| Entry |
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| Name |
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
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| KO |
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| Organism |
cide Ctenopharyngodon idella (grass carp)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cide00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127501992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cide03019]
127501992
Messenger RNA biogenesis [BR:cide03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127501992
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
20:complement(22399325..22419711)
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| AA seq |
2360 aa
MAAVLQQILERSEIAKLQKTVLTKLEKYISDQQCEVDCLKAQQEQYRVDSEQQYFDIEKK
FAESQAQFVSQTQEHQILKEEFCKLEEELKCIREKNKEQASSYAKLESQQNELSKAKDEL
EAEKRELVRTLERRSQEMEHQSEDLKHLNDRLMEVNAEKMQLQLKLDGSEASEVSIKYKE
KRMEQEKDLLQGQVTWLNTELKAKSEELLSLSRQRGNEILELQCNLNNKEDEITHLQDQV
TSLKASNENLQRQAEEMITKMREAKEQQASLEEKFSNELNANIKLSNLYKGAAADAEAKG
EELSRAVEELHKLLKEAGEAHKALEVKMAELEDCKDKEIAELKEKISSQEKELENANELL
SDTKHRGTTSILTEEHVTTMSPTAAAVAKIIKPGMKLTEIYTAYVETQEQLQREKLENKR
LHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKEADEGNKR
ASVLERDNQRFEVQLADMAQQVRVLLIELEEARGNHVMREEDDVCSADVSSTSEVISQHL
VTFRSVEELQQQNQRLLVALRDLSEAKEKDELEVDTMKRSEVEKYLEDLQRELEQLKEKR
AQDLQKVDTVARQRDMFRMLLTQATGVSFPQGAGSEELMLTSTPRRSPAVTPTAGTPTGL
VASAIESTESVEAKAALKQLQEIFVTYKKEKTESEKALIEQSEKLQDQVTELRSENTKIS
TQLEFTSKRYEMLQDNVEGYRKEIASLNEKTQKQAAAIQQNEQTIHTLTQDRRATAEKLT
IVESEAENLRKERDMLKMVEIRLTQEKEIFQAQQLGQNMLLTNLKSIQATLERSETETRQ
RLTAQIEKQEREIAQLQKRLENEVEQKHLLTRNQDMQLMDAKKQLETQTAQHHRTREQLS
AAQLELNNLRLQISSGESRLVSHTVHTGLQGSEGDMEALRAQLKQAENKVEELAERLKNT
SASMEQYKAMSLSLEESLDKEKQVTEQVRSSVETQMESAQEQYKQLEQKLLEMDKEKQSL
QEEKSKAVAAVEEELSELRKSLSSLQAEHQSALERASVAAAQEQQAILDSEQQAKMAAEA
QDKYEREMLLHAADVEALQAAKAQALQAALLKQQLEEKVQSMSAQLLESRVSWEEQEKIL
KEEQCKLESRCEDLQRQNTLLHEQMQTLSGQMASQMQRAANESPLNISLTEEGKSQEQLL
EILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQESLSAERERMQVTAKTLS
QHDELMKKTETMNVLMETNKMLREEKEKLEQELQDTQAKVRKLESDILPMQESNAELSEK
SGMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEREAHLKRIQQLVEETSR
LKAEASRSSGTLTMLQSQVQNLRENLGKVMVERDNLKKDQDVKNLDIQEKMKTITQVKKI
GRRYKTQYEELKVEYDKSVAAAASAPAQDQEAQQASAQELQSLKESLNQSENRTRELEGH
LENLNRTVGEREAEARGAQEQASRLQGELTRLRQELQEKSSQEERLKQQLTEKEERTKKA
IVMAKQKISQLTVVKNQLQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQ
QERHGEQRDEPAEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLA
ATPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSEGPLEHV
TVYGSASGSVRSTSPNVQTNLAQPLLNVQQQSQATAFIQPTQQQTQPPAEPSNQEPPAAV
