Ctenopharyngodon idella (grass carp): 127501536
Help
Entry
127501536 CDS
T08802
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127501536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127501536
03036 Chromosome and associated proteins [BR:
cide03036
]
127501536
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127501536
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127501536
PBAF complex
127501536
GBAF(ncBAF) complex
127501536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
127501536
NCBI-ProteinID:
XP_051729505
LinkDB
All DBs
Position
19:complement(8468519..8487469)
Genome browser
AA seq
972 aa
AA seq
DB search
MATQSIGSAVAGPTTSQAGCSSSLSRRMDGGPCCKFWENPEIISQMETVRSWIGKHYKKY
VQTDAPSSKSLSGLVIQLLQFQEDTFGRRANNPSFTKLPVKCFQDLRPGSALCHILGSVY
KFKTEQGWRRFDLQNPSRMDRNVEMFVCVEKTLIQNNLISRPVVYLSPDLEQKQALKLKD
IVVRHQGTVTEERSQATHQVYPSSSTADEEEWLRPVMRLDRHVMVHWGMCPDSYDSLISA
NDIDGEVEEPPNPDRCWKVHARWILDTDTYNEWMNEEDYEIDENGNSMSFRRRIYQSTEE
QKPGKKRRRSPSPPSSESKKKGGKKSSGVYKRRGQPEEAEPEEDLTKDMEDPTPVPNMEE
VILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEQREYGRGMEGEESATEQT
HHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYL
TSTSCRRNLTGDVCALIRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDTPSGL
VPLQHRPLQVSASQHMLHFPEKSTEKPSDLQNFGLRTDIYAKKHPKSKGANAGREWTEQE
TLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPVP
FSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRAREEAPPELFNASFHKAQRVRHN
LDPAFTLQTGGIAGLDADHSEKPDGSGIEPMNTEYDQHEKLEGDSILGEGERVKNEEKEE
SEGERGEESTAEESFDMALTQGEGEEMKRRVELDLVEGNIATAAAAALASAATKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQ
VKYAELKARQNMEPQQQAGATQSSSTAYNPLQHGRSVGSAGAGQMMGARQPGAPNGMYQT
PPSSQADGAAPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaatccataggatctgctgttgcgggacctacgacaagtcaagctggttgc
agctcttcattgagccgaagaatggacggtggaccgtgctgtaaattctgggagaacccg
gaaataatctctcagatggaaacagtgcgcagctggattgggaagcattataaaaagtat
gtgcagactgatgctccctccagcaagtctctgtctgggctggtcatccaactgctgcaa
tttcaggaagacacatttggccggcgagcaaataacccaagctttacaaaactcccagta
aagtgttttcaggacctgaggccgggaagtgctctctgtcatattctgggatcagtgtac
aagtttaagacagaacagggctggagacgctttgatcttcagaatccatccagaatggat
cgcaatgtagagatgttcgtctgtgtggagaaaactctgatacagaataacttaataagc
agacctgtggtgtacctgtcccctgatcttgaacagaagcaagcacttaaactcaaagac
attgttgtgcgacaccagggcacagtgacagaggagaggtcacaagccacccaccaggta
tacccatcatcctccacagcagatgaagaagagtggcttcgaccagtcatgcgattggat
cggcatgtgatggtacattggggcatgtgtccagacagttatgactcccttatatcagca
aatgatatagatggagaagtggaggaacctcccaacccagacaggtgctggaaggttcat
gccagatggattctcgacacagacacatataatgagtggatgaatgaggaagactatgag
attgacgagaatgggaatagtatgagtttccgcaggcgtatctaccaaagcacagaggaa
cagaaacctgggaagaaaaggcgtcgctccccctctccaccatcctctgagtctaagaag
aaaggaggaaagaaaagctcaggggtgtataagaggcgtggccaaccagaagaggctgag
ccagaggaggacctcactaaagacatggaggatcccacgccagtccctaacatggaggag
gtcattttgcctaaaaatgtgaacctaaaaaaagacagtgaaaacactccagtcaaagga
ggcattatggctgatttagatgaccaggaagaggacctgctctctggtgtcagagatgag
gaagagcagagggagtacggccgtgggatggagggggaggagagtgccacagagcaaacg
catcacattattgtgcccacctatgcctcatggttcgactacaattgtattcatcagata
gagagacgagctctgcccgagttcttcaatgggaaaaataagtccaaaacaccagaaata
tatcttgcataccgcaacttcatgattgacacataccggctaaaccctcaggagtatctg
acctcaacctcctgcagacgaaacctgacaggagatgtgtgtgcacttataagggttcat
tcatttttggagcagtgggggttgataaattatcaggtagatgcagaaagtcgacccctc
cccatgggcccacccccaacgccacactttaatgttcttacagacacaccgtccggactt
gtcccactacaacacagacccttacaggtttcagcttctcagcatatgttgcatttccca
gagaaatcgacagaaaaaccatctgacctgcagaattttggtctacggactgacatttat
gctaagaaacatccaaagagtaaaggcgcaaatgcagggagagaatggacagaacaggaa
acactcttgcttttggaggctttggagatgtataaagatgactggaataaggtgtcggag
cacgtgggtagccgcacacaggatgactgtattcttcacttcttgcggttgcccatagag
gacccgtacctagagaactctgaagcctcaatgggtcctctggcctatcaacctgtcccc
ttcagccagtcagggaaccctgtaatgagcactgttgctttccttgcatctgtggtcgac
cctcgagtggcctccgcagctgccaaagcagctttagaggagttctcgagagcaagagaa
gaggccccgccagagttattcaatgctagctttcacaaggcacagagagttaggcataat
ttagatccggcctttacactccaaactggcggcattgcaggacttgatgctgaccattca
gaaaagcctgatgggagtggcatagaaccaatgaacactgaatatgatcagcatgaaaag
cttgagggtgacagcatcttgggagagggagagcgtgtgaagaatgaggagaaagaagag
agtgaaggagagagaggagaggagagcacagcagaggagagttttgacatggccctcacc
caaggggagggggaggagatgaagaggagggtggagcttgatctggtggagggaaacatc
gcaacagctgctgctgcagcactggcctctgcagctaccaaagcaaagcacttggcagca
gtagaagagaggaagatcaaatctcttgtggctctgttggttgagactcagatgaaaaag
ttggagatcaaactgagacactttgaagagctagagaccattatggatcgagaaaaagag
gctctggagcagcagagacaacagttattgtctgagaggcagaacttccacctggagcag
gtgaaatatgccgagctgaaggcacgacagaacatggaaccgcagcagcaagcaggagcc
acacagagcagcagtactgcatacaaccctcttcaacacggtcgttcggtgggcagtgct
ggtgctggacagatgatgggtgctcggcagcctggagctcccaatggcatgtaccaaact
ccaccgtcctcacaggctgatggggccgcccccatgtaa
DBGET
integrated database retrieval system