Ctenopharyngodon idella (grass carp): 127501336
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Entry
127501336 CDS
T08802
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127501336
Peptidases and inhibitors [BR:
cide01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
127501336
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
DUF1194
Ku_N
Motif
Other DBs
NCBI-GeneID:
127501336
NCBI-ProteinID:
XP_051729240
LinkDB
All DBs
Position
19:20293263..20333183
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AA seq
1108 aa
AA seq
DB search
MTTPAALFCPVELAFLVDSSEKATMFMFEKQKEFVLRFSTRLMQMQVPSWRMRVRLAVLQ
YSSTVSVEHNFRDWQDIDVFQSQVSAMTYIGQGTYSAYAITNATQLFTRETAPNSLRAEL
LLTDGVDHPRSPSAVNAAADAKNNNIRMFVIGLSEFTRDELDNSRLRSIASAPPQQHLFS
LSDPQLDDKLFRELSELANTACPQRKSCLCEKGERGFPGNPGKPGDPGFDGPPGPKGPKG
EAGLNGRPGLEGIRGRPGPRGVKGGKGECGTPGLKGDQGPDGPPGPRGPRGDQGLSGNPG
DPGPEGRVGPKGERGPSGPTGPPGYPGTGIPGPKGEKGGQGRPGPTGPVGIGEPGMPGAS
GPPGVQGIQGFPGEGLPGPKGDRGFEGPKGVRGLPGLGIKGDKGNTGEPGLPGSMGFPGV
GTQGEKGDLGPMGPPGPRGPPGVGMVGPKGDQGFPGESGLQGERGIGEPGPKGEPGPDGA
PGIPGIPGEDGSVGSKGEMGLPGERGPEGSPGKGIPGEKGDRGDRGPRGLPGSAGAPGPP
GAKGEPGSLGMMGLPGPPGRGLPGSKGEPGPAGTSGPVGEPGVGTAGPKGDRGSPGPVGP
QGMKGEGYPGPQGLPGLPGLPGEVGPEGQGIPGPKGDRGSPGATGPSGPPGIGLLGPKGA
VGQPGAPGLPGPPGEGIQGPKGDPGFQGNPGPRGPPGDGLPGEKGDRGLVGERGRKGERG
EHGVPGQTGVKGKPGEKGDPGLSREEVIRIIQEICGCGLKCQTSPLELVFVIDSSESVGP
ENFEVVKDFVNALIDRLSVSHEATRVGVVMYSHVDVVVASLQQLFDQTGIKTAVRNMQYL
GEGTFTGSAIRRATQLFQAARPGVRKVAVVLTDGQADKRDAVRLKDAAEDAHDAGIEIFV
IGIMNSSNSQYAEFRNEMNILASEPDEEHVYLTDFMRLHTMENKLLSQICERNDGTLFSP
NGKTFPPFGPDPVPDRTEAPTSDYFVTEDKETALPTEFETTSSTQQPDDQMTHQSSISVV
GPQTLINWWYVPKINSPPRTLPPPPPRGDSKDVDCRQGLDPGPCREYRVMWYYDLEANAC
AQFWYGGCQGNSNRFETEDICRNTCVQT
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccagcagctctgttctgtccagtggagttggcttttttggtggacagttca
gagaaagctacaatgtttatgtttgagaagcagaaggaattcgtgttgcgcttcagcacc
agactgatgcagatgcaagtgcccagctggcgtatgcgggtgagacttgccgtcctgcag
tacagcagcaccgtctcagtggagcacaacttccgggactggcaggacatagatgtgttc
caaagtcaagtgagtgctatgacctacatcggccaaggcacctactcagcttatgccatc
acaaacgccactcagctcttcaccagagagacagcgcccaacagcttaagagcagagctt
ctgttgacggatggtgttgaccacccgcgcagccccagtgctgtgaatgcagctgcagat
gctaagaacaacaacatccgtatgtttgtcattgggctgtcagaattcacacgagatgag
ctggacaacagtagactgaggtccatcgccagcgcaccacctcagcagcacctcttcagc
ctcagtgacccacagctggatgacaaactcttcagggaactgagtgaacttgcgaacaca
gcttgtccacagcgcaaatcctgtctgtgtgagaaaggagagagaggttttcccggaaat
ccaggtaaaccaggtgatccaggatttgatgggcctcctggtcccaaaggacctaaagga
gaggcaggtttaaatggacgtccaggattagagggtataaggggaagaccaggaccaaga
ggagtaaagggtgggaaaggagaatgtggcaccccagggttaaaaggagatcaaggccca