MLPTSQIDRPLSTSTGLWSATTSTSSASAVTASPSNALSKRPREEEQESMSADTQSQDEP
IDTPICKRVRIHRVGLEEEMLAEDSTEAESVVPGDNQEAPDAGQELERYTTMEMMMDEEP
GPSQSVPGDRLLPHSSDTHRSPDEPDHHVIVIVSDTDSEGDHEDESEEEEEEEEEEQDYE
EEDEEEDEEDDDDEEDGGIGEEGEESNEGSGSRDGNEAYEGDDTEVPDPTDPGTETEESL
GATDSTQRMADSQSFETSTLDVFDAPVTSSAPRPPQSPRRPQHPLPPRLNILAPPAQDLG
PPAQVQRLPVRRQSVGRGLQLTPGMASSAQQHFFEDDDRMVPSTPTLIPPRSDGFAEAIH
SPQIAGVSRFRFGPSDDLPQTSSSHSDLGQLPSQGLGMYDSSVYLGAHEEESGGRSVPTT
PLQIAAPVTILSETVPSEANEHASQSVPMVSTSTPGLSAPAGPSGVEERDDLFMDGGDSA
EASLEAVSQTEAEEPAQTSDEASLPSTSQEPSSSSADTSSSQPPKARTGSGRQWTSGRGS
RSFVKRGGPGVLGVRGRFAR |
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| NT seq |
7083 nt +upstreamnt +downstreamnt
atggcggctgtgttgcagcaaatattggagcggtcggagatagcgaaactccaaaaaact
gtcttgactaaattagagaagtacatttctgaccagcaatgtgaagttgattgtctgaag
gcacaacaggagcaatatcgtgtagatagtgaacaacaatattttgacatcgagaagaag
ttcgctgagagtcaggctcagtttgtgtcccagacccaagagcaccaaatactgaaagaa
gagttttgcaaattggaggaagagctgaaatgcatacgagagaaaaataaggagcaagcg
tcttcatacgccaaactagaatcacagcagaatgaactttctaaagccaaagatgagctt
gaggcggaaaaacgagagcttgtacggacattggaaagaagatcccaggagatggaacac
caaagcgaggatctgaagcatcttaatgatagattgatggaagtcaatgcagagaagatg
cagcttcagctaaaactggatgggtccgaagcctctgaggtctcaatcaagtataaagag
aagcgaatggagcaggagaaagatctactgcagggtcaagtaacctggctgaacaccgag
cttaaggctaagagtgaagagctgctgtctctttcacggcagagaggcaatgagatactg
gagctccaatgcaaccttaataataaggaggatgagatcacccacctccaagatcaggtg
accagtctgaaagcgtccaatgagaaccttcagaggcaagcagaggaaatgatcaccaag
atgagagaggctaaagaacagcaagccagtttggaggagaagttcagtaatgaactcaat
gccaacatcaagctctcaaatttgtataagggagcagcagctgatgccgaggccaagggt
gaggagctcagcagagcagttgaggaacttcacaaactgcttaaagaggctggagaggca
cacaaagctctggaagtgaagatggcagagctggaggattgtaaggataaggaaatcgct
gaactgaaagagaaaataagcagccaggagaaagagctggaaaatgcaaatgagctgttg
tctgacaccaaacacagaggaactacttcaattcttacagaggagcatgtgacaacgatg
tcccccactgcagctgcagttgccaaaatcatcaaaccaggcatgaaactcacagagata
tatacagcatatgtagagactcaagaacaactacaacgggagaaactagaaaacaaacga
ctgcacaagtatctggatgacattgtgcaggagatggaggcaaaggcacccatcctgaag
agacagagagaggagtacgagcgcatgcaaaagtctgtttccagtctctctgctaaacta
gagcaagctgtcacggaggtccaccgcttgcagaaagaagcagatgaaggcaacaaacgt
gcatctgtgttggagagagataaccagaggtttgaggtgcagctggctgacatggctcaa
caggtgcgggttctcctcattgagctggaggaagcacgtggtaaccatgtgatgcgtgag
gaggatgatgtgtgttcggcggacgtgagcagcacttcagaggtgatttctcagcacctg
gtcaccttccgcagcgttgaagaactgcagcagcagaaccagcgtctcctagtggctctc
agagacctcagtgaggcaaaggagaaggatgagttggaggtagacaccatgaaacgcagt
gaggtggagaaatatctcgaggatcttcagcgtgaattggagcagctgaaggaaaagaga
gctcaggacctgcagaaggttgacactgtggcacgacagagggacatgttccgcatgctt
ctgactcaggccactggagtatccttcccacagggtgctggttctgaggaacttatgctg
