaacccactcagctggagtctctcagtatc
cgtggcaacaacatccgctatttcatcctgcccgacagtcttcctctggacacgctgctg
gtcgacatcgagcctaaagtcaagtcaaagaagagagaggctgttgctggccgcggtcga
ggaagaggacggggtcgtggcagaggaagaggacgtggccgcggcgggccgaggagatga

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