Ctenopharyngodon idella (grass carp): 127502160
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Entry
127502160 CDS
T08802
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127502160
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
127502160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
127502160
NCBI-ProteinID:
XP_051730741
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All DBs
Position
20:14410989..14490903
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AA seq
694 aa
AA seq
DB search
MSRQCKNCGGADIDTDPARGSAVCTACGSVLEDNIIVSEIQFVENSGGVSSAVGQFVSAD
GTSKAPVLGSGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSKH
LTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPAV
DPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHE
FRRTVKEVISVVKVCEATLRKRLTEFEETPTSSLTIDEFMRVDLEQECDPPSFVAGKKKI
KMQQLEQELAKKLEEYQGEINSYRDEIETQLAGSSRTKLRGIYSSYAREDDDCVSLASGV
TGDEDPEDEEMEAAAQHLNQEFFSQVLEQGDQEGMEDQEGSKDTVPLSSQSTHVPLTALL
GPLPSAASLGLTDSIRECIAEETTNMEDKSNNGELDLDGIDEDEIEKYILNEIEVEAKTE
LWMKQNEEYLREQKEKEERIAKEKEQGTYKEKPKKPSKKREPILASTAGEAIEKMLEQKK
ISSKINYDVLWDLNSKGSGSNTTQQAEDVPAGGSGRKKLTRRKKQLNKSNLGLAKPASLM
GKRLRPLISSAPKKKRTAATPVTPNITTMLPLAAPEPPPTPTPPPVLEIGPVAYEEPAEE
EEEIEEEVEESCVSAMELIGGNDYGCEAEEEEVF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcagtgtaagaactgtggtggagcagacatcgacacagacccagcccggggg
agtgcagtctgcacagcctgtggttcggttctggaggataatatcatcgtatctgagatt
cagtttgtggaaaacagcggaggggtgtcttcagcggtcggccagtttgtatctgcagat
ggtacttccaaagctccggtcctgggcagtgggttccacacaagtctgggaaaagaatcg
cgagctcagacgctccagaacgggaaacggcagatacacaacctcggcagccagctgcag
ctgaaccagcactgcctggatacagcctttaatttcttcaagatggtggtgagcaagcac
ttgacacgagggcgaaagatgacacacgtcatagccgcctgcctctacctggtctgcagg
acagagggaacgccacacatgctcctggacctgagtgatcttttacaggttaatgtttac
attctgggaaagaccttcctcctgttggctagagagctctgtatcaacgctccagccgtc
gatccatgtctgtacattccacgattcgcccacatgttggagtttggtgaaaagactcat
gaggtttcgatgactgctctcagactgctgcagaggatgaaaagagactggatgcacaca
gggcggcggccatcaggcttgtgtggtgcagctctgctcgtggcagctcgtatgcatgaa
ttccgtcgtactgtgaaggaggtgatatctgtcgtcaaggtgtgcgaggccacattgaga
aaaaggctgacagagtttgaggagacccccaccagttccctgaccattgatgagttcatg
cgagtggaccttgagcaagaatgtgatcctccatcatttgttgctggaaagaaaaaaatc
aagatgcagcagctggagcaggagttggccaagaaacttgaggaatatcaaggtgagatc
aactcataccgcgatgagattgagacacagctggcagggagcagcagaaccaaactgaga
gggatttattcctcctacgcaagagaagatgatgactgtgtgtccttggcctctggggtg
actggggacgaagatccagaggatgaggaaatggaggcagcagcccaacatctcaaccag
gagttcttcagtcaggtgctagagcagggggaccaggaagggatggaggatcaggagggg
agtaaggatacggtacctctctctagtcagtccacgcatgtgcccctgacagccctcctc
ggccctctgcccagtgcagccagccttggtctaacagactccattagggaatgcatcgca
gaggagactacaaacatggaagataaatcaaataatggggaactagatctagatgggatt
gatgaagatgaaattgaaaagtacattctgaatgagatagaggtcgaggcaaagacagag
ctgtggatgaagcaaaatgaggagtatttgagggaacaaaaagaaaaagaagaaagaata
gctaaagagaaggaacaggggacctataaggagaagccaaagaagccgtccaagaagcga
gaaccgatcctggccagcactgcgggagaggccatagagaagatgctggagcagaaaaag
atctccagtaagatcaattatgatgttttgtgggacctcaacagcaagggcagcgggagc
aacaccacccagcaagctgaagacgtgcccgccggtggctccggacgcaagaagttgacc
cgccgcaagaagcagctaaacaagagcaatcttgggctcgctaaacccgcgagcctcatg
ggcaagaggctccgccctttaatatcatccgctcccaagaagaagaggacagcagccaca
ccggtcactcccaacatcaccacaatgttgcctcttgcagccccagagccccctccaacc
cccacccctccccccgtgttggaaattgggcctgtggcatatgaggaacccgctgaggaa
gaagaggaaattgaggaagaggtggaagagtcttgcgttagcgccatggagctgataggt
ggaaatgattacggatgtgaagctgaagaagaggaggttttttag
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