Ctenopharyngodon idella (grass carp): 127501408
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Entry
127501408 CDS
T08802
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127501408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127501408
Membrane trafficking [BR:
cide04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127501408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
127501408
NCBI-ProteinID:
XP_051729334
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All DBs
Position
19:complement(29641792..29651573)
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AA seq
568 aa
AA seq
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MNVTLAVKQYISKMIESSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVEHLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLQGVSRGRSWEPSVLPRVTQGLTSVLLSLKKCPMIRYQLS
SDMSKRLAESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
DQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELACQ
NDHSNAQQSLRRLLQNPRLSEIDAVRLVMLYALRYEKHSSSILPSLMEELNRKGVSERHR
KMVQAVVEYGGKRVRGSDLIAPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPNSLRDRPQDIIVFIIGGATYEEALTVYNLNRTMPGVRIVLGGTAIHNT
KSFLEEVMLSVGSGGDRTQGRGRQMSRR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgactctggctgtcaagcagtatatttccaaaatgatagagagcagcggaccc
gggatgaaggtgctgctgatggacaaggagacgaccagtattgtgagtgtggtctacact
cagtctgagatcctgcagaaggaggtctacctttttgagcgcattgactcacaaaaccga
gacaatatgaagcaccttaaagccatctgctttctccggccaaccaaggagaacgtagag
cacctgattcaagagcttcgtcggcccaagtatagtgtctatttcatctatttcagtaat
gtgatcagtaagagtgagataaaggctttggctgaggcagatgaacaggaagtagttgca
gaagtgcaggagttctatggagatttcattgctgtgaaccctcatcttttctccctcaac
cttcaaggagtgtccaggggtcgcagttgggagcccagtgtactgcctcgtgtcactcag
ggtttgacatcagtgctgctgtccctgaagaaatgccccatgatccgctaccagctctct
tctgacatgtccaaaaggctggcagagagtgtcaaacaaatcattactaaggagtatgaa
ctgtttgacttcagaaaaacagaagtacctcctcttctcctgattttagacagaagcgat
gatgccattactccccttctcaaccagtggacgtatcaggctatggttcatgagctactg
ggcctcaataacaaccgcatagacctgtcgagagtgcctggaatcagtaaggacctacgg
gaggtggtcttgtctgcagaaaatgatgagttttatgcaaataacttgtacctgaatttt
ggtgagattggaacaaacatcaagaacctgatggaggattttcagaagaaaaagcccaag
gaccaacagaagttagagtccatatctgacatgaaggcatttgtggataactacccccag
tttaagaaaatgtctggcacggtctcaaaacacgtgaccgtggttggggagctgtcccgc
ctggtcagtgaaagacagctgatggaggtgtcagaggtggagcaggagttggcctgccag
aatgaccactccaacgcacaacagagcttgaggcggctactgcagaaccctcggctttct
gaaatcgacgctgtgcggctggtgatgctgtatgctcttcgctacgagaaacacagcagc
agtattctgcccagccttatggaagagctcaatcgcaaaggggtgtcagagagacaccgc
aagatggtgcaggccgtggtggaatatggcggaaaacgagtcagaggaagtgacctcatc
gctcctacagatgctgtggccattaccaagcagtttttcaaaggactcaagggagttgaa
aatgtgtacacacagcatcagccacttctacatgacacgctggatcagctgatcaagggt
cgtttgaaggacagccagttcccctacctcgggccaaattctctgagagacagacctcaa
gacattattgtcttcataattggcggggccacttacgaggaggcattaactgtttacaac
ctgaaccgcacaatgccgggggtacgcatcgtactcgggggcacggccattcacaacact
aagagcttcctggaggaagtgatgctctctgtgggttcaggtggagacaggacacaagga
agaggccgtcagatgagtcgacgttga
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