Ctenopharyngodon idella (grass carp): 127502335
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Entry
127502335 CDS
T08802
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127502335
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127502335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
WDR90_beta-prop_4th
MIOS_WD40
TAF1C_beta-prop
VPS11_N
DUF2844
Motif
Other DBs
NCBI-GeneID:
127502335
NCBI-ProteinID:
XP_051731185
LinkDB
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Position
20:complement(8594464..8603792)
Genome browser
AA seq
656 aa
AA seq
DB search
MTLFHHVVDRGVIKRRCNGQRRDYPLSSLLDGYQCGRQDEHISYGASAAAVPPFGCTFSS
APGQQNSLAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWVPGTNSLVTASGDQT
ARLWDVITGDLLGTFKGHQCSLKSVAFSKQERAVFSTGGRDGNIMIWDTRCIKKDGFYRQ
VKQISGAHMKPERYTPQTKKRRGMAPPVDSQQGVTVVLFCDENKLISSGAVDGIIKMWDL
RKNYTAYYHNPLPLQTYPYPGSCTRKLGYSGLSLDSTGSRLFSNCTDDNIYMFDISGLKT
TPVAVFSGHSNSSFYVKSSVSPDDQFLASGSSDHHAYIWKISDPKQAPMMLQGHSQEVTS
VAWCPTDFTKIASCSDDNTVRIWRLNRRPDRENTSNRDTNIVGWTLRKVQSPTRTPGPYS
PVELTPAKSPGSERVVSLASPQPAACAPTGADLPLPSNTSAPSAKLSSPKILSSIQQWFS
RSSSPGHHGTSPLRKVLTPVLQGPSSERRAKRRLDTGDCARSGLEEERDGVSELYPNVKR
SRSSVSAENCSEENGDLLSLQTDERLCSTHQVGTGKENSSPRRTDWLSVMSQRFKGSTQP
QSPNGSSKRQDARTHSAPAVISPRPMRVVSSPPTKKASPSRPMKKISSYFMKRTQD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgactctttttcaccatgttgttgatcgaggagttataaaaagaaggtgcaatggtcag
cgtcgggactatccgctgtcctctctgctggacggatatcagtgcggtcgacaggatgaa
cacatttcatatggagcctcagctgctgctgtgccgccgtttggatgcacattttcctct
gcccctggccaacagaacagtcttgctgttgcaaatgaagaagggtttgtgaccatcttc
aatactggagaaaaacagagctctgtcctgaaagagtggcaggcacatgataatgctgtt
tttgatattgcctgggttcctggtacaaacagcttggtaacagcgtctggtgaccaaacc
gcccgtttgtgggatgttattactggtgacctgctgggaacttttaaaggacatcagtgc
agtcttaaatcagtggctttttccaagcaagaaagagctgtgtttagcactggaggcaga
gatgggaacataatgatttgggatacacgatgcattaaaaaagatggtttctacaggcaa
gtaaaacagatcagtggtgcccatatgaaacctgaaagatatacacctcaaacaaagaag
agacgtgggatggcgccccctgtggactcccagcagggtgtgacagtggttttgttttgc
gacgagaacaagctcatctcctcgggagcagtagacgggatcattaaaatgtgggatttg
cggaagaactacactgcgtactaccacaaccccctccctctacagacctatccttaccca
ggctcctgcacacgcaagctaggttattctggtctgtcactggactctactggctccaga
ctgttctccaactgcacagatgacaatatctacatgtttgatatcagtggtttgaaaacc
actccagttgctgtattcagtggccacagtaactcctcattttatgtgaagtccagtgtc
agcccagatgaccagttcctggccagtggctcgagcgaccatcatgcttacatatggaag
atttccgacccaaaacaagctcccatgatgcttcagggccatagccaggaagtcacatca
gtggcctggtgccccactgatttcaccaagatcgcttcctgctctgatgacaacactgtt
aggatttggcgcctgaaccgcagaccagatagagaaaacacatccaaccgagatacaaat
atcgtaggctggacacttcgtaaagtccagtcaccaaccagaacacctggcccttacagc
cctgttgagctcactccagccaaaagtcctggctcagagagggtcgtctctctggcttca
ccccagcctgctgcttgtgcccctacgggtgctgatttacccctcccatcaaacacctct
gcaccttcagccaagctcagcagccccaaaatcctctcatctatccagcaatggttcagc
cgcagcagttccccgggtcaccatggtacatctcctcttcgtaaggtgctcacacctgtc
ctccagggcccttcctcggaacgtcgcgcaaagcgacgactggacacaggtgattgtgct
agatctggtttggaagaggagagggatggggtgtctgaattgtatcccaacgtaaagagg
agcaggagttcggtgagcgcagagaactgttctgaggagaatggtgacctactcagtttg
caaacagatgagaggctctgctcaactcatcaagttggcactggcaaagagaacagctct
ccaagaaggactgattggctgtctgtgatgagccagagatttaaaggatcgactcaaccc
caaagcccgaacggcagcagcaaacggcaggatgcaagaacacacagcgctccagcagta
atctcaccacgtcccatgagagttgtctcgtcaccaccaaccaagaaagcatcaccctcc
agacctatgaaaaaaatctctagctactttatgaaaagaacccaagactga
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