Ctenopharyngodon idella (grass carp): 127502346
Help
Entry
127502346 CDS
T08802
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127502346
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
127502346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DALR_1
TMEM70
Motif
Other DBs
NCBI-GeneID:
127502346
NCBI-ProteinID:
XP_051731211
LinkDB
All DBs
Position
2:14391057..14425169
Genome browser
AA seq
897 aa
AA seq
DB search
MRHRHAGAVHQQHTNDADARDSQKEGSRPVAPLFSLPPPPPSIKERSTSSHHSRHVQSCP
DRGTRNGECLPLTGSCSLAQGAHSDRQSYDNQPHPFPGASSGYQCHSEGLSQSSHSPQHT
SSVSPQPSPSDLLPPPLPSHISYTRDTRQKSANYKQEIVQRGVGEGGRRDQNQLLQQPCY
NQQRDPSFELLLPNSGQGQINAREEAEKERQLIAPQAQLLLGSSLPVNYCISRSGQVCTD
QQALLLQHQHQQARAQEHSLQRQQSDQDGRYQEGEIALCQPYQCERALERNSSVSSSENS
SPPYGSSSQLWPEPHDKEERKNRAGKYKAHAERTKLSHAGSKPSLSESSHSLPQIAMNSC
KYNGGVVRPLGSLAASRRNLAEHDSETQPLQTLHSSGLEVVVSKGGGEDPSKASNESLVR
ESGNAPQKKNKDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKES
SYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVC
AIHPIPGQYVFTWTARLAFTYVPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDAS
SRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSN
FLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEK
HVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQK
LRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDAVTGSL
QALPCLISQAITQQQQDLLDGFVHRFRPASLGSERSWTPSRRRRSPSTAPHTSSDSG
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggcacgcgggagctgtccaccagcagcacaccaacgacgcggacgctcgt
gacagtcagaaggaaggatctcgtccagtcgccccgctctttagtctgccgcccccaccg
ccatcgataaaggagcgatccacctcctcacatcacagccgacatgtacagtcttgtccg
gaccgcggcaccaggaacggcgagtgcctgcctttgaccggcagctgcagcctcgcacag
ggagcgcacagtgaccgtcagtcttacgacaaccagccgcatccgtttccaggggcctca
tctggctatcagtgtcattctgaggggctctcgcagagcagccattctcctcagcacaca
tcttccgtttccccgcagccctccccatctgatctgctgccgccgcctctgccttcgcac
atttcttatacgcgggatacgcgccaaaagagtgctaattacaaacaagaaattgtacag
cgtggcgtcggggagggggggcgtcgagaccaaaaccagttgctgcagcaaccttgttat
aatcaacaaagggacccctcctttgagctactcttgccaaactctggtcaaggacagata
aatgcacgcgaggaagccgagaaggagaggcaattaattgcgcctcaggctcagttactg
ttgggcagcagcttacccgtcaactactgcatcagcagatcggggcaagtgtgcacagac
cagcaggcgctgctgttgcagcatcagcatcagcaggctcgcgcgcaggaacacagcctt
cagcggcagcagagtgaccaggacggcaggtaccaggagggggaaatcgcactctgtcag
ccgtatcaatgcgagcgcgcgctagagagaaactcttcggtgtctagtagtgaaaacagc
agccccccgtacggctccagcagtcaactgtggccagagcctcacgacaaggaggaaagg
aaaaatcgagcaggcaaatacaaggcacatgctgagcgaacaaagctgagccatgctgga
tccaagccctccctctctgagagcagtcactcactccctcagatagccatgaacagctgc
aagtacaatggaggagtggtaagaccactgggcagcctggcggcgtcacgacgcaaccta
gcagagcatgactctgagacccagcctctccagactcttcacagctccggcctggaagtg
gtcgtctctaagggaggtggcgaggaccccagcaaggcgtccaatgagagcctggtccga
gagagtggcaacgcaccacagaaaaaaaataaagatattggctacaagttgggccacagg
agggcactttttgagaagcgcaagcggcttagtgactatgccctgatattcggtatgttt
gggatcgttgtcatggtaacagagactgaactgtcctggggggtttacactaaggaatct
tcatattcatttgcactgaaatgccttatcagcctttccactgttattttgcttggtctt
ataataatgtaccacgctcgggaaatacagctgttcatggtggacaatggggcggatgac
tggaggatagccatgacatatgaacgcatcttctttattgtcctggagctgctggtgtgt
gccattcacccgataccaggccagtatgtgttcacgtggacggcccggctggctttcacc
tacgtgccctccgtggccgacgctgacgtagacatcattctttccatcccgatgttcctc
cgcctctacctgattggccgggtcatgctccttcatagcaagctcttcaccgacgcatcc
tcgcgcagtataggtgccctcaacaagatcaacttcaacacacgcttcgtcatgaagacc
ctcatgaccatctgcccgggcaccgtgctgctggtcttcagcatctcctcctggatcatc
gcagcctggaccgttagagtctgtgagaggtatcatgacaaacaggaagtcactagtaac
tttcttggagctatgtggctaatttccataactttcctatcgattggctatggagatatg
gtccctcatacatactgtgggaaaggggtctgtcttctcacaggaatcatgggagctggt
tgcactgcacttgtagtcgcggtggtagccagaaagttagaattgacaaaagctgagaaa
cacgtccacaatttcatgatggacacccaactttgtaaacgagtaaagaacacagctgcc
aatgtactcagggaaacatggctcatctacaaacacacaaaattagtgaagaagatagat
catgccaaagtgcgcaaacatcagcgcaagttcttgcaggccattcaccaagctcagaag
ctccgcagtgtgaaaatggagcagaggaaactcaatgaccaggccaacactctggtggac
ttggcgaagacacagaatgtgatgtacgacctggtgtcagagctgcaggaacgcagcgag
gagctggacaagcgtattggcacgctggaggacaaactggacgcagtcaccggcagcctg
caggctctgccctgtctgatctcccaagccataactcagcagcaacaggacctcctggat
ggcttcgtgcaccgcttccgccccgcttcgctgggctctgaacgctcctggaccccctcc
agacggcggcgctccccttccactgccccgcacacttcctccgacagcggctaa
DBGET
integrated database retrieval system
