Ctenopharyngodon idella (grass carp): 127501142
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Entry
127501142 CDS
T08802
Name
(RefSeq) F-box/LRR-repeat protein 6-like isoform X1
KO
K10272
F-box and leucine-rich repeat protein 6
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127501142
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127501142
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GFIT
Motif
Pfam:
F-box-like
LRR_At5g56370
LRR_6
LRR_4
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
127501142
NCBI-ProteinID:
XP_051728907
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Position
19:10060093..10069121
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AA seq
568 aa
AA seq
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MQVSNSSTEPESLQAPSAEMSTSRAGTSQNAPAKGKGLLKRKAGSLKDDKSKKKKRKNVK
RTVRPNYTIQEGEDMLLIISNISSGDSIWKPKRKGCKKKKLNKKGKSKTSANKTKKAPVK
AKIPKVTEETTDKNVDLDNVNAVRFDHWGQSLPIEVLVKIFQFAVHQDGAVPFLCRVGRV
CRLWNGAASSPVLWRSVSVGYCWIEPGKSQLPGTEQKIRNTIDWLAENRLSQLREFSLCH
WKKHVDYVIQKVSQSCPNLHSLKLSYCTGMTETAFQILGADCRSLENINVQHSEFNVDGL
VSFLEGYGNQIKKIYFTHSTKSDKLLSALSKSCCPELRLLEINTKLDGGYCQLPICIQAL
QIGCPKLQTFRLMNVTPVPKMIRNTPSSTSGFPMLEELCIATSSHSFMTDSDLNNVLHGS
PHLRVLDLRGASRITATGLYALPFEKLECLYWGLYFNSNTMVASKKGIHMLAQKWSSTLR
ELDLANQPFSEEDMEIAMGHLAHGAGVDLFRSLNLSGTKITSSALRLFITQAPALKYLNL
SSCRYLPRGLKRVYHGQEDIQLLLDKLG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttccaactcaagcacagaaccagagtcactccaggcaccttctgcagaaatg
tcaaccagcagagctggaacatcccagaatgcacctgcaaaaggaaaaggacttttgaaa
aggaaagctggttctcttaaggatgacaaaagcaaaaagaaaaagagaaaaaatgtcaaa
cgaactgtgagaccaaattacaccatccaggagggagaggacatgcttttgattatttca
aatataagtagtggtgacagtatatggaagcccaagcggaagggatgtaagaaaaaaaag
ttaaacaaaaaagggaaaagtaaaacctctgctaacaaaactaaaaaagcaccagtaaaa
gctaaaatccctaaagtcacagaagaaactactgataaaaatgttgatttggacaatgtg
aatgctgttaggtttgaccactggggtcagagtttaccaatagaggtcctggtgaaaatc
tttcagtttgcagttcaccaggatggagcagttccttttctgtgcagggttggcagagtt
tgccgtctatggaatggagctgcatcctctccggtcctgtggcgtagtgtgtcagttggc
tactgctggattgaacccggtaagagtcagttacctgggacagaacagaagattaggaac
actatagactggctagctgaaaacagattgtcacagctgagggagttctccctttgccac
tggaaaaaacatgttgactatgttatccagaaagtttcacaatcatgcccaaatcttcat
tctctcaagctgtcttactgcacaggaatgacagaaacagccttccaaatccttggcgct
gactgtcgttcattagagaatataaatgtgcaacactcagagtttaatgttgatggtctg
gtgtccttccttgaggggtacggcaaccaaataaagaaaatttacttcacgcacagcacc
aagagtgacaaactgctcagtgctttgtctaaaagttgctgtcctgagctcaggctgctg
gagatcaatactaaattagatggaggatactgccagcttcccatctgcattcaggctttg
cagattggatgccctaaacttcagacttttagattgatgaatgtcactccagttcctaaa
atgatccgcaacacacccagttcaacatccggttttcctatgctagaggagctgtgcatt
gccacttcctctcactccttcatgacagacagtgacctgaacaatgtgctgcatggctcc
ccccacctgcgtgtgctagacctgcgtggtgcctcccgcatcacagccactggcctctac
gctctgccttttgagaaactggagtgtctatattggggcctgtacttcaatagcaatacc
atggtagcatccaagaaaggaatacacatgcttgcccagaaatggagcagcaccctcagg
gagcttgatttggccaaccagccattttcagaggaagacatggagattgccatgggacat
cttgcacatggtgctggagttgatttgtttcgctccctgaacctcagtggtacaaaaatc
acttcatctgcactcaggttattcataacccaggcaccagctctgaagtatttgaatctg
tcttcttgccggtatctgcccagagggctcaaacgagtatatcatggtcaagaagacatt
cagcttctcctggacaaattaggctga
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