KEGG   Ctenopharyngodon idella (grass carp): 127501610
Entry
127501610         CDS       T08802                                 
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127501610
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     127501610
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 127501610
NCBI-ProteinID: XP_051729650
LinkDB
Position
19:15861544..15871383
AA seq 635 aa
MSAEISTIPTLQLYLDSLWSSSVGSHSSDINTTNAWVTATTPLYNPPVFCDVRMDPAQPS
PTPDESSELGSEFQTQLDLFLKLGFSQTQVRAALLKLGLNADTNRVLGELIQAAGESEER
EEPTASPVLVSRGDGSSKVRSAQNHSAPAVSSAPEELVEDEDALRPIVIDGSNVAMSHGN
KEVFSCLGIQLAVNFFLERGHIDITVFVPSWRKEQPRPDVPITDQHILRELERRKLLVFT
PSRRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVN
DKFMPPDDPLGRHGPTLDNFLRKTPRMPKKQPCPYGKKCTYGIKCKFHHPERTKQSQRAL
ADELREKAKISSTPHKPQPLSSQTPSLEEVMEQKLSLDMCGSLKKSYASENVLVIKGVPQ
PTQRKFPSKKERRHSPTSLDSFPSGSQECMDSGLGSYECHSQEAPHCDRYCDHRKSKPSS
NGRHRYAPANSQPCSCCSYQSLSASQHHSSSSNPGYSQPRYHSYGGGPIYPPVNISQYSF
PHSRGPPPHQGYWSDHYGGYPPTSHNAMQPERGHGHWSPSNHNSQWSEREQVRKKLLAIF
NARLVDRAMDMFPYLLDPQRLAAEILTLQSQDGAL
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgagtgctgaaatcagcaccatccccacgttacagttgtatttggattccctttggtca
tccagcgtaggatctcacagctctgacataaacaccaccaacgcatgggtaacagcaact
acgcctctgtacaaccctcccgttttctgcgacgttagaatggatccggctcagcccagc
ccgactccagatgaatcctcagaactggggtctgagtttcagacgcagctcgacctgttc
ctcaagctggggttttcccaaacacaggtccgcgctgctttactgaaactaggcctcaac
gcagacaccaacagggttctgggagagctgatacaggctgctggggaatctgaagagaga
gaggaacctacagcctccccggtgctggtttcacgtggggatggttccagtaaggtccga
agcgcccaaaatcacagcgctccggcagtgtcgagtgctccggaagagctggtagaggat
gaggacgcactcagacctatagtcattgatgggtctaatgtagccatgagccacgggaac
aaggaagttttttcctgtctgggaattcagttggcagtgaactttttcctggagcggggt
cacattgacatcacagtgtttgtgccttcctggagaaaagaacagccacgacctgatgtt
cccattacagatcagcacattctgcgggaattagaacggaggaagctcttggtgttcaca
ccgtccagaagggtggccggaaaacgggtggtttgctatgacgaccgttttatcgtgaag
ctggcgtacgaatccgacggcatcattgtatccaatgacacttaccgagatctgcaagga
gaacgtcctgagtggaagcgtttcatagaggagaggcttctgatgtactcgttcgtcaat
gacaagtttatgcctccagatgaccctttgggaagacatggacccaccctcgacaacttt
ctgagaaaaaccccacgtatgcctaagaaacagccctgtccttacggaaagaagtgcact
tacggaatcaagtgtaagttccatcatccggagcgaaccaagcaatcccagcgtgccctg
gccgatgagctccgagagaaagccaaaatttcatccacaccgcacaaacctcagccgctt
tccagtcagactccgtctctggaggaagttatggaacagaaattatccctcgacatgtgc
ggatctctcaagaagagttacgccagtgaaaatgtccttgtcattaaaggagtcccccag
ccaacgcaaaggaagtttccttcaaaaaaagaacgtcggcattcgccaacaagcctggat
tcttttcccagcggatctcaagagtgtatggattctggcttgggttcctacgaatgtcat
tctcaagaagctccacattgcgatcgctactgcgaccacaggaagtccaaaccatccagc
aatgggcggcatcgctacgctccggccaatagtcaaccctgcagttgctgttcctaccaa
tccctgagtgccagtcagcaccacagcagctcatcaaacccgggttacagtcaacctcgc
tatcactcatacggcggaggtccaatttaccctcccgtcaacatatcccagtattcattt
ccacacagcagagggcctcctccccaccagggctactggtccgaccattatggtggctat
cctccaacatcccacaatgccatgcagccagagagaggacatggacactggtccccatcc
aatcacaattctcagtggtccgaacgggagcaggtgaggaagaaattacttgcaattttc
aatgcacgtttggtggacagggccatggacatgttcccatatctcttggacccacaaaga
ctggcagcagagattttgacccttcagtctcaggacggggctttatga

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