KEGG   Ctenopharyngodon idella (grass carp): 127502185
Entry
127502185         CDS       T08802                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cide01009]
    127502185
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cide04121]
    127502185
Enzymes [BR:cide01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127502185
Protein phosphatases and associated proteins [BR:cide01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127502185
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127502185
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-RING_11 Prok-RING_4 zf-Nse
Other DBs
NCBI-GeneID: 127502185
NCBI-ProteinID: XP_051730789
LinkDB
Position
20:16225952..16302898
AA seq 889 aa
MNDYTEKDCASVKMDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGEL
RCPECRTLVESGVDELPSNILLVRLLDGIKQRPRRTGSMHGTCTNGSAAAVVRAQGAGGG
QRDPGPTGAQSQRVQAKSTPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDE
NWYHGEMGGVHGFFPTNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTV
IRRVDENWAEGMLGDKIGIFPISYVEFNTAARQLIELDKPSESGGDSSEGPSSSSSGPQA
NGSQKATGEKKNSKKRHSFTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGE
LSGGLSSSAPSQVHICTTGLIVTPPPSSPVTTATVFTFPPETSYASIPVDALPPPPPPPP
QSQSSAVGAAALNAGQRPSPAASDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLE
RCQDGWFKGTSMHTGKIGVFPGNYMSPVNRTVSGSSQPKVPLTLCSQAGRGVTIVSPSSA
PLGAALGSVDPSKPLPVCPNPTPSCTLPAAVVTAAHIPTGQHPKVLMHVTSQMTVNQARS
AVRTAVSHSQDRPTAAVTPIQSHNPVAYLPSTAVVLQASPVLGSSPGSSSARVGVAMGCA
AASLTPPNVSAASLDGDVVRPVSVVALPMNPGSTKSLGAASNQGVACRLDKDCKREKKGL
LKLLSNKKKLRPSPPSSPTLEAEQSISMEMPQGAVGPEMAPPSSASVAVGHNGRAVACPM
DSELSVSSSSSNTDAASHRSSSQDNTAPIAPPPRQPCSSLLSMQHDGRPIVCERYRVVVS
YPPQSEAELELKEGDIVFVHRKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgaacgactacactgagaaagattgtgcgagtgtgaaaatggatgagtctgcgctcctg
gacctgttggagtgtccggtctgcctggagcggctggatgccacggcaaaggtgttgccg
tgccagcacacgttttgtcgccgctgcctgcttggaattgtggggtcacgcggagaactg
cgctgtccggagtgccgcacgctagtggagagtggcgtggatgagttgcctagcaacatc
ctcctggtacggctacttgatggcatcaagcagaggccaaggaggacgggaagcatgcat
ggcacgtgtactaatggatcggcagcggcggtggtcagagcacagggtgccggaggaggc
cagagggatccaggtcccacgggggcacagtctcagagggtccaggccaagagcactcca
gttaggggagttcctcagctaccctgtgccaaggccttatacaactatgacggcaaagaa
cccggagatctcaagttcagcaagggtgacatcatcatcctgcgccggcaggtggatgaa
aactggtaccatggagagatgggtggagtccatggattcttccctaccaactttgtccag
gtcatcaaacctctcccacagccaccccctcaatgcaaggccctgtatgactttgagctg
aaagacaaggaggctgacaaggactgcttgccattctcaaaggatgatattttaactgtg
attcgtcgtgtggatgagaattgggcggaaggcatgctgggagataagattggcatcttc
cccatatcttatgtagagtttaacactgcagctcgacagctcatagaactggacaagcca
tctgaaagtgggggagattccagtgaagggccatcgtcctcatcctcgggcccccaggcc
aacggctcccagaaagctactggggagaagaagaacagtaagaagcgacactccttcacc
tccctaactatgtcccataagccttgcctggcccctccaccccagagacactccatggag
atcagtggcccggttctgatcagctcctccaaccccacagctgctgcccggatcggagag
ctcagcggaggcctgtcctccagcgcaccttcacaggttcacatttgcacaacaggactc
attgttactcctccacctagcagtcctgtcaccacggcgacagttttcacatttccccca
gaaaccagctatgcttctattccagtggatgctcttcctcctccacctcctcctccacct
cagtcccagtcctcagctgtgggcgctgccgccttgaatgctggtcaaaggccgtcacct
gctgcgagtgaccagagtggccgtcagagacctacagtgtatgtggcgatgtttccctac
acgccccgtaaggaagatgagttggaattgaggaagggagagatgtttctggtgctggag
cgttgtcaggacggctggtttaaaggaacatccatgcacactggcaagattggagtgttc
cctggtaactacatgagtcctgtcaacaggactgtttctggcagcagtcagccaaaagtt
cccctgaccctgtgctcccaggctggacgtggcgtcaccattgttagcccctcctctgct
cctcttggagctgccctggggagtgtcgaccccagcaaaccccttccagtctgcccaaat
cccaccccatcttgcacgctgcctgctgctgtagtaacagctgcacatatacccactggt
cagcaccccaaagtgctcatgcatgtgacatcacagatgactgttaaccaggcacgcagt
gcggtcaggacagctgtgagtcacagtcaggaccgacctacggcagctgtgacgcccatc
caatcccacaatcctgtggcctaccttcctagcacagctgtggttcttcaggcctcacct
gtcctcggctccagcccaggatcctcctccgccagagtcggtgtggctatgggatgtgcg
gccgcctccttgaccccccctaatgttagcgctgcttctttggacggtgatgtcgtgaga
cctgtgtctgtggtagcacttcctatgaaccctggcagcacaaaatctctgggtgcagcc
tcgaaccaaggtgttgcttgtagattggataaagactgcaagagagagaagaaaggcctg
ctgaaactgctgtctaataaaaagaagctccgcccatctcccccatcctcccctacactg
gaagcggagcaatctatttccatggagatgccccagggggccgttggacctgaaatggct
ccgcccagctcagcatcagtggcggtaggacacaacggtcgtgctgtggcctgtcccatg
gattctgagctctctgtgtcctcatcttcatcaaacacagatgcagcgtcacacaggagc
agctcccaggacaacaccgccccgatcgccccgcctccacgtcagccatgctcctccctc
ctctcaatgcagcacgacggacgaccaatcgtgtgcgaaaggtaccgtgtggtggtgtct
taccctccccaaagcgaagcagagctggaactcaaggagggagatattgtatttgtacac
agaaaacgagaggacggctggtttaaaggaacactacagagaaacggtcgaaccggcctg
tttcctggcagctttgttgacagtatctaa

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