Ctenopharyngodon idella (grass carp): 127501677
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Entry
127501677 CDS
T08802
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127501677
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127501677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127501677
NCBI-ProteinID:
XP_051729776
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Position
19:complement(21690534..21693718)
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AA seq
445 aa
AA seq
DB search
MSFPQLGYPQFLNASQEVYGAERTGVMPSSPREGSSENSANPATAAAAITPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHTAPGFYPYGQYQYGDPAR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRIFDSDNEDDADKNDDEEEIDLETIDIDKAEEPRGDQNQETSDNQPER
ESVETPRILSSPALKNMDSPVSSSNKEQSVVKSVGEVSPGGPVCQRPGNSKPKIWSLAET
ATSPDNTQKLGVSSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMGV
RSLLSQNSNFPNHSPVTNPEKKPSSASGSPCLDSDNSSDSFSLKHNDQENVQRIESPTLA
SRPPFPVIHDRSHHETSQRALKTIS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagttgggttacccacagttcctaaacgcttcccaagaggtgtacgga
gctgagcgcacgggtgtcatgccgtcctctccacgcgagggaagctcggagaacagcgca
aatcccgcgactgcagcagctgctatcacgccaatgctcggcatgtacgcgaatccgtgg
accgtgcaaaactatagcgccttcttaccttacaacagtgccgagctggccctgctgtct
cagatggggtcgcagtatgagttgaaggataaccccggggctcacccaccaggatttgca
gttcatacagcgcccggtttttacccatacggccagtaccagtacggagatccggcccgg
gccaagagcgctaccagagagacaaccagcacactgaaagcatggctgcaggaacataaa
aagaacccgtaccccaccaagggtgagaagatcatgctggccatcatcactaagatgacc
ctcacgcaggtgtccacctggttcgcgaacgcgcgccggagactcaagaaggagaataaa
gtgacctggggtcgcagtgccgaggacagagacggacgaattttcgacagcgacaatgag
gacgacgcggacaaaaatgacgacgaggaagaaatcgatctggagaccatcgatattgac
aaagctgaggagcccagaggagatcagaaccaggaaacctcggataatcaacccgagaga
gaaagcgtggaaacaccgcggatattatcctcaccagcacttaaaaacatggacagccct
gtgtcgagtagtaataaagaacaaagtgtggtcaaaagcgtcggtgaggtgtctcctggt
ggaccagtgtgtcagaggcctggaaacagcaaacccaaaatctggtctttggcggagacg
gcgacaagtcccgataacacgcagaaactcggtgtctcctcgacgcctgcaggcctcagg
gcctcaccctcgacccatccagctttcctctccactaacggaatttatacttgccagatt
gggaaactacacaactgggcgagcgcagctttcctcagtgcaaattctctgatgggggta
cgctcacttttgagtcaaaacagtaacttcccaaaccacagccccgttacgaaccccgaa
aagaaaccgtcgtctgcctctgggtctccatgtctagacagcgacaactcatccgacagt
ttcagtctcaaacataatgatcaagagaacgttcagagaattgaatctccaacacttgcg
tccagaccaccgtttccagtcatccatgacaggtctcatcatgaaacatcacaacgcgct
ctgaagactatttcatga
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