acctccactccccgccgttctccagctgtcacacctactgcaggcacccctacaggactg
gttgcctcggcgatagaatctactgagtcagtagaggccaaggctgcactgaagcagctt
caggaaatctttgtgacctataagaaggaaaaaactgagtccgaaaaggctctgattgag
caaagtgagaaactacaagatcaagtgactgaactccgctctgaaaacaccaagatttcc
acacagctggagttcacctccaaacggtatgagatgctccaggataatgtggagggctac
cgtaaggagattgcctctctgaatgagaagactcagaaacaggctgcagcaattcagcag
aacgaacagaccatacacaccctcacgcaggatcggcgagcaacagccgagaaactcacc
attgttgagtctgaagcagagaacctgcgtaaagagagagacatgctgaaaatggtggag
atcagactgacccaggagaaagagatcttccaggcccaacagctcggccagaacatgctg
ctgaccaacctcaaatcaatacaggcaactttagagcgctcagagactgagaccagacaa
cggctgactgctcagattgagaagcaggagcgagagattgctcagctccagaagagactc
gagaatgaggtggaacagaagcacctgctgacacgcaatcaagacatgcagctgatggat
gctaagaagcagcttgaaacacaaacagcccagcaccacaggacaagagaacagcttagt
gctgctcaacttgagcttaacaacctgaggctgcagatcagtagcggggagagccggctg
gtgtcccacacggtacatacgggcctgcagggcagtgagggggacatggaggctctgcgt
gcccagctgaagcaggctgagaacaaggtagaagagctggccgagcgactgaagaacact
tctgccagtatggagcagtacaaagccatgagccttagcctggaggagtccctagataaa
gagaaacaggtaaccgagcaggtgcgttcatctgtggaaacccagatggaatctgctcag
gagcagtataaacagctggagcagaaacttctagaaatggacaaggagaagcagagcttg
caggaagagaaaagcaaagctgttgctgctgtggaagaagagctgagcgagctgaggaaa
tctctgagcagcctgcaggcagaacaccagagtgccttggagagagcttctgttgctgct
gcacaggagcaacaggccatcctggacagtgagcagcaggctaagatggcagctgaggcg
caggataaatatgagagggagatgttgctgcatgcggccgatgtggaagcattgcaggct
gctaaagctcaggctctgcaggcagctcttctcaaacagcagctggaggagaaagttcag
agcatgagcgcacagctgctggagtctcgtgtctcctgggaagagcaagagaagattctc
aaggaggagcagtgtaagttagagtctcgctgtgaagatctgcagaggcagaacacactc
ctccatgagcagatgcagactctgagtggacagatggccagtcagatgcagcgagcagct
aatgagagtccgctcaacatctctctgactgaggagggcaagtctcaggagcagctcctg
gagatactcaggtttgtgcgacgggagaaggagatcgctgagtctcggtttgaggtggtc
cagggggagagtctgaggcacaggctgagagtggagcatctggagagagagctgaaggat
gttcaggagagtctaagtgcagagagagagaggatgcaggtgactgcaaagactctgtcc
cagcatgatgagctgatgaagaagacagagaccatgaatgtgctaatggagaccaataag
atgctgagggaggagaaagagaaactggagcaggagttgcaggatactcaagccaaggtg
cggaaactggagtcggacatcttgcctatgcaggagtccaatgcagagctcagtgagaag
agtggaatgctacaggcagagaagaagcttctggaagaagacatcaaacgctggaaagct
cgcactcagcacctggtgagccagcagaaggacactgacccagaggagtacaagcgcctg
cactctgagagggaagcacatctcaaacgcatccagcagcttgttgaggagactagccgg
ctcaaagctgaggcttccaggagcagtggcactttgactatgttgcagtctcaggttcag
aacttaagggagaacctggggaaggtgatggtggagagggataacctgaagaaagaccaa
gatgtcaaaaatttggacatccaggagaaaatgaaaaccatcacacaagttaaaaagatt
ggtcgacgatataaaacccagtatgaggaactcaaggttgaatatgacaagtcggtagcc
gctgctgcatctgcaccagcccaggatcaggaggcacagcaggcatcagctcaagaactt
cagagcctaaaagagtctctcaaccaatcagagaacaggacaagagaactggaaggccat
ctggagaatctgaatagaactgtaggcgagcgggaagcagaggcacgtggtgcgcaggag
