Ctenopharyngodon idella (grass carp): 127501233
Help
Entry
127501233 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127501233
Membrane trafficking [BR:
cide04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
127501233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
127501233
NCBI-ProteinID:
XP_051729103
LinkDB
All DBs
Position
19:complement(19489502..19513075)
Genome browser
AA seq
1344 aa
AA seq
DB search
MSGEESGVPQDLLESVQDAVGKQVKLCLVQKVNLEVKGDKLESRILALAPHRVFLLSTRV
PAKVDQSFSVFDIQSINSVKQKQLLVDYDRGQLSLRLPSDQDTDDFIALIGTNIQEICPG
LDPLRVIKKLVLKPVERITSLQTLWENHSPAEAGPCGGFSRLYWCVCDQMGVPYRDEVQW
DVDTIYLSQDTRELCLQDFIHLDNRDLLAITAALEFNQWFIKLSIKDFKLTADLCDQIFR
VVSRSTRLEELTLDNTGLKSDFAQRFAAALSQNPNSALNTISLTNNCIEDKGVMFLSAAL
SKLTPGLKQLDLSKNSLSAKGVNVLAQCFCSTSLTHLNLSGNTLRGEDMPHLWSFLSQPN
HLHTLDLSNSEASLDLVCSSLLRGSLKHLTVLNMSRSVFSYKRGKELPSSFKQFFSSASS
LKNICLSGTKLPAEGLKALLLGLACNSNLRDIALDISGCELRSAGAQILEGCIAEIPNIT
SLDVSDNGLDSDLSTLLVWLGKNRSIKHLSIGRNFSNIKTKNLGQVLVSVVHMIQEEDSP
LASLSLADSRLKADLSVVLNALGGNSSLTHLDISGNNMGDFGAKMLAKALQINTKLRTLI
WDRNCVSAQGLQDMAAALEKNYTIRFMPVPITDAAQALKNSPEKTEDALLKMEQYLLRNH
ESRRYLQDQAFRLQQGFSTSTTQQMMSQVCVQVQDQLNSLCFSKSDRVQQDMKAAESLMR
DAKSSTTLLRSLYDQRSGGRAACVSDGSAGVCVQQVQEKLCSVAGELSVLIDQQLQGLLV
SMLDTAQSVCPHVMQQARLREDLLHASEGRTSVSKAFITSTLLEQSAIDIINKISEVKLS
MASCLSEYITDEILQSLSHSQHTLAGHLSRKGQQPLLHHESQETEVLDETEMQTNNLMPA
EPEPEPQRTHRAKRKSIHSRMFRPMSAAFELDFDLCKALEDVSFCVDDLPLPPPLTPSPS
QPMSPPPVEAELPQPEPVSFSDLPTRDTPTLQHITKYRPRRTKKAKPSRAACQPISTDAA
QEVDQSSSLDEGVPEFYSKKVTNIAAKVSAADAEKSRDSRLSGFFSLIKHRASTKATPTS
PTPIPTATTTTVSVTATETDAPPPEPAVNPEPVAPEVKGHVQEGVKRGSPLTGHHMGVQV
LGNDLLAEIRAKQEKRKKAGVSPSAASKADAPDEGGDHGHATPAVQKEAQDEPAARKLKH
TPAHTHIPAHTHTLEHTHTPEHTHTAEHTHTAEHTPSSERHSSRPSVSFSSPDCISESPP
RVMLSVTEEAEPGPVTHSTEGGASPDPPPESPADVSVFDTHTAPTLTVSRSISCGHPRTD
PEEGDTERQRTNSLPTAAPANHSS
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaagagtcaggcgttcctcaggatctgctggagagcgttcaggatgccgtc
gggaagcaggtcaagctgtgtttggttcagaaggtcaacctggaggtcaaaggtgacaaa
ctggagagcagaatcctggctctcgctcctcatcgagtgtttctgctgagcacacgagtg
cctgctaaagtcgatcaatccttcagtgtttttgacattcagagcatcaacagtgttaaa
cagaagcagctgctggtggactatgacagagggcagctgtctctgagactcccgtctgat
caggacactgatgattttattgcactaataggaacaaacattcaggagatttgtccagga
ctcgacccgctgagggtaataaagaagcttgtgttaaagccggtggagagaatcaccagt
ttacagacactctgggaaaatcacagtccagctgaagcaggaccctgcggcggtttctcg
cgtctctactggtgtgtgtgcgatcagatgggcgttccctacagggacgaggtgcagtgg
gacgtggacaccatctatctgtctcaggacacgcgggagctctgcctgcaggactttata
cacctggacaacagggatctgctggccatcactgctgcgctggagttcaaccagtggttc
atcaaactctccataaaggactttaaactgactgcagatctgtgtgatcagatattcaga
gttgtgtctcgatctaccagactagaggaactgactctggacaacaccggactcaagagt
gatttcgctcagaggtttgctgctgcgttgagtcagaatccaaactcagcattaaacacg
atcagtctgaccaacaactgtattgaagataaaggtgtcatgtttctgagcgctgcactg
tccaaactcacacctggactgaaacagctggacctgtccaagaactcactgtcagctaaa
ggtgtgaatgttctggctcagtgtttctgctccacgtcactcacacacctgaatctgtct
ggaaacacactcagaggagaggacatgcctcacctgtggagtttcctgtctcagcccaac
catctgcacacactcgacctgtcgaacagcgaagcttccctcgacctggtgtgttcttca
