Ctenopharyngodon idella (grass carp): 127501835
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Entry
127501835 CDS
T08802
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127501835
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127501835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
KATNA1_MIT
Motif
Other DBs
NCBI-GeneID:
127501835
NCBI-ProteinID:
XP_051730024
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All DBs
Position
20:31104188..31112618
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AA seq
525 aa
AA seq
DB search
MDDLEAELNIAHDAPEDDSTSQERLQMPVYIQYQTNEKGVPSATSFLKTNRKCLKQIRDA
MLLHNWQEASVYYNNYIQTLEAMSYTKIHPTTFEITWRIGTEILRHLPNSNAEDFSAVNE
QLKYNGVTDFSKICLEHSFHLLLNGQMDEAKRQLSIRQSWRRGNISIAQGDTKKLIQAYC
GFLDYLIWCKKKSSVPGTDEASSNHEIHSCFRQASVTLKEIISQPGIWDPFVLSYIDMLE
FYNDEDGALEILENYAYNKDFPINPNAHVYLYHFLKRHNAPEAKLIGSLMVLRTLVPSHE
LMLELCSLLLRTSQMSDLEDAFSISMDLLEFSSWKCDIKAWSCLLNIMKILKQKKCKETI
KKEWKSRRPLWFPLHFRSYISKKDIVENISLVKVKREVLKIVGEYSSVYNKMALEFEIKF
GSVTEEYTLRKNKKMEKVKKMMEKEKKKREKEKMKMEKEKEKMEREKLKMEKKKLKMEKR
KLKMEKKKMEKEKMEKEKMKMVKEKLKLKKVKKKMKKTKKSKYNL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctagaggctgagctcaatatcgcacatgatgctccagaggatgacagcaca
agtcaggaacggcttcaaatgcctgtttacatccagtatcagacgaacgagaaaggtgta
ccctcagcgacgagctttctcaagacgaacagaaagtgtctaaagcagatcagagatgcg
atgctgcttcataactggcaggaggcttcggtatattacaacaattacattcagacactg
gaggccatgagttacacaaaaatacatccaacgacttttgagatcacgtggagaataggc
acagaaattctgcgtcatctccctaactccaacgctgaagatttcagcgctgtaaatgaa
cagttgaaatacaatggagttacagacttctcgaagatctgtttggagcatagctttcat
ctcctgctgaacgggcagatggatgaagccaagcggcagttgtccatcagacagagctgg
agacgtggcaatatctcgatcgctcagggcgacaccaaaaaactcatccaagcctactgc
ggtttcctagattacttgatctggtgtaagaagaagtcctctgttcctggaaccgatgag
gcgagcagtaaccatgagatacacagctgcttcagacaagcttctgtgaccctgaaggaa
atcatcagtcagcctggaatctgggacccgtttgtgttgagttacattgatatgctggag
ttttacaacgatgaggacggcgctctggagattctggagaattacgcttacaacaaggat
ttcccaatcaatcccaacgctcatgtgtacctgtaccatttcctcaagagacacaatgcc
ccagaagccaaactcatcggttcattaatggttctgcgcactttagtcccgagtcatgaa
ctgatgctggagctctgctctctcctgctgcgcaccagtcaaatgagtgatctagaagat
gctttctccatttcaatggaccttctggagttttccagttggaaatgtgacataaaggct
tggtcctgtcttctgaatatcatgaagatactcaaacagaaaaaatgcaaggagactata
aaaaaggaatggaaatccaggcgaccgctgtggttccccttacacttcagaagctatatc
tccaagaaggacattgtcgagaacatcagccttgtgaaggtcaagagagaagttttgaag
atagtaggcgaatactcttcagtatacaataaaatggctttggaatttgagataaagttt
ggaagtgtaacagaggaatacacactcaggaagaacaaaaagatggagaaggtaaagaag
atgatggaaaaggagaagaaaaagagggagaaggaaaagatgaagatggagaaggaaaag
gaaaagatggagagggaaaagttgaagatggagaagaaaaagttgaagatggagaagaga
aagttgaagatggagaagaaaaagatggagaaggaaaagatggagaaggaaaagatgaag
atggtgaaggaaaagttgaagttgaagaaggtgaagaaaaagatgaagaagactaagaag
tctaaatacaatttataa
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