Ctenopharyngodon idella (grass carp): 127502375
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Entry
127502375 CDS
T08802
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
cide04144
Endocytosis
cide04510
Focal adhesion
cide04540
Gap junction
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127502375
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cide01001
]
127502375
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cide04090
]
127502375
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127502375
Protein kinases [BR:
cide01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
127502375
CD molecules [BR:
cide04090
]
Proteins
127502375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Kinase-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
127502375
NCBI-ProteinID:
XP_051731245
LinkDB
All DBs
Position
20:complement(15355104..15383451)
Genome browser
AA seq
1450 aa
AA seq
DB search
MGFLETHLVLGIVLLGVFSDVSKPWPVINSDEKEFILTPHSEFIITCSGVSRVRWVEPLP
LNSEVHSGFNHSTLVITDVVALNTRSYFCECVDQPENYTEIYIFVPDPEVPFVSEPIVET
DELGITIPCLATNPNSQVILRDLQRGDEVSLFYDHKIGFFGMLLPGQYVCETNVNGKAVQ
SSVYNVTKEEGFSIQLRASMEDVKEGDAVNLTCETPPGKAFRQQWLHPQKQAREAVPIKL
SFPDKDQYILKIPKASVADTGRYECAVTNQITGQTKSISLGITVHESSFVEVISNGIGPV
EVASLLEEKEFTIYIDADPEPKVMWFKDGIQLDDRYISTETTHLNGLRYENILVLRHPIE
EDSGIYEVVASTGSRTSKFSFKLLVEAMNPVLPQSVLAPVMWPQRESMEVSLHSTFRLTC
RGQAELAWHSPVYLHDQTNSEKKGLFISTVTIGNATAAHTGEYICYYEFSNNTEETIIYI
YVPDPQTPFVPSMAPFENHVLTSHDEMEIPCRVTDPSTSVSLIHIETSQVLPNVYDSKRG
FVGLFGAGTYVCRALIKGQEHDSIQYIVHGWTGGPDLRVELRAEKKALLVGETITVDCVA
RGSEMLEDHWKYPGKLTDRGVKTVKENKRDLEIHYTLTVSNASPKDSGVYVCSITDIMSN
ESQTKQLTITVYDHEFVHLNPVIGLVETARLDEVREFRVDIESFPAPRVTWLKDGSILGD
VAAEISSSLLKISETSYQGVLTLIRAKAEDSGNYTIRAEIGNLTTSYNFYLQVKVPPVIV
DLMDIHHGSAAGQEVVCTVGGSPAPDVDWYICKNIKHCANDSSQWIPLPINSTDITVELQ
MNVDNYIESHIIFHHLESTIAVRCLARNDIGAISREVKLVSNGPHSELTVAAAVLVLLVI
VVISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRWEFSRDSLVLGR
VLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI
VNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEKGKKDLDIFGINPADESS
RSYVILSFEGKGDYMDMKQADTMQYVPMLEMSEASKYSPIQRSDYDHPPSHRQLNADSEV
ENLLSDDTNEGLTTVDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLSQGKIVKICDFG
LARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPG
MVVDSSFYNKIKSGYRMAKPEHASSDVYELMMKCWNSEPEKRPSFHCLSDTVASLLPSGY
KRCYERVNHDFLKSDHPAVTRVQCIDNDDDAYMGVLYKNQGKLKDRESGFDEQRLSSDSG
YIIPLPDLDPLSNEDYSKRNRHSSQTSEESAIETGSSSSMTKREGETLEDITLLDEMCLD
SGDLVEDSFL
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctggagacacatctcgttttggggattgtcttactaggggtattttcagat
gtttcaaaaccttggccggttattaattcagacgaaaaggaatttattctgacacctcat
tcagagttcatcatcacttgctccggagtaagcagagtgagatgggtggagccattacca
ctcaacagtgaagtgcactccggttttaatcacagtactttggtgatcactgatgttgta
gccttaaacacacgttcctacttctgcgaatgtgtggatcaacctgaaaactacactgaa
atctacatttttgttccagatcctgaggttccattcgtgtctgaacctattgttgagaca
gatgagctgggcataactatcccctgcctcgctacaaacccaaattctcaagtgattctc
agagacctgcagagaggggatgaggtttctctgttttacgaccacaaaatcggctttttc
ggcatgttactaccaggtcaatacgtttgcgagacgaacgtgaatggcaaagcagttcag
agcagcgtttataatgtgacaaaagaagagggcttcagcatacaactaagagccagtatg
gaggatgtgaaagagggggacgctgtcaatctcacctgcgagacccctcctgggaaggct
ttccgccagcagtggctgcatccccaaaaacaggccagagaggctgttccaataaagtta
tctttcccagacaaggatcagtacatcctcaaaatcccaaaagcctctgtggcagacact
ggacgctatgagtgtgctgtaaccaaccaaatcactggacaaaccaagtccatcagcctg
gggatcacagtccatgagagctcttttgtggaagtaatatctaatggtattgggccagtg
gaggttgcatctcttctggaggaaaaagagttcaccatttacattgatgctgaccctgag
