Ctenopharyngodon idella (grass carp): 127501508
Help
Entry
127501508 CDS
T08802
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04020
Calcium signaling pathway
cide04080
Neuroactive ligand-receptor interaction
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127501508
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127501508
04082 Neuroactive ligand signaling
127501508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127501508
Ion channels [BR:
cide04040
]
Ligand-gated channels
Glutamate (ionotropic)
127501508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
BTK
Motif
Other DBs
NCBI-GeneID:
127501508
NCBI-ProteinID:
XP_051729465
LinkDB
All DBs
Position
19:11362225..11445070
Genome browser
AA seq
1919 aa
AA seq
DB search
MAARPALSFLLAVLACTGPAQPSPPLLLRPRERERDSGGASGGVNIAVVHSGSSHLPETS
AGVGGVGGASSAGSGSGAGPSSSSSNSGTGFLSRAWSGQVGESVMTPWGPANVIWLAVNE
SSPGSLLLQLCELLATTPLQGLVFEEEKPPPPNRAPLAPMLEFVSAQTGVPVIAVGGGAG
LGREPQESGSVYLQFLCSTGLQLEVIFEVLEEFDWTAFSVVTTRHHGYEDFLAMVEGMID
GSFIGWERKSVVMLNLTDDPGGARTRRLLKENEAQVRLLYCSQEEAEHIFKAAWASGQAT
PSHMWFAVGPALSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRREYAG
ARGTSFAGNCMMDGNQTQRVPDRIRFFSNITLSGRDYSFNNDGYLANPLLDVISYTAGRG
WEEVGWWENGVLRLRYPPWSRYGPFLKPLDDSQHLRVVTLEERPFVIVEPADPGTGSCIR
DSVPCRLPLNSSMVVEGIQSMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDG
EWNGMVGEVVSKRADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLE
PYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWAL
VFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQ
HPTEQYPPLRFGTVPNGSTEENIRSNYPSMHQYMVRNNQRGVEEAIDNLKTGKLDAFIYD
AAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDML
ERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCLGR
SGGLDFLLAFSRGMYSCCNFEDETAPGGSQSTLPQYHHVSTVPPPPPPHVISTAVANPPI
TKAQQQQQQQQKQHHQQPPVYNALLPGSPPSGGHSGMALGPSNSPILGAPMPCSTFLPRH
DRRLAVVDRWTRPKVGPEKPGGVSSGITDLTQFQGMPSHWGAGITGGEGGLDEYKRYYGP
IDPEGLGVSAEPQNIGTQTPKSKHRGTKSSGNPRLPPKGQASGHLPINPALPHLSPPHQS
VWRRSSFSKRKGSGGPLYENILPLGRRGGGRYGMRDGGGRRGRRPPPLPLPIPVPLSSPT
QTPPSPSPTICYTSTSTSSSSTTSSSSSSESVSRSNSPSSSSSYTSSQSFRYRTDVQDVY
EDYDTDELTEESSLLLGRRKSRSRMSSRSLPSSPPPPPIPPRKPCAQRAQVRDRAGSQLA
QLQEWWASWGEKEKGRRAAGDREVKEEKRHHKERERERKRRKKGRKKKKREERERERERK
RRKVKKKKKKEEKSRRREREKRPEQEEVDLDRKDVFEKGIGQEYYSYPALRRSSFRKKSE
SSTRSYEWDVIRDGVKRDRDDQGGDNEEPSRGKERHHRSPKSLRHSRPRSNNKHFSTSNK
PSSTVKFWGSGNPTSESQSSFVPLLPIASKRRKSVGAERDEHGRGVESRPLLGNHCRGKP
CSREGLSFQEWESEEEDEESEVERSRPEEQGRRRESRGMNSESERDREKTVEIYTDDEGS
SGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPARERGNSINSRDDSFLGLGGGESSLGF
GAGAGWGSGGLGSNQWPPTPLTPPPPRRYWSVDKLPVKTEKKSKSRSQEKSRGHTSCSCQ
SPHHSASTHSKWNRVTSRSQEELLPHCHSFSSSVRPKRQSSKPDRAQSQAKSGSQSNLNA
QRPQRSDRSRQPPSPPQSLPPSLPSPMVPALPAPPSSSHHIHVPPPTSSSSVSSPSVVSS
TPGAPQPSSLSSSSAKLQYQKLRSVPQPQRYQSPHLPLKTKSLCSRRGSAQFSSVESEV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggcccgccctttcgtttctattggctgtgctggcgtgcactgggccggcc
cagccctcccccccactgctgctccgcccccgggagagagagagggactcaggaggggct
