Ctenopharyngodon idella (grass carp): 127502503
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Entry
127502503 CDS
T08802
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2 isoform X1
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127502503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127502503
Ion channels [BR:
cide04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127502503
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
127502503
NCBI-ProteinID:
XP_051731424
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Position
20:13699002..13712878
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AA seq
550 aa
AA seq
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MMERFENQFLRITLLCTILCESISCCEKIDSHAEDELFKKLFDGYNKWSRPVPNTSDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHTGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLERIENTVDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLP
LFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVI
PLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLDLIPRWLFMRRPAP
DSRRRQKLLLLQRQGQGMTSRVLGPANTSLSTSTSWFRGENSGEESRRRFCYKDLELGTL
SSAISLSLQTASPCPLGSTPPPLQKFSPSPRLEMGTASRQPCGRANVTKRPDNLIPDKPG
FPLSPSVLQALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGL
FLPPWLAGMI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcgctttgagaatcagttcctgcggattactcttctctgcactatcctatgt
gagtcaatttcttgttgtgagaagattgactcacacgctgaagatgaactcttcaaaaag
ctctttgacggctacaacaagtggtcaaggcctgtaccaaacacctctgatgttgtcatc
gtcaagttcggtttatctatcgcccagctgattgatgtggacgagaagaatcagatgatg
acaacaaatgtctggctaaagcaggagtggaatgactataaactacgctggaagccttca
gactacgacaatgtgacttctatcagggttccgtctgaacttatctgggtcccggatata
gtcttgtacaacaatgcagatggggagtttgcggtgacccacatgaccaaagcccacctc
ttccacacaggtaaagtgcgctgggttccacctgccatctacaagagctcatgcagcatc
gatgtcaccttcttcccctttgaccagcagaactgcaagatgaaattcggctcgtggact
tatgacaaagccaagatcgacctggagcgcatcgagaacacggtggacttgaaagattac
tgggagagtggtgagtgggccatcatcaatgctgttggcacctacaacaccaagaagtac
gactgctgccatgagatctacccagacatcacctactttttcatcattcgccgtcttccg
ctcttctacaccatcaacctcatcatcccctgcctgctcatctcctgcctaaccgtgctg
gttttctacctcccgtcagactgcggtgagaagatcacattgtgtatctcagtcctcctc
tccctcactgtcttcctgctgcttatcacagaaatcatcccgtccacctcgctcgtgatc
ccgctcattggcgaatatctgctcttcactatgatcttcgtcaccctgtccattgttatc
acggtctttgtgcttaacgtccatcaccgatcgcccagcactcataagatgccccgctgg
gttcactcagtcttcttggatttgatcccacggtggctgtttatgcgcagacctgcaccg
gacagccgtcgcaggcagaaactcctcctcctgcagcggcagggccaaggaatgacgtca
cgggtgcttggaccggcaaacacaagcctcagtacctctactagctggttcagaggggag
aactctggggaggagtcccgcaggcgcttctgttataaggacttagaactggggacactg
tcctctgcgatctccctttcactccaaactgcttcgccctgccctcttggctcaactcca
cctcctctacagaaattcagtccctcccctagactggagatgggcacagcttccaggcag
ccctgtggaagagctaatgtcacaaagaggcctgacaacctaataccagacaagccaggg
tttccgctctcccccagtgtcctgcaagctctggagggggttcactatatagcagaccac
ctgagagcagaagatgctgactttagtgtaaaagaggactggaagtatgttgctatggta
atagacagaatcttcctatggatgttcatcatagtatgtttgctgggaacaatcgggctc
tttctcccaccctggctcgcaggcatgatctag
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