ctgctgcgcggctctctcaaacacctgaccgttctcaacatgtccagaagtgtcttcagt
tacaagagagggaaagagctgccatcctccttcaagcagttcttcagcagtgcttcgtcc
ctcaagaacatctgcctgtctggaaccaaactacctgctgaaggactcaaagctctgctg
cttggtctggcctgtaactcaaacctgagagacatcgctctggacatcagcggctgtgag
ttgcggtcagcaggcgctcagattctggagggctgcatcgctgagatcccaaacattacc
agcctggatgtgtctgacaacgggctggactcggatctgtccacgctcctcgtgtggctc
gggaagaaccgctccatcaaacacttgtccatcggcaggaacttcagcaacatcaaaacc
aagaatctcgggcaggttctggtctctgtggtccacatgattcaggaagaggattctccg
ctggcgtctctgtctctggccgactcgcgtctgaaggccgatctgtcagtggttctgaac
gctctgggcgggaacagcagtctgacccatctggacatcagcgggaacaacatgggcgac
tttggggcgaagatgctggccaaagctctgcagatcaacaccaaactcaggacgttgatc
tgggaccgtaactgtgtcagcgctcaggggctacaggacatggctgctgctctggagaag
aattacaccatcaggttcatgccggttcccatcacagacgcggctcaagctctgaagaac
agcccggagaaaactgaagacgcccttctcaagatggagcagtatctgctgcgtaaccat
gagagcaggcgatatctgcaggatcaggccttccggctgcagcagggcttcagcaccagc
acaacacaacagatgatgtcgcaggtgtgtgtgcaggtccaggatcagttgaactctctt
tgcttcagtaagagtgacagagttcagcaggacatgaaggcggccgagagcctgatgaga
gacgccaagagctccacaacactgctgcgcagtctgtatgaccagcgctcaggcgggcga
gcggcgtgcgtcagtgacgggtcagcgggcgtgtgtgtgcagcaggtgcaggagaaactg
tgttcagtggcaggagagctcagtgtgctcatagaccagcagctgcagggtttgctggtg
tcgatgttggatacggcgcagagtgtgtgtcctcacgtcatgcagcaggcgcgtttgcgt
gaggatcttctacacgccagcgaggggaggacgagtgtgtcgaaagccttcatcacctcc
accctgctggagcagtcggccatcgacatcatcaataagatcagtgaggtgaagctcagt
atggcgtcgtgtctctctgaatacatcactgatgagatcttacagtctctctctcactct
caacacacactggcaggtcatctgagcaggaaaggtcagcagccgctgctccatcatgaa
tcacaggagacagaagttctagacgagacagaaatgcagacaaacaacctgatgccagca
gaaccagaaccagagccacagcggacacatagagccaagaggaagagcattcacagcagg
atgttcagacccatgtccgccgcattcgagctggactttgatctgtgtaaggcgttagag
gacgtgtccttctgtgtggacgatctgcctctgccgccgcccctgaccccgtccccttca
cagccaatgtccccgccccctgtggaggcggagctaccgcagcctgagcctgtgagcttc
agcgacctgcccaccagggacacgcccactctacagcacatcaccaaatacaggccgcgg
cggaccaagaaggccaaacccagcagagccgcctgtcagccaatcagcacagacgctgcg
caggaagtggatcagagcagctctctggatgaaggcgtgccggagttctactccaaaaaa
gtcaccaacatcgcagccaaagtgtctgctgcggacgcagagaagagcagagattctcgt
ctgagcggcttcttcagcctcatcaagcatcgcgcctcgacgaaagccacgcccaccagc
cccacccccatccccacggcaaccacgacaacggtctccgtgacagcgacagaaacggac
gccccgcccccagagccggctgtgaacccagagcctgttgcgcctgaggtcaaaggtcac
gtgcaggagggcgtcaaacgcggcagtccgctgacggggcatcacatgggtgtgcaggtg
ctgggcaacgacctgctggctgagatacgagccaaacaagagaaacgcaagaaggcaggc
gtgtctccatctgctgcatccaaggctgacgctcctgatgaaggtggagatcatggacac
gcgacaccagcggtccagaaggaggctcaagatgaacctgcagccagaaaactcaaacac
acacctgcacacacacacatacctgcacacacacacacacttgaacacacacacacacct
gaacacacacacacagctgaacacacacacacagctgaacacacaccgtcatcagagcgc
cactccagccgtccgtcagtgtcgttcagctcccccgactgcatcagtgagtcccccccg
cgggtgatgctgtcagtcactgaggaggcggagccgggtcctgtcactcacagcacagag
ggaggagcctcacctgacccccctccggagtctccggctgacgtcagtgtgttcgacaca
cacaccgcacccacactgaccgtcagtcgctccatatcctgcggtcaccccaggaccgac
ccagaggagggcgacactgagcgccagcgcaccaattccctccccacagccgctccggcc
aatcacagctcttga
DBGET
integrated database retrieval system
