Ctenopharyngodon idella (grass carp): 127501091
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Entry
127501091 CDS
T08802
Symbol
si:dkey-208k4.2
Name
(RefSeq) P43 5S RNA-binding protein-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127501091 (si:dkey-208k4.2)
03021 Transcription machinery [BR:
cide03021
]
127501091 (si:dkey-208k4.2)
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127501091 (si:dkey-208k4.2)
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
127501091 (si:dkey-208k4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
Zap1_zf1
TFIIIA_zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
B129_C2H2-zf
zf-C2H2_8
DUF7410
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
127501091
NCBI-ProteinID:
XP_051728842
LinkDB
All DBs
Position
19:7093106..7096430
Genome browser
AA seq
366 aa
AA seq
DB search
MMTRQVLRKEDAVPRLQLFNCSYAECSATFTRQWRLQEHETVHTGARPHKCVFAECGRSF
TRKSHLSRHASVHSGVKNFKCTADACGKNFYAADKLKRHVRYAHSEKRDYFKCKEPHCAK
TFRKRRALKLHLATHGTSSFRCLKSGCGMRFESHIARKAHDRRHIGYRCLYAECPISVHT
WRNLRKHVASHPASFSCMVCKKAFRKRDALRRHKRTHALQKPVLLCPSQGCQAYFSTTFN
LQHHIRKVHLQLLSHGCSFPDCSKTFAMRESLVRHMLRHEPDVAKLKHPHKRSSKSWQKR
LEGRNRRPLVENLHSLFSLRMNITQRAKLEADLTGLFNERKIPHHVDPEVNLQDLFSVRP
TPKVVG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccagacaggtgcttagaaaagaggatgctgtgccgcgactgcagttgtttaac
tgctcttatgctgaatgtagcgcgacattcactcggcaatggcgtctgcaggagcacgag
actgtgcacactggtgcgcgacctcacaagtgtgtatttgcggaatgtggacgcagtttt
acccgtaaatcgcacctgagtcggcatgcttcagtacacagcggcgtgaaaaacttcaag
tgcactgctgatgcatgtggcaaaaacttctatgctgcagacaaacttaagaggcacgtg
cgttacgcgcacagtgaaaaacgcgattacttcaagtgtaaagagcctcattgcgcaaag
acgttcaggaaacggcgagcgttaaaactgcacctggcgacgcacggtacttcaagtttc
agatgcttgaaaagcggctgtggaatgaggtttgagtctcatattgcacggaaagctcat
gatagaagacacataggttatcgctgtctttatgctgaatgccccatcagtgtgcacact
tggaggaatttacggaaacacgtggcgagtcacccagcatcgttctcctgtatggtatgt
aaaaaggcatttcggaaacgtgatgccttgaggaggcacaagcggacacatgcgttgcag
aagccagttttgctatgtcccagtcaaggttgccaggcgtacttttccacaaccttcaac
ctgcagcaccatattcgaaaggtccatctgcagcttctctcacacggctgttccttccct
gactgcagcaagacttttgccatgcgcgaaagccttgtccgccacatgttgcgtcatgaa
cctgatgtggccaaactcaagcacccacataagcggagcagcaagagttggcagaagcgg
ttggaagggcgaaatcgacgtcctctggttgaaaaccttcactcgcttttttcattgcgc
atgaacatcactcagagggccaaactagaagctgatctgacgggcctgtttaatgagcgt
aaaatcccacaccacgttgatcctgaagtaaacctgcaagatctgttcagtgtccggcca
actccaaaggtggttggttga
DBGET
integrated database retrieval system
