Ctenopharyngodon idella (grass carp): 127501173
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Entry
127501173 CDS
T08802
Name
(RefSeq) tapasin-like isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127501173
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
C1-set
Motif
Other DBs
NCBI-GeneID:
127501173
NCBI-ProteinID:
XP_051728981
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All DBs
Position
19:13316009..13386806
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AA seq
452 aa
AA seq
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MSEISTIYKISIIAFTLFCSASGSGCPVLECWFVQEKPGHGGGFSVPMSQEKSLMFIRTE
AYSEETMSELHPPADISPSRIYYVTDPAGTFCSAALNPPKGSVNKPKCEINPFMPHASMV
RWTSALTDSAQSPVYLQADWFSVAAQGLDEQLTLSNIMRAPSASKEPKVILSVSSKSPVV
RSRLGEPVLLDCGFWVDPSSPVHGSGFSVEWRYQFRGEGRLVLAYDGKNDRFAETSETGA
DIDITGLYETGNASLILEESRVRHSGTYICTVYLPHLLAQVAVDLEIVEPPSLSIYPSPL
PLLVPGQVLLIQCEASGFAPHTLDLGWEFTGADGKSRSLGQGGVTGHRQASDGTFSQSSR
LELDSSKLGLGRGGDITCVAKHDGGTRRATATLNVIGVSAPSIEDSMAMVAVALLLYSMI
KFLSWTFSPSGESVQSDHYITEELFTIELALE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatttcgaccatatacaagatatctatcatcgcatttacattgttttgtagc
gcttccggttctggatgtccggttctggagtgctggtttgtccaggagaagcccggtcat
ggaggaggtttctcagtaccaatgagtcaagagaaatctctaatgttcatcagaactgaa
gcctacagtgaagagaccatgtctgaacttcatcctcctgcagacatcagcccgtccagg
atttactatgtgactgatccagctggaacgttctgtagtgccgctctgaacccacccaaa
ggctctgtgaacaaaccaaagtgtgagattaaccctttcatgcctcacgcctccatggtc
agatggacatctgctctcactgactccgcccaaagtccagtctacctgcaagctgattgg
ttctcagtggcagcacaagggcttgacgagcagctgacattgtccaatattatgagagcg
ccttcagcttctaaagagccaaaagtcattctcagtgtgtccagtaaatctcctgtggtg
cgctctagactgggagaaccggttctgttagactgtgggttctgggtcgacccgtcttct
ccagttcacggctctggattctctgtcgagtggcgttatcagtttcggggtgagggacgg
ctggtcctcgcttacgatggcaagaacgatcggtttgcagagacgtcagagactggagca
gatattgacattacaggcctctatgaaacaggaaatgcatccctgattctggaagaatct
cgagtgagacactcaggaacttacatctgcacagtgtatcttccacacctgctggctcag
gtagccgtggacctggagatagttgagcctccatctctctccatctacccttctcctctt
cctctgctggttcctgggcaggtgctgctgatccagtgtgaggcgtctggttttgctcct
cacactctggatctgggctgggagttcaccggggctgatgggaagtcccgctctctgggt
cagggtggtgtaacgggtcacagacaggcgtctgatggcaccttcagtcagagcagccgt
ctggagctggactcgagtaaactggggctcggccgtggtggtgacatcacctgtgtagcc
aaacatgacggaggaacacggcgagccactgctacactcaatgtgattggtgtcagcgct
ccttctattgaggactctatggcgatggtcgctgtagctctgctgctttacagcatgata
aagtttctttcctggacattcagcccttctggtgagtcagttcagtctgatcactacatc
actgaagagctctttacaattgagctggcattagaatga
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