Ctenopharyngodon idella (grass carp): 127502142
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Entry
127502142 CDS
T08802
Name
(RefSeq) estrogen receptor 2a isoform X1
KO
K08551
estrogen receptor beta
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127502142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127502142
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127502142
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
127502142
Nuclear receptors [BR:
cide03310
]
3. Estrogen like
3A. Estrogen receptor
127502142
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Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127502142
NCBI-ProteinID:
XP_051730703
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Position
20:14810107..14838275
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AA seq
567 aa
AA seq
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MHQQFPVDDATTLNSSAFTMSEYPEGESPLLQLQEVDSSRVGGHVLSPIFNSSSPSLPAE
SHPICIPSPYTDLSHDFTTLPFYSPALLGYGTSPLSDCSSVRQSLSPTLFWPPHSQVSSL
ALHQQQTRLQQNHPTGGTWAELTPYDHGEEEYRKPLVKRVADSEETSTSSRGKADMHYCA
VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCY
EVGMMKCGLRRDRGSYQQRGAQQKRMARFSGRMRTSGPKSQEMKSVPRPLSGNEVVTMAL
SPEQLIARIMDAEPPEIYLMKDVKKPFTEANVMMSLTNLADKELVHMISWAKKIPGFVEL
SLFDQVHLLECCWLEVLMLGLMWRSVNHPGKLIFSPDLSLSRDEGSCVQGFVEIFDMLLA
ATSRFRELKLQREEYVCLKAMILLNSNMCLSSSEGGEELQSRSKLLCLLDSVTDALVWAI
SKTGLSFQQRSTRLAHLLMLLSHIRHLSNKGMDHLHCMKMKKMVPLYDLLLEMLDAHIMH
SSRLSHSSPRESKGVQEAFICTSQHGP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaacagttccctgttgatgatgctacaacactgaactcgtccgccttcaccatg
tccgagtatccagagggagaaagccctctgcttcagctacaggaagtggactccagcagg
gtgggaggtcacgtcctctcacctatctttaactcctcctctccatccctgccagcggag
agccatcccatctgtatcccatcaccctacacagacctcagccatgacttcaccactctg
cccttctacagtcccgctctgctgggttacggcacatcgcctctgtccgactgctcatca
gtgcggcagtcgctaagccctaccctcttttggccacctcatagccaagtttcatcactt
gcattacatcaacaacagactcgattacaacaaaaccatccaactggtgggacttgggcg
gaacttacaccatatgatcacggcgaagaggaatacagaaaaccactggtgaagagggta
gcagattcagaagagacttctacctcttcgagaggcaaagctgacatgcactactgtgcc
gtttgtagtgattatgcctctgggtaccattatggtgtgtggtcgtgtgaaggatgcaaa
gccttcttcaagaggagtatacaaggacacaatgactacatctgccctgccaccaaccag
tgcaccatcgacaagaaccgccgcaaaagctgccaggcctgccgactccggaagtgttat
gaagttggaatgatgaaatgtgggttacggcgagatcgtggcagctaccaacaaagagga
gcacaacagaagcgaatggcacgattctctggcaggatgagaacaagtggcccgaaatct
caagagatgaaaagtgtcccacgtcccctcagtggaaatgaggtggttaccatggcgttg
agccctgagcaactaatcgctcgcatcatggatgcagagccacctgagatttacctcatg
aaagatgtgaagaagccatttactgaggccaacgtcatgatgtcactgaccaacctggct
gacaaagagctcgttcacatgatcagctgggccaagaagatcccaggttttgtggagctc
agtctttttgaccaggtccatttgttagagtgctgctggttagaggtgctgatgttggga
ctaatgtggcgttctgttaatcaccctggaaagctcattttctctccagacctcagtctc
agcagagacgaaggcagctgtgtgcaggggtttgtggaaatctttgatatgctgctggca
gccacgtccagattcagagaactcaaattacagagagaggagtatgtgtgtctcaaagcc
atgatcctcctcaactccaacatgtgtctgagttcgtctgagggaggagaggaactgcag
agccggtcgaagctgctgtgtctgctggactcggtgacggatgctctggtatgggccatc
tcgaagacaggcttgagctttcagcagcgctccaccaggctagcccatctgctcatgctg
ctctcccacataaggcacctcagtaacaaaggcatggaccacctccactgcatgaagatg
aagaagatggttcctctgtatgacctgcttctggagatgctggacgctcatatcatgcac
agctcacgtctgtctcactccagtccacgagagagcaaaggcgtccaggaggccttcatc
tgcacttctcagcatggaccctaa
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