Ctenopharyngodon idella (grass carp): 127501202
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Entry
127501202 CDS
T08802
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127501202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127501202
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
SR proteins
127501202
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
127501202
NCBI-ProteinID:
XP_051729055
LinkDB
All DBs
Position
19:2159455..2166060
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AA seq
368 aa
AA seq
DB search
MLSYCTGKMSRVYVGKLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAV
YDLNGKDLCGKRVIVEHTIGQRRDGGNRSGRSNRYGRGGGDRYGPPTRTDYRLIVENLSS
RCSWQDLKDYMRQAGEVTYADTNKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI
EDRPGARRRRSYSRSASRSRSRSRRSRRSRSHSRTSSRSRPSGSRSRSRSTSKKTKGRSS
RMEESSNGARRGGESARDNSLSCSPQNKKSKRENKRGRSYSRSRSRSKSGNNRDLSRESG
SKSQEATKSSDEGRVAERVHRSRAHSRSRSQTPPDADRRRESRSRSKSRSHSRSKSYSRS
RSHSRSRS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctactgcaccgggaaaatgtctcgagtttacgttggaaagttgagctatcgc
gccagagagaaagatgtagaaaggttttttaaaggttatgggaagatactggaagtggac
ctgaaaaatggatatggctttgtagagtttgatgacccccgtgatgcagatgatgctgtg
tacgatttgaacggcaaagatctttgtgggaagagagtgatagtggagcataccatagga
cagcgccgtgatggaggaaaccgatctggaagaagtaatcgttatgggcgtggaggaggg
gacaggtacggcccacctacacgcacggattacaggctgattgtggaaaatctgtctagt
cgctgcagctggcaggacctgaaggactacatgcgtcaggctggtgaggtaacttatgca
gacactaataagggccgcaagaatgagggggtcatagagttcaggcagtactcagacatg
aaaagagccctggagaaacttgacggcactgaggtcaatggaaggaaaattcgtctcatt
gaggaccgacctggtgccagacgcagacgctcctattctcgcagcgcctccaggtctcgc
tccaggagcaggaggtctcgcaggagccgaagccacagtcgaaccagtagccgctcaaga
ccctcaggctcacgatcacgcagcaggtcaaccagcaagaagacgaagggcaggagcagt
aggatggaggagagcagtaatggagctcgcagaggaggtgaaagcgcaagggataatagc
ttgagctgcagcccccaaaacaaaaagagtaaacgggagaacaagaggggtcgctcctat
tctcgatccagatctcggtccaaatcgggcaacaacagggatctctccagggagtctggg
tccaaatctcaggaggcaaccaagagcagtgatgaaggcagagtggctgaacgggtgcac
cgttctagagctcattctcgatccagatcacaaacgccaccagatgctgatcggcgcagg
gaatctagatccagatccaaatctcgctcacattcacgctcaaaatcgtattcccgatct
cgatcccactcaaggtctcgttcctaa
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integrated database retrieval system