ccaaaggtcatgtggtttaaagatggcattcagctggatgaccgctacatctccaccgaa
accactcatctgaatggcctcaggtatgagaatattctggtcctccgccaccccatagag
gaggacagtggcatctatgaggttgttgcgtcgactggctccaggacttcaaaattttca
ttcaaactgctggttgaagccatgaacccagtgctgccacagtcagttctggctccagtg
atgtggccccagagagagagcatggaggtgtctctccactcaactttccgactcacatgt
cgaggtcaggccgagctcgcttggcacagccctgtttatcttcatgatcagactaactct
gaaaagaaaggactcttcatctccactgtgactattggcaatgcgacagcagctcataca
ggagaatacatctgctactatgagttcagcaacaacactgaggagaccatcatctacatt
tatgtgccagatccacaaacgccgtttgtaccatccatggctccttttgaaaaccatgtg
ctgacgagtcatgatgaaatggagattccgtgccgtgtgacagaccccagcaccagcgtc
tctctgattcacattgagaccagtcaggttctgcccaatgtctatgacagcaagagaggt
ttcgttggcctcttcggcgctgggacatatgtctgcagggccctcattaaaggacaggag
catgacagcatacagtacatcgttcacggctggacaggagggcctgatttgagagtcgag
ctacgagcagagaagaaggctctgctggtgggtgagaccatcactgttgactgtgtggcc
agaggcagtgagatgttggaggaccactggaaataccctgggaaactgacggatcgagga
gtaaagaccgtaaaggagaataagcgagatcttgagatccattatactctgacagtgtct
aatgcctcaccgaaagacagcggcgtctacgtctgctccatcactgacattatgagcaac
gagagccaaaccaaacaactcactattacagtctatgatcatgagtttgtgcacctaaat
ccagtgattggtctggtggagactgctaggctggatgaggtgcgagagttcagggtggac
atagagtccttccctgcccccagagtcacatggttaaaggatggctccatcctgggagac
gttgctgcagagatcagctccagcctcctgaaaatcagcgagaccagttaccagggtgtg
ttgaccctgatcagggctaaagcggaggacagtgggaactataccatcagggcagaaata
ggcaacctgactaccagctacaatttctaccttcaggttaaagttccccctgtgattgtg
gacctgatggacatccaccatggctctgctgcaggtcaggaagtggtgtgtactgttggc
ggctcccccgcccctgacgtggactggtatatctgcaaaaacattaaacactgtgccaat
gattcctcccagtggattccacttccgatcaactctacggacatcactgtggaattgcaa
atgaatgtggacaactacattgagagtcacatcattttccaccatcttgagagcacgatt
gctgtgcgctgtctggccaggaatgacattggtgccatttcacgggaggttaaacttgtg
tcaaatggtccgcactcggagctcactgtggctgctgctgttctggtgctgctggtcatt
gtcgtcatctcactcattgtgctggtcattatctggaaacagaaaccacgctacgagatc
agatggcgtgtgattgaatcggtcagtccggacggtcatgaatacatatatgtcgatccc
atgcagcttccatatgactcccgctgggagttctctcgggatagccttgttctgggccgt
gtcctgggctcaggagcgtttgggaaagtggtggagggcactgcttatggacttagtcgt
tctcaacctgtgatgaaagtggcagtaaaaatgcttaaaccgacagcacgctccagtgag
aaacaggctttgatgtcagagctgaaaattatgacccacctgggccctcacctaaacatc
gtcaatcttctgggagcgtgcactaaatcaggaccaatctacattatcacagagtattgt
ttctatggagacctggtaaattacctgcataagaacagagatggttttctcagccgccac
acagaaaagggcaagaaagatctagacatctttggcatcaacccagccgatgagagtagc
aggagctacgtcatcctgtcttttgaggggaaaggtgattatatggacatgaagcaggca
gacaccatgcaatacgtccccatgctggaaatgagtgaagcttcaaaatactctcccatc
cagagatcagactacgaccatcctccctctcacagacagttaaatgcagacagtgaagtt
gagaaccttctctcagatgacaccaatgaaggcctgacgacagtggacctcctcagtttc
acctatcaggtggctcgagggatggagtttttggcctctaagaactgtgtacacagagac
ttggctgcacgtaatgtcctgctgtctcaaggcaagatagtgaagatctgtgactttggg
ctggccagagacatcatgcacgataacaactacgtctccaaaggaagtaccttccttcca
gtgaagtggatggccccagagagtatttttgataacctctacactacactcagtgacgtc
tggtcttatggcatcttattatgggagatattctctcttggagggacgccttatccaggt
atggttgtggattccagcttctacaacaagatcaagagtggataccggatggcgaaaccc
gagcatgcttccagtgatgtctatgagcttatgatgaagtgttggaacagtgaaccagag
aagagaccgtctttccactgcctgagtgatacggtggcctctctgctgccctcaggatat
aagaggtgttatgaacgcgtgaatcatgacttcctgaagagcgatcaccccgctgtgact
cgggtgcagtgtattgacaacgatgatgatgcgtacatgggcgtgctctacaagaaccag
ggcaaactgaaggaccgcgagagcggctttgatgaacaaagactcagctctgatagcggt
tacatcattcctctgccagacctcgacccactgtcaaatgaagactacagcaagaggaac
cgccacagctctcagacgtcagaggaaagcgcaatagagacaggctctagcagctccatg
accaagcgtgaaggagagaccctggaggacatcaccttgctggacgagatgtgcttggac
tcaggagacctggtggaggacagtttcctgtaa
DBGET
integrated database retrieval system
