Ctenopharyngodon idella (grass carp): 127501610
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Entry
127501610 CDS
T08802
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127501610
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127501610
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
127501610
NCBI-ProteinID:
XP_051729650
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All DBs
Position
19:15861544..15871383
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AA seq
635 aa
AA seq
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MSAEISTIPTLQLYLDSLWSSSVGSHSSDINTTNAWVTATTPLYNPPVFCDVRMDPAQPS
PTPDESSELGSEFQTQLDLFLKLGFSQTQVRAALLKLGLNADTNRVLGELIQAAGESEER
EEPTASPVLVSRGDGSSKVRSAQNHSAPAVSSAPEELVEDEDALRPIVIDGSNVAMSHGN
KEVFSCLGIQLAVNFFLERGHIDITVFVPSWRKEQPRPDVPITDQHILRELERRKLLVFT
PSRRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVN
DKFMPPDDPLGRHGPTLDNFLRKTPRMPKKQPCPYGKKCTYGIKCKFHHPERTKQSQRAL
ADELREKAKISSTPHKPQPLSSQTPSLEEVMEQKLSLDMCGSLKKSYASENVLVIKGVPQ
PTQRKFPSKKERRHSPTSLDSFPSGSQECMDSGLGSYECHSQEAPHCDRYCDHRKSKPSS
NGRHRYAPANSQPCSCCSYQSLSASQHHSSSSNPGYSQPRYHSYGGGPIYPPVNISQYSF
PHSRGPPPHQGYWSDHYGGYPPTSHNAMQPERGHGHWSPSNHNSQWSEREQVRKKLLAIF
NARLVDRAMDMFPYLLDPQRLAAEILTLQSQDGAL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaaatcagcaccatccccacgttacagttgtatttggattccctttggtca
tccagcgtaggatctcacagctctgacataaacaccaccaacgcatgggtaacagcaact
acgcctctgtacaaccctcccgttttctgcgacgttagaatggatccggctcagcccagc
ccgactccagatgaatcctcagaactggggtctgagtttcagacgcagctcgacctgttc
ctcaagctggggttttcccaaacacaggtccgcgctgctttactgaaactaggcctcaac
gcagacaccaacagggttctgggagagctgatacaggctgctggggaatctgaagagaga
gaggaacctacagcctccccggtgctggtttcacgtggggatggttccagtaaggtccga
agcgcccaaaatcacagcgctccggcagtgtcgagtgctccggaagagctggtagaggat
gaggacgcactcagacctatagtcattgatgggtctaatgtagccatgagccacgggaac
aaggaagttttttcctgtctgggaattcagttggcagtgaactttttcctggagcggggt
cacattgacatcacagtgtttgtgccttcctggagaaaagaacagccacgacctgatgtt
cccattacagatcagcacattctgcgggaattagaacggaggaagctcttggtgttcaca
ccgtccagaagggtggccggaaaacgggtggtttgctatgacgaccgttttatcgtgaag
ctggcgtacgaatccgacggcatcattgtatccaatgacacttaccgagatctgcaagga
gaacgtcctgagtggaagcgtttcatagaggagaggcttctgatgtactcgttcgtcaat
gacaagtttatgcctccagatgaccctttgggaagacatggacccaccctcgacaacttt
ctgagaaaaaccccacgtatgcctaagaaacagccctgtccttacggaaagaagtgcact
tacggaatcaagtgtaagttccatcatccggagcgaaccaagcaatcccagcgtgccctg
gccgatgagctccgagagaaagccaaaatttcatccacaccgcacaaacctcagccgctt
tccagtcagactccgtctctggaggaagttatggaacagaaattatccctcgacatgtgc
ggatctctcaagaagagttacgccagtgaaaatgtccttgtcattaaaggagtcccccag
ccaacgcaaaggaagtttccttcaaaaaaagaacgtcggcattcgccaacaagcctggat
tcttttcccagcggatctcaagagtgtatggattctggcttgggttcctacgaatgtcat
tctcaagaagctccacattgcgatcgctactgcgaccacaggaagtccaaaccatccagc
aatgggcggcatcgctacgctccggccaatagtcaaccctgcagttgctgttcctaccaa
tccctgagtgccagtcagcaccacagcagctcatcaaacccgggttacagtcaacctcgc
tatcactcatacggcggaggtccaatttaccctcccgtcaacatatcccagtattcattt
ccacacagcagagggcctcctccccaccagggctactggtccgaccattatggtggctat
cctccaacatcccacaatgccatgcagccagagagaggacatggacactggtccccatcc
aatcacaattctcagtggtccgaacgggagcaggtgaggaagaaattacttgcaattttc
aatgcacgtttggtggacagggccatggacatgttcccatatctcttggacccacaaaga
ctggcagcagagattttgacccttcagtctcaggacggggctttatga
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