Ctenopharyngodon idella (grass carp): 127501178
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Entry
127501178 CDS
T08802
Name
(RefSeq) tapasin-like isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127501178
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
C1-set
Terminase_7
Motif
Other DBs
NCBI-GeneID:
127501178
NCBI-ProteinID:
XP_051729019
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All DBs
Position
19:13384919..13432239
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AA seq
444 aa
AA seq
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MMSDISTIYKISIIAFILCFRASGSGCPVLECWFVQEKPGHGGGFSVPMSQEKSLMFIRT
EAYSEETMSELHPSADISPSRIYYVTDPAGTFCSAALNPPKGSVNKPKCEINPFMPHASM
VRWTSALTDSAQSPVYLQADWFSVAAQGLDEQLTLSNIMRAPSASKEPKVILSVSSKTPV
VRSRLGEPVLLDCGFWVDPSSPVHGSGFSVEWRYQFRGEGRLVLAYDGKNDRFAETSETG
ADIDITGLYETGNASLILEESRVRHSGTYICTVYLPHLLAQVAVDLEIVEPPSLSIYPSP
LPLLVPGQVLLIQCEASGFAPHTLDLGWEFTGADGKSCSLGQGGVTGHRQASDGTFSQSS
RLELDSSKLGLGRGGDITCVAKHDGGTRRATAALNVIGVSAPSIEDSMAMVAVALVLYGM
IKFLSWTFSSSDSSDTELKNKKEK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatatttcgaccatatacaagatatctatcatcgcttttatattgtgtttt
cgtgcttctggttctggatgtccggttctggagtgctggtttgtccaggagaagcccggt
catggaggaggtttctcagtaccaatgagtcaagagaaatctctaatgttcatcagaact
gaagcctacagtgaagagaccatgtctgaacttcatccttctgcagacatcagcccgtcc
aggatttactatgtgactgatccagctggcacgttctgtagtgccgctctgaacccaccc
aaaggctctgtgaacaaaccaaagtgtgagattaaccctttcatgcctcacgcctccatg
gtcagatggacatctgctctcactgactccgcccaaagtccagtctacctgcaagctgat
tggttctcagtggcagcacaagggcttgacgagcagctgacattgtccaatattatgaga
gcgccttcagcttctaaagagccaaaagtaattctcagtgtctccagtaaaactcctgtg
gtccgctctagactgggagaaccggttctgttggactgtgggttctgggtcgacccgtct
tctccagttcacggctctggattctctgtcgagtggcgttatcagtttcggggtgaggga
cggctggtcctcgcttacgatggcaagaacgatcggtttgcagagacatcagagaccgga
gctgatattgacatcacaggcctctatgaaacaggaaatgcatccctgattctggaagaa
tctcgagtgagacactcaggaacttacatctgcacagtgtatcttccacacctgctggct
caggtagccgtggacctggagatagttgagcctccatctctctccatctacccttctcct
cttcctctgctggttcctgggcaggtgctgctgatccagtgtgaggcgtctggttttgct
cctcacactctggatctgggctgggagttcaccggggctgatgggaagtcctgctctctg
ggtcagggtggtgtaacgggtcacagacaggcgtctgatggcaccttcagtcagagcagc
cgtctggagctggactcgagtaaactggggctcggccgtggtggtgacatcacctgtgta
gccaaacatgacggaggaacacgacgagccactgctgcactcaatgtgattggtgtcagc
gctccttctattgaggactctatggcgatggtcgctgttgctctggtgctttacggcatg
ataaagtttctttcctggacattcagctcttctgactccagtgacactgaattaaagaat
aagaaggagaagtaa
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