tcgggcggagtcaacatcgctgtggttcactctggctcctcccacctcccggaaacgagc
gctggggtggggggtgtgggcggtgcctcttcagcgggctccggctccggtgccgggcca
agcagcagcagcagcaactcggggacgggttttctaagtcgagcctggtcaggacaggtg
ggtgaaagtgtgatgacgccgtggggtcctgcgaacgtgatctggctggccgtgaacgag
agcagtcctgggagcctcttgctacagttatgcgagttactggctaccactccgctacaa
ggccttgtgtttgaggaagagaagccaccaccgcccaaccgggcaccgttagcacctatg
ctggaatttgtctcggcccagacaggagtgcctgtcattgctgtgggaggaggggctggt
ctggggagggagccacaggagagcggctccgtctacttgcagttcttgtgctccactggc
ctgcagctggaggtcatttttgaagtcctggaggagtttgattggacagcgttctctgtg
gttaccacacgccaccatggctatgaggatttcctggccatggtggaaggcatgatagat
ggctccttcatcggttgggagagaaagagtgtggtgatgctcaacctgaccgatgacccg
ggaggggctcgtacccgcaggctactgaaggagaatgaagcacaggtacgactcctgtat
tgctcacaggaagaggcggagcacatttttaaggctgcatgggcatcagggcaggctact
ccctcacatatgtggtttgcggtgggcccggctctgtcaggacttggtcttgagggtcta
cccaaggctctgttcgctgtgaggccacagggatggagggacgagccacgacggcgaatt
gcaaagggtgtgtcggtactgacgcacggtgctatggctttgcgtagggagtatgccggg
gctcgagggacgagcttcgccgggaactgcatgatggatggaaatcaaacccagagggtg
ccagataggatcaggttcttcagtaacataactctatctggacgggactattcctttaat
aatgacggttatctggcaaatccgctcctggatgttatctcctacactgcaggaagaggc
tgggaggaggtaggttggtgggagaatggagtgctgcgtctgcgttacccgccctggtcc
cggtacggcccttttctcaaacctctggatgattcccagcacttgcgagtggttactttg
gaggagaggccattcgtcatcgtagagcctgctgatcctggaacaggctcctgcatcaga
gactctgttccgtgccgtctgccactcaacagcagcatggttgttgagggcattcaatcc
atgaagcactgctgcaaaggcttctgtattgatgttctcaagcgcctggctaaaatagtg
ggcttcacctatgacctctatctggtgaccaatggcaggcatggaaagaacatagatgga
gagtggaatggaatggttggggaggtggtgtccaagcgggccgacatggcgatcggctcc
ctgactattaatgaggagaggtcagaggtggtggagttctctgttccgtttgtggagact
ggcatcagtgtcatggtctctcgtagcaacggcactgtgtcaccatctgctttcctcgag
ccgtacagcccagctgtgtgggtgatgatgttcgtcatgtgcctgtctgtggtggctgtg
accgtttttatattcgagttcttcagccctgttggatataaccgaagcttacagagcggg
aagaaggcaggaggttcaaagttcaccatagggaagtctatttggctgctatgggctctg
gtttttaataactcagttccggtggaaaacccgagaggcactaccagtaagataatggtg
ctggtctgggctttctttgctgtcatcttcctagccagctacactgctaacctggctgct
ttcatgatccaagaagaatacatcgacactgtgtcaggcctcagtgataagaagtttcaa
catcccacagagcagtatcctcccttacgattcggcactgtcccaaacgggagtacggag
gagaatatacggagcaattaccccagcatgcatcagtacatggtgcggaacaatcagaga
ggagtggaagaggccatcgacaaccttaaaaccggcaaactggatgcattcatatatgat
gcggctgtcctgaactacatggctcgtaaagacgagggctgcaaagtaatgaccattggc
tctgggaaagtgtttgctacaacaggatatggcattgccttacacaagaactcccgctgg
aagcggcctttagaccttgccctgctgcagctagttggagatgatgagattgacatgctt
gaacgactctggttgtctgggatctgccataatgataaaattgaggtgatgagttccaaa
ctggacatagacaacatggcaggagtcttctatatgcttctggttgccatgggcctaagt
ctgctggtgtttgcgtgggagcatcttgtctattggaagcttcgccactgtttgggccgc
tcaggaggacttgacttcctgctggctttcagtcggggaatgtacagctgctgcaatttt
gaggatgaaacagctcctggaggttcccaaagcactcttccacaatatcatcatgtttcc
acagttccccctcctccgccacctcatgtgatctctacagccgtggccaatccccctatc
actaaggcacaacaacagcagcaacaacaacaaaagcaacaccaccagcagccaccggta
