KEGG   Ctenopharyngodon idella (grass carp): 127502564
Entry
127502564         CDS       T08802                                 
Name
(RefSeq) claudin-20
  KO
K06087  claudin
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03272  Virion - Hepatitis viruses
cide04382  Cornified envelope formation
cide04514  Cell adhesion molecule (CAM) interaction
cide04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    127502564
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    127502564
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127502564
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    127502564
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cide03037]
    127502564
   04147 Exosome [BR:cide04147]
    127502564
Cilium and associated proteins [BR:cide03037]
 Other cilia and associated proteins
  Stereociliary proteins
   127502564
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   127502564
  Exosomal proteins of colorectal cancer cells
   127502564
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM_230_134
Other DBs
NCBI-GeneID: 127502564
NCBI-ProteinID: XP_051731509
LinkDB
Position
20:9347351..9362081
AA seq 292 aa
MMPSSTMQMFAFILALLGVLSATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYST
GVFSCSLKYSVLALPAYLQTARTTMVLSCMMATMGLCLAALGLKCTRWGGSYRSKGHTAI
SAGACFIIAGVLCLVPASWFTNEVITTFMDSKVPKSSKYEPGAAVYVAFVSAGFLLAAGV
IFCLSCPGRRGGPLDSGSSHPDKPKKQKLRQEQPTRDEQKQQHCEQQSQTEPPEREQSHR
EKLHQEKLQADDRQQEKSVPDRMILEKDKQYQSPSRTRIQDPKAVYSLHDYV
NT seq 879 nt   +upstreamnt  +downstreamnt
atgatgccgtcttccactatgcagatgtttgcgttcattctggcattactgggggtcctg
agtgccacggttgccacactgctacccaactggaaggtgagtgcagatgtgggctccaat
atcatgactgccatctcgcagatgcagggactgtggatggactgcacctggtacagcacc
ggagtcttcagctgctcgcttaagtactcggtgctggcattgccggcttatcttcagacc
gcacgcaccactatggtgctttcctgcatgatggcgacaatgggactctgcctggccgcc
ctagggctgaaatgtactcgctggggtggcagttatcgctctaagggacacacggccatt
tccgcaggggcttgcttcatcatagcaggggtcctgtgtctggtgcccgcatcctggttc
accaatgaggtcatcactacgtttatggactccaaagtgcccaagagcagcaagtacgag
ccaggcgcagcggtgtacgtggcatttgtgtcggcaggattccttttagctgcgggtgta
atcttttgcttatcatgtcctggaaggagaggcggtccattagattcgggctcgtcccac
cccgacaagccaaaaaagcagaagctgcgccaggagcagccgacccgcgacgaacagaaa
cagcagcactgcgaacagcagagtcagactgaaccaccggaacgagagcagtcgcatcga
gagaaactacaccaggaaaagctacaagcggatgatcgtcagcaagagaagtcggtgccg
gacaggatgatactggagaaggacaagcagtaccaatctccatctcgaacccgaattcaa
gatcctaaggccgtctatagtctgcacgactatgtgtaa

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