KEGG   Ctenopharyngodon idella (grass carp): 127501928
Entry
127501928         CDS       T08802                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127501928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cide03041]
    127501928
Spliceosome [BR:cide03041]
 Complex C
  Other components
   Step II factors
    127501928
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 127501928
NCBI-ProteinID: XP_051730228
LinkDB
Position
20:31910544..31927166
AA seq 578 aa
MAAAVGALVSYGSDSDSENESESRTSPQKVEPDSVAHLQPLKSNIITTLAALNSAPEVAV
KEDVETGVHLDPALKEVTYNPTFETMFAPEFGPVNPFRSQQMAAPRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAVEEAEKNKGLTVFETGPKKSEKRKKV
KGGDAADIDSFLGPWAKYQDEKDVAKPSEDEQKELDEITAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHIPQDVGINLRSPDIPDKCYLPKKQLHVWTGHTKGVSAIRLFPASG
HLLLSCSMDCKIKLWEVYNERRCARTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS
ETGQCIARFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcggcggcggtgggtgccctcgtttcgtacggcagcgactcagattcggaaaatgag
tcagaatcccgtactagtccacagaaagtcgaaccagactcggtcgcgcatctccagcct
ttaaaatccaacattataacgactttagccgctctgaattcagcgcccgaggtcgccgtg
aaggaagatgttgagaccggtgtgcatcttgatccagcactcaaagaagtcacttacaac
cctacatttgaaaccatgtttgctccagagttcggaccagtgaacccgttccgatcccag
cagatggccgcaccgagaaacatgctgtctggttacgccgaaccggctcatgtgaacgac
ttcatgttcgagcagcagaggagaaccttctctacgttcggttacgctctggacccgtct
gtggacaccagtcaggtctcatccagcagctacattggagctgtagaagaagcggagaaa
aacaaagggctgacggtgtttgagacgggaccaaagaagtctgagaagaggaagaaggtg
aaaggaggagatgcggctgatatcgacagctttctgggcccttgggccaaatatcaggat
gagaaagacgtggccaaaccttctgaggatgagcagaaagagctggacgagatcacagcc
aagagacagaagagaggcaagaatgaagaagaagctccggcggaggagaagaccatcctt
cacattaaagacgcgtacgactatcagggccgttcatacctgcacattcctcaggacgtg
ggcatcaacctgcgctcgccggacatcccggataaatgctacctgcccaagaaacagctg
catgtgtggaccggacacactaagggtgtcagcgccatccggctgtttccggcgtctggt
catctgctgctgtcctgctctatggactgtaaaatcaagttgtgggaggtttataatgag
agaagatgtgcgcggacgtttattggtcacagtaaagcggtgcgtgacgtctgcttcaac
aacacgggcacgcagttcctcagtgccgcctatgacagatatctcaaactctgggactca
gagaccggtcagtgcatcgcccgcttcaccaacaggaaggttccctactgcgtgaagttc
aacccagatgaggacaaacaaaatctgtttgtcgccgggatgtcggacaagaagatcgtc
cagtgggacatccgctccggtgaggtcgttcaggagtacgacagacatctgggtgccgtc
aacaccatcaccttcgtggacgagaaccgccgcttcgtcagcacctctgacgacaaaagt
ctgcgcgtgtgggagtgggatattcctgtggacttcaaatacatcgctgagcccagtatg
cactcgatgcccgcggtcacactgtcgcccaatggtaagtggctggcctgtcagtccatg
gacaatcagatcctgatcttcggagctcaaaaccgattccgtctcaacaagaagaagatc
ttcaagggtcacatggtggcggggtacgcctgtcaggtggacttctctccggacatgagt
tacgtggtttcaggtgatgccgacgggaagttgaacatctgggactggaagacgactaaa
ctgtatcatcggatcaaagcgcacgataaggtgtgcatcagcgcgctctggcaccctcac
gagacgtccaaggtcatcacctgcggctgggacggacagatcaaactctgggactga

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