tacaatgctcttcttcctggctcccctccatcaggtggacattctggaatggctctaggg
ccatcgaacagtcccattcttggagcacccatgccttgctctactttcctaccacgccat
gatcgcagattagctgtggtggatcggtggacacgtccaaaggtgggtcctgagaagccc
ggtggtgtgagcagtgggattacagacttaacacaattccaaggcatgccctctcactgg
ggtgcaggaataactggaggggaggggggtctggatgagtacaagagatactatgggcca
attgatccagagggcttaggggtctctgcagagcctcaaaacataggcactcaaactcca
aaatctaagcatcgaggaacaaaatcctctggaaatccacggttacctcctaaaggtcaa
gcttctggacacttaccaattaaccctgctttgccacatctctctccaccccatcaatct
gtctggaggagaagcagcttctcaaaaaggaagggctcaggggggccactgtacgaaaac
atccttccactaggaagaagaggtgggggcagatatggaatgagggacggtggtggaaga
agaggacgtcgtcctcctccccttcctctgcctatacctgtgcccctttcttccccaaca
caaactccaccctcaccttctccaactatatgctacacatccacttccaccagcagctcc
agtaccaccagttcatcctcttcttcagaatcagtctcccgatccaattctccctcctct
tcatcatcatatacatcatcacaaagcttcagataccggacagatgtgcaagacgtgtat
gaggactatgacaccgatgagcttacagaggaatcaagcttgcttttggggaggagaaaa
agtcgttcacgtatgtcttctcgatccctgcccagcagtcctccaccaccacctatacca
ccccgcaaaccttgcgcacagagggcgcaggtgagagacagagcaggcagtcagcttgca
cagcttcaagagtggtgggcgtcttggggagagaaagaaaaaggtagaagagcagctgga
gatagagaagttaaggaggaaaaacggcatcacaaagaaagggaaagagagagaaagagg
aggaagaagggtagaaagaaaaagaagagagaagagcgtgaaagagaaagggagcgtaaa
agacgtaaggtgaaaaagaaaaagaaaaaagaggagaaatccagaagaagggagagggaa
aagcgacctgaacaagaggaagtagatttggacaggaaagatgtgttcgaaaaaggaata
ggacaggaatattattcctatcctgcactgagacggagctctttcagaaaaaaaagtgaa
agctctaccagaagttatgagtgggatgttatcagagatggagtgaagagagatagggat
gatcaaggaggagataatgaagaacccagtaggggaaaggaaaggcatcacagaagccca
aaatcccttcgccactctaggccaaggtccaacaacaagcatttttccacctcaaacaaa
ccttcttcaaccgtcaaattttggggtagtgggaacccaacttcagagtctcaatcgtct
tttgtacccctacttcctatcgcctctaaaagacgaaagtctgtaggagctgaaagagat
gagcatggaagaggtgtagagagtcggcccttattgggaaatcactgtagaggtaagcct
tgctcgagagaaggcttgtcgtttcaggaatgggaatccgaggaagaagatgaggagtct
gaagtggaaagaagtaggccagaagaacaggggagacggcgagaaagcagaggaatgaac
tctgagtctgaaagggacagagaaaaaactgttgagatatacacagatgatgaaggttcc
tcaggagagtttggtaagtttgagagatactgggagggtcacgaaggaagggcagttgga
ggcattggaggaggaggatggttctttggcacctacccagccagagaaagaggaaacagt
ataaacagtagagatgactcctttttgggattgggtggtggagaaagtagcttggggttt
ggtgcaggagcaggatggggatcaggaggcttaggatcaaaccagtggcctccaactcca
ttgactcccccacctcctcgaagatactggtctgttgataaattaccagtcaagactgaa
aagaaatctaaaagcaggtctcaagagaagagtcgaggccacacatcctgttcctgccag
tcaccccatcactctgccagcactcactccaaatggaatcgggtgacttctaggagtcag
gaggaactactcccccactgccacagtttcagcagcagcgtaaggcccaaacggcaatca
tccaaaccggatcgggctcagagccaggcaaaatctggaagccaatccaacctcaatgca
caaagaccacagcgctcagaccggtcccgacaaccgccatcccctcctcagagtctacca
ccttctttaccctctccaatggtccctgcactcccagcaccaccctcttcctctcaccat
atacatgtaccaccacctacatcctcttcctctgtgtcctccccttcagttgtctcatct
acacctggtgccccacagccctcctctttgtcctcctctagtgctaagctccaataccag
aaactgcggtcagttccccaaccccaaaggtatcaatccccacatcttcccctcaaaacc
aagagcctatgctcccgtcgaggctctgcccaattctccagtgtggagagtgaggtttga
DBGET
integrated database retrieval system
