Ctenopharyngodon idella (grass carp): 127501928
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Entry
127501928 CDS
T08802
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127501928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127501928
Spliceosome [BR:
cide03041
]
Complex C
Other components
Step II factors
127501928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
127501928
NCBI-ProteinID:
XP_051730228
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Position
20:31910544..31927166
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AA seq
578 aa
AA seq
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MAAAVGALVSYGSDSDSENESESRTSPQKVEPDSVAHLQPLKSNIITTLAALNSAPEVAV
KEDVETGVHLDPALKEVTYNPTFETMFAPEFGPVNPFRSQQMAAPRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAVEEAEKNKGLTVFETGPKKSEKRKKV
KGGDAADIDSFLGPWAKYQDEKDVAKPSEDEQKELDEITAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHIPQDVGINLRSPDIPDKCYLPKKQLHVWTGHTKGVSAIRLFPASG
HLLLSCSMDCKIKLWEVYNERRCARTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS
ETGQCIARFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtgggtgccctcgtttcgtacggcagcgactcagattcggaaaatgag
tcagaatcccgtactagtccacagaaagtcgaaccagactcggtcgcgcatctccagcct
ttaaaatccaacattataacgactttagccgctctgaattcagcgcccgaggtcgccgtg
aaggaagatgttgagaccggtgtgcatcttgatccagcactcaaagaagtcacttacaac
cctacatttgaaaccatgtttgctccagagttcggaccagtgaacccgttccgatcccag
cagatggccgcaccgagaaacatgctgtctggttacgccgaaccggctcatgtgaacgac
ttcatgttcgagcagcagaggagaaccttctctacgttcggttacgctctggacccgtct
gtggacaccagtcaggtctcatccagcagctacattggagctgtagaagaagcggagaaa
aacaaagggctgacggtgtttgagacgggaccaaagaagtctgagaagaggaagaaggtg
aaaggaggagatgcggctgatatcgacagctttctgggcccttgggccaaatatcaggat
gagaaagacgtggccaaaccttctgaggatgagcagaaagagctggacgagatcacagcc
aagagacagaagagaggcaagaatgaagaagaagctccggcggaggagaagaccatcctt
cacattaaagacgcgtacgactatcagggccgttcatacctgcacattcctcaggacgtg
ggcatcaacctgcgctcgccggacatcccggataaatgctacctgcccaagaaacagctg
catgtgtggaccggacacactaagggtgtcagcgccatccggctgtttccggcgtctggt
catctgctgctgtcctgctctatggactgtaaaatcaagttgtgggaggtttataatgag
agaagatgtgcgcggacgtttattggtcacagtaaagcggtgcgtgacgtctgcttcaac
aacacgggcacgcagttcctcagtgccgcctatgacagatatctcaaactctgggactca
gagaccggtcagtgcatcgcccgcttcaccaacaggaaggttccctactgcgtgaagttc
aacccagatgaggacaaacaaaatctgtttgtcgccgggatgtcggacaagaagatcgtc
cagtgggacatccgctccggtgaggtcgttcaggagtacgacagacatctgggtgccgtc
aacaccatcaccttcgtggacgagaaccgccgcttcgtcagcacctctgacgacaaaagt
ctgcgcgtgtgggagtgggatattcctgtggacttcaaatacatcgctgagcccagtatg
cactcgatgcccgcggtcacactgtcgcccaatggtaagtggctggcctgtcagtccatg
gacaatcagatcctgatcttcggagctcaaaaccgattccgtctcaacaagaagaagatc
ttcaagggtcacatggtggcggggtacgcctgtcaggtggacttctctccggacatgagt
tacgtggtttcaggtgatgccgacgggaagttgaacatctgggactggaagacgactaaa
ctgtatcatcggatcaaagcgcacgataaggtgtgcatcagcgcgctctggcaccctcac
gagacgtccaaggtcatcacctgcggctgggacggacagatcaaactctgggactga
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