KEGG   Ctenopharyngodon idella (grass carp): 127501536
Entry
127501536         CDS       T08802                                 
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127501536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cide03021]
    127501536
   03036 Chromosome and associated proteins [BR:cide03036]
    127501536
Transcription machinery [BR:cide03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127501536
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    127501536
   PBAF complex
    127501536
   GBAF(ncBAF) complex
    127501536
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM SWIRM-assoc_1 SWIRM-assoc_3 Myb_DNA-binding Myb_DNA-bind_6 DUF919
Other DBs
NCBI-GeneID: 127501536
NCBI-ProteinID: XP_051729505
LinkDB
Position
19:complement(8468519..8487469)
AA seq 972 aa
MATQSIGSAVAGPTTSQAGCSSSLSRRMDGGPCCKFWENPEIISQMETVRSWIGKHYKKY
VQTDAPSSKSLSGLVIQLLQFQEDTFGRRANNPSFTKLPVKCFQDLRPGSALCHILGSVY
KFKTEQGWRRFDLQNPSRMDRNVEMFVCVEKTLIQNNLISRPVVYLSPDLEQKQALKLKD
IVVRHQGTVTEERSQATHQVYPSSSTADEEEWLRPVMRLDRHVMVHWGMCPDSYDSLISA
NDIDGEVEEPPNPDRCWKVHARWILDTDTYNEWMNEEDYEIDENGNSMSFRRRIYQSTEE
QKPGKKRRRSPSPPSSESKKKGGKKSSGVYKRRGQPEEAEPEEDLTKDMEDPTPVPNMEE
VILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEQREYGRGMEGEESATEQT
HHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYL
TSTSCRRNLTGDVCALIRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDTPSGL
VPLQHRPLQVSASQHMLHFPEKSTEKPSDLQNFGLRTDIYAKKHPKSKGANAGREWTEQE
TLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPVP
FSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRAREEAPPELFNASFHKAQRVRHN
LDPAFTLQTGGIAGLDADHSEKPDGSGIEPMNTEYDQHEKLEGDSILGEGERVKNEEKEE
SEGERGEESTAEESFDMALTQGEGEEMKRRVELDLVEGNIATAAAAALASAATKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQ
VKYAELKARQNMEPQQQAGATQSSSTAYNPLQHGRSVGSAGAGQMMGARQPGAPNGMYQT
PPSSQADGAAPM
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggccacacaatccataggatctgctgttgcgggacctacgacaagtcaagctggttgc
agctcttcattgagccgaagaatggacggtggaccgtgctgtaaattctgggagaacccg
gaaataatctctcagatggaaacagtgcgcagctggattgggaagcattataaaaagtat
gtgcagactgatgctccctccagcaagtctctgtctgggctggtcatccaactgctgcaa
tttcaggaagacacatttggccggcgagcaaataacccaagctttacaaaactcccagta
aagtgttttcaggacctgaggccgggaagtgctctctgtcatattctgggatcagtgtac
aagtttaagacagaacagggctggagacgctttgatcttcagaatccatccagaatggat
cgcaatgtagagatgttcgtctgtgtggagaaaactctgatacagaataacttaataagc
agacctgtggtgtacctgtcccctgatcttgaacagaagcaagcacttaaactcaaagac
attgttgtgcgacaccagggcacagtgacagaggagaggtcacaagccacccaccaggta
tacccatcatcctccacagcagatgaagaagagtggcttcgaccagtcatgcgattggat
cggcatgtgatggtacattggggcatgtgtccagacagttatgactcccttatatcagca
aatgatatagatggagaagtggaggaacctcccaacccagacaggtgctggaaggttcat
gccagatggattctcgacacagacacatataatgagtggatgaatgaggaagactatgag
attgacgagaatgggaatagtatgagtttccgcaggcgtatctaccaaagcacagaggaa
cagaaacctgggaagaaaaggcgtcgctccccctctccaccatcctctgagtctaagaag
aaaggaggaaagaaaagctcaggggtgtataagaggcgtggccaaccagaagaggctgag
ccagaggaggacctcactaaagacatggaggatcccacgccagtccctaacatggaggag
gtcattttgcctaaaaatgtgaacctaaaaaaagacagtgaaaacactccagtcaaagga
ggcattatggctgatttagatgaccaggaagaggacctgctctctggtgtcagagatgag
gaagagcagagggagtacggccgtgggatggagggggaggagagtgccacagagcaaacg
catcacattattgtgcccacctatgcctcatggttcgactacaattgtattcatcagata
gagagacgagctctgcccgagttcttcaatgggaaaaataagtccaaaacaccagaaata
tatcttgcataccgcaacttcatgattgacacataccggctaaaccctcaggagtatctg
acctcaacctcctgcagacgaaacctgacaggagatgtgtgtgcacttataagggttcat
tcatttttggagcagtgggggttgataaattatcaggtagatgcagaaagtcgacccctc
cccatgggcccacccccaacgccacactttaatgttcttacagacacaccgtccggactt
gtcccactacaacacagacccttacaggtttcagcttctcagcatatgttgcatttccca
gagaaatcgacagaaaaaccatctgacctgcagaattttggtctacggactgacatttat
gctaagaaacatccaaagagtaaaggcgcaaatgcagggagagaatggacagaacaggaa
acactcttgcttttggaggctttggagatgtataaagatgactggaataaggtgtcggag
cacgtgggtagccgcacacaggatgactgtattcttcacttcttgcggttgcccatagag
gacccgtacctagagaactctgaagcctcaatgggtcctctggcctatcaacctgtcccc
ttcagccagtcagggaaccctgtaatgagcactgttgctttccttgcatctgtggtcgac
cctcgagtggcctccgcagctgccaaagcagctttagaggagttctcgagagcaagagaa
gaggccccgccagagttattcaatgctagctttcacaaggcacagagagttaggcataat
ttagatccggcctttacactccaaactggcggcattgcaggacttgatgctgaccattca
gaaaagcctgatgggagtggcatagaaccaatgaacactgaatatgatcagcatgaaaag
cttgagggtgacagcatcttgggagagggagagcgtgtgaagaatgaggagaaagaagag
agtgaaggagagagaggagaggagagcacagcagaggagagttttgacatggccctcacc
caaggggagggggaggagatgaagaggagggtggagcttgatctggtggagggaaacatc
gcaacagctgctgctgcagcactggcctctgcagctaccaaagcaaagcacttggcagca
gtagaagagaggaagatcaaatctcttgtggctctgttggttgagactcagatgaaaaag
ttggagatcaaactgagacactttgaagagctagagaccattatggatcgagaaaaagag
gctctggagcagcagagacaacagttattgtctgagaggcagaacttccacctggagcag
gtgaaatatgccgagctgaaggcacgacagaacatggaaccgcagcagcaagcaggagcc
acacagagcagcagtactgcatacaaccctcttcaacacggtcgttcggtgggcagtgct
ggtgctggacagatgatgggtgctcggcagcctggagctcccaatggcatgtaccaaact
ccaccgtcctcacaggctgatggggccgcccccatgtaa

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