Ctenopharyngodon idella (grass carp): 127501586
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Entry
127501586 CDS
T08802
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127501586
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127501586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
NCH1
Motif
Other DBs
NCBI-GeneID:
127501586
NCBI-ProteinID:
XP_051729591
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All DBs
Position
19:17332969..17360318
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AA seq
966 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFLISFGPFAIFYLAFYILCFIGGGFVVLLLFGKTNSEKHLE
RCEHSYLPSTQPAILKVSEEMKSESKPIKIDRRLTGSNIIDEPLQQVIQFALRDYIQYWY
YTLSDDETFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLN
EREDPKQRDAPEELLDSFFEAEVEMERNICRDMVCMSRKDEEGYLRDLCEVLLYLLLPSG
DFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIHDSSCNYEAFLNILKLTDK
PPELEAVKDKVLEELQHLRSLDTGAEDINIIKNQMNSLLFVKKVCETRIQRLQSGKEVDA
LKLAANFGKLCVIPLEHILVHNIALQFFMDYMQHMGGQAVLFFWLTVEGYRVTAQQQLEV
LQSSQRDGKKQSTQTTKGLLRAAAVGVYDQYLSEKASPRVQVDEASVTRLAQKLSKEDPT
PEIFDEIQRKVYDMMLKDERYYPSFRQHPLYVRMLAELDMLKEPSFRGSDDGDGESFNGS
PTGSINLSLDDLSSGSVDESAQLHAFISDTVDAFLNQLPMAGVCNDHGKTYALYTITVIR
KNSDGSEDIWKTYRRYSDFHDFHMRITEQFESLGPILKLPGKKTFNNMDKEFLEKRKKDL
NSYLQLLLNPEMVKACPVLLPYVYDFLENKAYSKGKGEFARKMDTFVNPLRSSMRNVSNA
VKSLPDSLAEGVSKVSADVGQDFKKLGQDIKQSIFKVPPLLQKSDIDPEHCRVSAQLDDN
VDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIKATYGDTINRKIVDHVDYMTS
PEQVSDYVKRFRDSYWPNGILAETPPRRDKSLRMRTRVAAKTTLLGIMPDELKHIIGADT
TRKGILRVFDMFQHQSLNRRLVYVFLEGFLETLFPQYKFPELFVKLHSRSPRVLKYSQKM
RSLHKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtctgggagtcgtcctcttc
ctcatctcatttggaccctttgccatcttttatctggccttctacatcctctgtttcatt
ggagggggttttgtagtgctgcttttatttggaaagacaaactcagagaagcacctggaa
aggtgcgaacactcctacctgccatctacacagccggccatactgaaggtttcggaagag
atgaaatcagagtccaaacccatcaagatcgaccgtcgtctgacaggatccaatatcata
gatgagccactgcagcaggtcatccagtttgctttgagggactatatccagtattggtac
tacacactgagtgatgatgaaacgttcctcttggagatccgtcagacagtccagaacgcc
ctcgtccagttctccaccaggtctaaagaggtggactggcagccgtatttcaccaccaga
ctggtggatgattttgcaactcatctgcgtgttttcaggaaagctcaagagaggctgaat
gagagagaagatcctaaacaacgtgacgctcctgaggagctgctggactcgttttttgag
gcggaggtagaaatggagaggaatatttgtagagacatggtgtgcatgtcacgcaaggat
gaagaaggttacctgcgggatctctgtgaggtgctgctgtacctgttactaccttctgga
gatttccacaacaagaatatgagatacttcctcagggaagttttggccagaggagtcctg
ctgcccttaattaaccagctcagtgaccctgattacatcaatcagttcgtcatctggatg
attcatgactcaagctgtaactatgaggccttcttgaacatcttaaagctgaccgacaaa
cctcccgagctggaggccgtcaaagacaaagtcctggaggagcttcagcatctccgatct
ctggacacgggcgcagaagatatcaacataataaagaatcaaatgaatagtttgcttttt
gtgaagaaagtctgtgaaacacgaatacaaaggctacaatcaggaaaggaagttgacgct
ttgaaactcgcagctaattttgggaagttgtgcgtgattccgttggaacatatcctagtg
cataacatcgcgctgcagttcttcatggactacatgcagcacatgggcggtcaggcagtt
ctgttcttctggctgacggtggagggttatcgggtcacggcgcagcagcagttggaggtc
ttacagagcagccagagggatggaaaaaagcagagcacccagacaaccaaagggctgctg
agagccgctgcggtgggcgtctacgaccagtacctatctgagaaggcctctcctagggtg
caggtggatgaagcgtctgtaaccaggctggctcaaaaactcagtaaagaggatcccacg
cctgagatatttgatgagatccagagaaaggtgtatgatatgatgttgaaggatgagcgg
tattacccgtcttttaggcagcacccgctgtatgtgaggatgctggccgagctggacatg
ctgaaggaacccagtttcaggggatctgatgacggggacggagagtcattcaacgggtct
ccaacaggaagcattaatttatcattagatgatctcagcagcgggagcgtagatgagtct
gctcagcttcatgcatttatctctgatacagttgatgcttttctaaaccaacttcctatg
gcaggcgtttgtaacgatcatgggaagacgtacgccctctacaccatcaccgtcatacgc
aagaactccgacggcagtgaggacatctggaagacgtaccgccgctacagcgattttcac
gacttccacatgcgcatcacggagcagtttgagagccttggtccgattctcaagcttcct
ggcaaaaaaacctttaacaacatggacaaggagtttttggagaaaaggaagaaggacctg
aactcatatttacagttgctattgaatcctgagatggtaaaggcctgtcccgtgctgttg
ccctacgtctatgactttctggaaaacaaagcgtacagcaaaggcaaaggggaatttgca
cgcaagatggacacgtttgtgaatcctctccggagctccatgcggaatgtgtccaatgcc
gtgaagtcactgccggacagcctggccgagggagtgtccaaagtctcggcggacgtgggc
caggattttaagaaacttggccaggatattaaacaatccatatttaaggtgcctccttta
ctccagaagtctgacatcgatcccgaacactgccgcgtctcagcccagctggacgacaac
gtggatgataatattccactgagggtaatgttgctgttgatggacgaagtgtttgacctg
aaggagagaaatcagtggctgcggagaaacatcaaaaacctcttacagcagctaataaaa
gcgacgtatggagacacgattaacaggaaaatcgtggatcacgtcgactacatgacctct
cctgagcaagtgtctgattatgtgaagagattcagagactcttactggccgaacgggatt
ctcgccgagacaccgccccgcagagacaaaagcctccgcatgaggacgcgggtcgccgcc
aaaaccacactcttgggcattatgccggatgagttgaagcacatcatcggggcggacacc
acgcgcaagggcatcctgcgtgtcttcgacatgttccagcaccaatctctaaaccggcgg
ctggtctacgtctttctggagggcttcctggagaccttgtttcctcagtacaagttcccc
gagctgtttgtgaagctccactcgcgctcgccgcgtgtactaaaatattcacaaaaaatg
cgcagcttgcacaagaggtga
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