gatggacctccaggaccacgtggaccaagaggagatcagggactgagcggtaaccctggt
gaccctggccctgagggccgtgtcggacctaaaggtgagcgaggacctagcggacccacc
ggacctccagggtacccagggactgggattcctggtccaaagggggagaaaggtggccaa
ggcagacctgggcccactgggcctgttggtataggggagccaggaatgcctggcgcttca
ggacctccaggagttcaaggcatccaagggtttccaggagagggtttaccagggccaaag
ggtgacagaggatttgagggtcctaaaggtgtacgtggacttcctgggttgggcattaag
ggtgataagggtaacacaggggaacctggtttacctggatcgatgggatttccaggagta
gggacccagggtgaaaagggagacctgggacccatgggtccacctggaccaagaggcccc
cctggagtgggcatggtgggccctaagggggatcaaggctttccaggagaatctggccta
caaggtgagagaggaattggagaaccaggaccaaaaggagaaccaggaccagacggagca
cctggtattcctggcatcccaggtgaagatggctctgtgggttcaaagggtgagatgggt
ttacctggtgaacgaggtccagagggctcacctgggaaaggaattcccggtgaaaagggg
gaccgaggtgacagaggacctcggggtctcccaggaagtgctggagcaccgggaccccca
ggggccaagggagaaccaggaagtttaggtatgatggggttacctggacctccgggtcga
ggattgcctggttcaaagggtgagccaggacctgcaggaacctctggtcctgttggagag
ccaggtgttgggactgcaggccctaagggtgacagaggaagtccaggaccagtggggcca
caaggaatgaagggggagggttaccccggaccacaggggcttccagggttgcctggacta
ccgggtgaagttggacctgaaggacaaggaattccaggaccaaagggagacaggggctca
cccggagctactggcccttcagggcctccaggaattggactgcttggaccaaagggtgca
gttggccagcctggtgctccaggtcttccaggccctccaggagagggaattcagggtccc
aagggagaccctgggtttcaagggaaccctggcccaagagggcctccgggtgatggcctg
ccaggagagaagggcgacagaggcctagtgggggagcgcggaagaaaaggagagagagga
gaacatggagtgcctggacaaacaggagtcaagggaaaaccaggagagaagggagatcct
ggcctatctagagaagaggtgatcagaataatccaggaaatatgtggatgtggtctgaaa
tgccagacgagtcctctggaactggtctttgtcattgacagctctgagagtgtgggtcca
gagaactttgaagtggtgaaggactttgtgaatgctctgatcgatcgcttgtccgtgagc
catgaagccacgcgtgttggggtggtgatgtacagtcatgtggatgtggtggtcgccagc
ctacaacagctgtttgaccagacgggcatcaaaactgcagtgcgcaatatgcagtacctg
ggcgagggcaccttcacgggcagtgccatccgccgggccactcagctcttccaagcagct
cggcctggtgtaagaaaggttgcggtcgtgttgacggatggtcaggccgacaaacgtgac
gcagtgaggctgaaagatgctgcagaagatgctcacgatgctgggattgaaatctttgtg
attggtatcatgaacagcagtaactcccagtatgcagagtttaggaatgagatgaacatt
ttggcatctgaacctgatgaagaacatgtctacttaactgacttcatgagactgcacaca
atggagaataaactgctaagtcagatctgcgagcgtaatgatggaacactcttcagccca
aatggcaaaacattccctccatttgggcctgatccagttccagatagaactgaggctccc
accagtgattatttcgtcacagaggacaaagagactgcacttccaacagagtttgagacc
acttcttctacccagcaaccagatgaccagatgacacaccagtcctccatctcagtagta
ggaccccagacgctcataaactggtggtatgttccaaaaatcaactcacctccccgaact
ctacctcctccaccccctcgtggtgactcgaaagatgtagactgtagacagggattggac
cctgggccttgtagagagtacagggtcatgtggtactatgacctggaggccaacgcatgc
gcacaattctggtatggtggttgccaaggcaacagcaaccgctttgagacggaagacatt
tgtagaaacacttgtgtgcagacataa
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integrated database retrieval system
