Ctenopharyngodon idella (grass carp): 127501604
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Entry
127501604 CDS
T08802
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127501604
Membrane trafficking [BR:
cide04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127501604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
LRR_5
Ig_3
ig
Ig_2
LRR_LRWD1
LRR_EndoS
LRRNT
LRR_Zer-1
V-set
Sp38
LRR_9
UPF0370
Motif
Other DBs
NCBI-GeneID:
127501604
NCBI-ProteinID:
XP_051729625
LinkDB
All DBs
Position
19:19378221..19387136
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AA seq
605 aa
AA seq
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MCVAADWRRLYWWVVLQWVVGVALSGPCAQRCDCLPKLLIVNCSSRQLASVPEGVPVNTH
ALNLSINHLKTLARRRFSGLTQLRELDLSDNMLTVIEVEAFTGLQNLLMLRLSRNRLKII
PVGAFSGLPNIQFLDISENEILVFLDDMFREMPSLQKLEASENDLVFISNRAFSGLANLQ
ELNLDRCNLTSVPVEALSQLTGLLQLRLCRLGLTTLPNNSFRQLVRLQELRVSHCPWLDS
LAANSLIGLNLTSLTLSHCNLSAVPYSPLHHLVYLRYLDLSYNPITTILSNLLGDLLRLQ
ELHLVGAGLLRVEPGAFRNLAFFRLLNVSDNRLATLEESAFHSVGTLEVLRLDGNPLACD
CRLLWVMRRRLRLGFDGHSPACGSPVQVQGRMFQDFTEVELPRLFTCRQARILTRKPQDV
RTDEGHTVLFFCAADGDPAPSIIWLNPKRSVLTGSGRIRVLPNGTLEVRYAQVQDSGYYL
CVASNAAGNDSVSVSLRVRGFPASTRNRSGPFFLEGWSFASGQAPVNGSQPFPFDVKTLV
IAVTMGFLSFLSSVAVCFIFMFFWSQSKGQIKHTATIDFVPRSSASASGGGRTTMETGRF
TMKLI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggctgctgattggaggaggctgtactggtgggtggtgctccagtgggtagtg
ggtgtggctctatcagggccgtgcgcccagcgctgcgactgtctgccaaagctcctgata
gtcaactgttcatcgagacaactcgcttctgttcccgagggcgtccctgtcaacacccac
gcgctcaacctgagcatcaaccacttgaagactctggcgaggcggcggttctctggcctg
acgcagttacgcgagctggacctcagcgacaacatgctgacggtgatcgaggtggaagcc
ttcaccggcctccagaacctcctcatgctaagactgtcccgcaaccggctgaagatcatt
ccagtcggagccttctctggccttcccaacattcagtttctggacatcagcgagaacgag
atcttggtgtttctggacgacatgttcagagagatgccgtctctgcagaaactggaggcc
agcgagaacgacctggtgttcatctcgaaccgtgctttcagcggcctggccaacctgcaa
gagctgaatctggacaggtgcaacctgacgtcggtgccggtcgaggccctgtcgcagctc
accggactcctgcagctgcgtctctgcagactcggactgacaacgcttcccaataactcc
ttccggcagctggtccgtctgcaggagctccgcgtgtctcactgcccctggttggactcg
ctggcggccaacagtctgatcggactcaatctcacgtcgctgacgctcagccactgcaac
ctgagtgctgtgccgtactccccgctgcatcacctcgtctacctgcgatacctggacttg
tcctacaatcccatcaccaccatcctttccaacctcctcggggatttgctgcgccttcaa
gagctacatttggttggtgcaggacttttgcgagtcgaaccgggtgctttccgcaacctc
gccttcttccggctcctcaacgtgtcggacaaccgtttggcaacgctggaggagtcggcg
ttccactctgttggtaccttggaggtccttcggttggacgggaacccacttgcgtgcgac
tgccgtctgctctgggtgatgcgcagacgcctgcggcttggcttcgatggacattcaccc
gcctgcggctcacctgtgcaggtacaaggccggatgttccaagacttcacagaggtcgag
cttcccaggctgttcacgtgccggcaggctcgcattctgacccgtaagccgcaggacgtt
cggacggatgaaggccacacggttctgttcttctgcgcggccgatggagacccggcgccg
tcgattatctggctaaatccgaaacgctcagtcctcaccggctcgggcaggatccgcgtc
cttcccaacgggaccctggaggtgcgttacgcgcaggtgcaggatagcggatactacctg
tgtgtcgcctcgaacgctgcagggaatgacagtgtctccgtgagcctgcgggtgcgcggg
tttccggcgtccactcgaaaccgttcaggtcccttctttctggagggctggagctttgca
tccggtcaagcgccagtcaacggatcgcaaccgtttccattcgacgtgaagacactagtg
atcgcggtaaccatgggcttcttgtcgttcctgagctcggtggctgtctgcttcatcttc
atgtttttctggagtcagagcaaaggacagatcaaacacacggcaacaatcgactttgtc
ccgcgcagctccgcgtcggcgtcaggaggtggacggacgaccatggagacgggcaggttc
accatgaaactgatctga
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