caggcctctcgccttcagggggagctaacgcgtctcagacaggaacttcaagagaaatca
tctcaggaggagcgactcaaacagcaactgactgaaaaagaggagaggaccaagaaggcc
atagtaatggccaagcagaagatcagccagcttactgttgtgaagaatcagcttcagaaa
gaaaatgaggagttgaagcaacaaaaagaggaattagaagtacgagtgagcgcactaaag
tctcagtacgaggggcgtctgagcagacaagaaagggagctgcgagacctccgtgagcag
caggagagacatggagaacagagagacgaaccagcggaacagggctccagcaagacccag
gaacctcaaaggacaacagaacagcggcagatctctctcaagtccacaccagtggcagaa
agaggaagtgcaagcacttcagagcctccaactgctaacataaagcccacaccactggcg
gcaacccccagcaagcctccagccatcccaggaaacaaatccaccccaagggccagcatc
aaacccatgatcactcctgccccagtgcccactcctacacccactgccacagtcatgccc
accacgcaggtggagagccaagagcccatgcagtcatctgaaggtccacttgagcatgtg
actgtctatggcagtgccagtggttcagtgcggtccaccagccctaatgttcagaccaac
ctggctcaacctctgctgaacgttcaacagcagagccaagccactgcattcatccagccc
actcaacaacaaacacaaccccctgctgaaccatccaatcaggaacctccagctgctgta
atgctcccaacctcacaaatagacaggcctctttccacatccacagggctgtggagtgcc
accactagcacaagcagtgccagtgcagtgaccgcgtctcctagtaatgccttgagcaaa
cgcccccgtgaagaggaacaagagagcatgtctgctgatacacagtcccaggatgagccc
attgacactcccatttgcaagagggtccgcattcatagggtggggctggaggaagagatg
ttggctgaggacagcactgaggctgagagtgttgtaccaggtgacaaccaggaggctcct
gacgctggacaggagttggagagatacactactatggagatgatgatggatgaggaacca
ggaccatctcagtctgtgcctggagatcgacttctgcctcattcctctgacacccatcga
agcccagatgagcccgatcaccatgttatagtcattgttagtgacacagatagtgaggga
gaccacgaagatgaatccgaggaggaggaagaggaggaggaagaagagcaggattatgag
gaggaagatgaggaagaggatgaggaagatgacgatgatgaggaggatggagggattggg
gaagagggagaggagagcaacgaagggagcggcagcagagacggcaatgaggcctacgag
ggagacgacacagaggtccctgatcccacagatccaggcactgagacagaggaaagtctt
ggagcgacagactccacccaacgcatggcagattctcagagctttgaaacgagcacactg
gatgtgtttgatgcacccgtcaccagctctgcccctcgacctccacaatcacccaggaga
cctcagcatcctctgccacctcgactaaacatcttggccccacctgctcaggacttggga
cctcctgctcaagtccagcgtctcccagttcgtcggcagtcagtgggacgaggccttcag
cttacccctggaatggccagtagtgcacagcagcatttctttgaggacgatgacaggatg
gttcccagtacccctacactcattcctccacgctcggatggatttgctgaagcaatccat
tctccacagatcgcaggtgtatcacgattccgattcggtccttcagatgaccttccacag
accagctcctctcactcagaccttggccagctgccctcacaaggtttaggcatgtatgat
agttctgtttaccttggagctcatgaggaggagtcggggggccgaagtgtgcccacaacc
ccactacagatcgctgctcctgtgacaattttatcagagactgtgccatctgaagcaaat
gagcatgcttctcagtctgtacccatggtgagcacctccacaccaggcctcagcgctcct
gcaggccccagtggggtggaggagagagatgacttgttcatggacggaggagacagtgct
gaagcttcacttgaggctgtgtcacagactgaggcagaggaaccagcccagacatcagat
gaggccagtctgccttccacaagccaagaaccttcatctagttctgcagacacgagcagc
tctcagcctcctaaagctagaacggggtctggcagacaatggactagtggtcgtggttct
aggagctttgtaaagaggggtggaccaggtgtcctgggtgtgaggggccgttttgccagg
tga |
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