Ctenopharyngodon idella (grass carp): 127502622
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Entry
127502622 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127502622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127502622
Transporters [BR:
cide02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127502622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_15
AAA_23
KIF1B
Motif
Other DBs
NCBI-GeneID:
127502622
NCBI-ProteinID:
XP_051731623
LinkDB
All DBs
Position
2:16845427..16900480
Genome browser
AA seq
2330 aa
AA seq
DB search
MNTSSQIRLLLWKNWTLRKRQKIRFLVEILWPVVLFIGLVWLRRANPLYRQHECHFPSKA
MPSTGILPWIQGIFCNANNPCFRHQTRGESPGVVSNYHNSILARFYMDSQELMFNDTEFH
QLGRLWREVTVMSNFMETLRTNPELVAGKGLKVEDILKDDETLTSFLLRDVGLSEAVVHD
LTNALVRVEQFAYGVPDLTLKEIACSQTLLDRFLIFPNRGLYWVHNAMCALSQQRLQKIE
DVLYANIDFFKLFRLLPVVLDNHTTGMDLQFWGRVLSAVSDKLQELVGRPSSQDLMRVMY
SIFQPGGPSSFSQLMSTVSDLFCGYPXGEGTRVFSFNWYEDNNYKAFLGINSSREHESYT
YDKTATPFCNALMQNLESNPITKIVWNSVKPLVMGKILYTPDSPAVRKILKSANTTFEEL
ERLKKMAKVWEEVGPQLWEFFQNSVQMNMIRDTLRNPTVMDFLDRHLKETEFTTKDILNF
LHNGPEEERYMNMTNFDWRNVFSLADQAIRMFNQYSECISLDKFVGHMDENLMTHQALHL
LEENKFWAGLVFIDMYPWTTELPRHVKFKIRMDIDAVERTNKIKDRYWDPGPRADPLEDL
RYIWGGFAYLQDMIEHGILKLHTGHDWPLGVYVQQMPYPCYVDDMFMLTLNRCFPIFMVL
AWIYSVSMVVKSIVLEKEMRLKDTLKAMGVSNGVIWYTWFIDSFLIMAVSTALLTAIIMV
GKVLNYSDPIILFLFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHIFCFA
WQDRITKNMKLAVSFLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDEYSFFTSIR
MMLLDAVLYAVLAWYLDNVFPGQYGIGRPFYFPLQPSYWVKLTPSPSQNPDPGPEKPLVN
NLEKQEDVEHGGLSPEHRECNGSRSSKNCKHKEKRERMEKEREREEQLKTHEEIQQEEIH
PVHNGNPFFEPEPEGLLIGVSVQDLVKVYSRNSRPAVDCLSMNFYEDQITSFLGHNGAGK
TTTLSILTGLFPPTSGTAYVYGRDIRTEMDAIRQSLGMCPQYNILFNHLTVEEHILFYSL
MKGRERKEAEQEVEDMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPT
SGVDPYSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGKLHCSGSPLFLKN
CFGVGFYLTLVRRIKDQRKKENECDCASECSCTCSTCTRYKEESQALQPERTLDGNVESI
TTLIHHHVPEAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLADMGLSSFGISDTS
LEEIFLKVTADGEAANSSVTPEQWMLQQRKNGNGFLREREATSKVEDANGMGSPLESDNS
AGRASKQVKGISLVLKQFHALLVKRFHHATRSHKDFLAQIVLPASFVLISLVFTMIVPPF
GEYPSLTLTPWMYGPQFTFISNEQPSHPKMKHFIQTLLKDPGMGTRCMANQPLENLFTCL
NTTSDWEVPPVSPEVTNILLSPAWDTRNPSPSCECSTDTKLTMLPVCAAGAGGLPPPQRK
EPTGDILLDMTNKNISDYLVKTYPTLIKTSLKSKYWVNEQRYGGLSVGGQLPILDVDPEM
IQNIFSQLGRMMNITGGPYSKSAMNELGTFLHYMESEYNVKVWYNNKGWHAMVSFMNIAN
NAILRAYLPPHANPSEYGITAINHPLNLTKEQLSEVTVLATSVDAVVAICVIFAMSFIPA
SFILYLIQERVTKAKHLQFVSGVSPVVYWVANFFWDMMNYSASTVMVVAIFVAFDKKCYT
SPTNLPALVALLCLYGWSVTPMMYPMSYMFNVPSTAYVSLSCINLFIGINSSAITFILEL
FENNRSLLMFNEVLKKVLLVFPHFCLGRGLIDMAMNQAVTDVYARFGEEFSMDPFRWDFV
GKNLFCMAVEGFVYFIFNLVIQYNFFLDLWVSDHVRNPVKDEDDDVAQERERIYKGGNKN
DILLVRDLSKTYRRRKRPAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVTSGE
ASVAGYSILTNILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGIPESEISRVAEWGI
QKLGLSEYAGNCAGTYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWTAILS
IIRDGRAVILTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGGGYVVTMKIKAAK
AGLTPDLVPAESFMDSSFPGCIQREKHYNTLQYEIAAASLARVFQLVLTNKERLNIEDYS
VSQTTLDQVFVSFAKQQSGEDDTVPPHLRASGSRREKKVSPLQRVVSKNR
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaagcagccagatccgtctgctgctctggaaaaactggacactccgcaagaga
caaaagattcgcttcctggttgagattctgtggcctgtggttttattcattggacttgtt
tggctacgaagagcaaatcccctgtatcgccaacatgaatgtcattttcccagcaaggct
atgccctcaacgggaatcctgccttggatccaagggattttctgcaatgctaataaccca
tgttttcgccatcaaactcgaggagagtcacctggggtcgtttccaactaccacaactcc
atactggcacggttttacatggattctcaggagctgatgttcaacgacactgagttccat
cagctcggtcgtctgtggcgtgaagtcactgtcatgagcaacttcatggagacgctgcgc
accaatcctgagctggtggcaggtaaaggactgaaagtggaagacattctgaaggacgac
gagactctaacatcattcctactgcgggacgttgggctttcagaagctgtggtgcatgat
cttacaaatgcgctagtgcgggtggagcaatttgcatatggcgtcccagatctgactctg
aaggagatcgcctgcagtcagactcttctggatcgatttctcatcttccccaaccgtgga
ttgtactgggtccacaatgccatgtgtgccctttcccagcagagactgcagaagatcgag
gatgtactttatgccaacatagacttcttcaagctcttccgactgttgcccgtggtgctg
gataatcacacgactgggatggacctgcagttctggggtcgagtgctttcagcagtgtcc
gacaagcttcaggagcttgtggggagacccagttcccaagacttgatgcgggtcatgtac
tccatcttccagcctgggggtccctcttccttcagtcagctgatgtccactgtgtcagat
ctgttctgcggataccctngaggcgagggcacccgggtcttctcttttaactggtatgag
gacaataactacaaggctttcctaggcatcaacagctccagagaacacgagagctacacg
tacgacaagacagcaactcctttctgtaatgcattgatgcagaacctggagtcgaaccct
attacgaaaatcgtgtggaattcagtgaagcctctggtgatggggaagatcctgtacacc
ccagactccccggctgtcagaaagatattaaagagtgctaacactacttttgaggagcta
gagaggttgaagaaaatggctaaggtctgggaagaggtgggaccacagctctgggagttc
tttcagaacagcgtccaaatgaacatgatacgggacacacttagaaaccccacagtgatg
gactttttggacaggcatcttaaagaaacagagttcactaccaaagacatccttaacttc
ctgcacaatggtccagaagaggagagatatatgaacatgaccaactttgactggagaaat
gtcttcagtctggctgatcaggctattcggatgttcaaccagtacagtgagtgtataagt
ctggataagtttgtgggtcacatggatgagaatctgatgacccatcaggctctgcacctg
ctggaggagaataagttctgggcgggtctggtcttcattgacatgtacccctggaccaca
gaactcccccgccatgtcaagttcaagatccgaatggacattgatgcagtggaacgtacc
aacaaaatcaaagacaggtactgggaccctggccccagggcagaccctctggaggatctt
cgctacatttggggaggttttgcctacctgcaggacatgattgaacatggtatcctaaag
ttacacacaggtcatgactggcctctaggtgtttacgtgcagcagatgccctacccctgc
tacgtggacgacatgttcatgctgaccctaaatcgctgtttccccatcttcatggtgctg
gcctggatctactctgtgtccatggtggtgaagagcatcgtgctggagaaggagatgagg
ctaaaggataccctgaaggccatgggcgtctctaatggagtcatctggtacacatggttt
atcgacagcttcctcatcatggctgtcagcactgctctgctgactgccattatcatggtt
ggaaaagtgctcaattacagcgatcccattatcctgttcctgtttctcctcacgttcact
gtggccactatcatgcagtgctttctgatgagtgtattcttcaataaggccaacctggct
gcggcttgcagcggcatcatctacttcaccctgtacctccctcacatcttctgtttcgcc
tggcaggaccgcattaccaagaatatgaagttagccgtgagctttctgtctccagtggcc
tttggttttgggacagagtatctatcccgctatgaggagcaaggcctgggtctgcagtgg
gacaatattggtacaagtcctctagagggtgatgagtactccttcttcacttctattcgg
atgatgctattggatgcagttctttatgctgttttggcttggtatctcgacaatgtcttt
ccaggccagtatggcatcggtcggccattttattttcctctacagccctcgtactgggtg
aagctgacaccttcaccctcacagaatccagatccaggccctgagaagcctctggtaaat
aacttggagaagcaggaggatgttgagcatgggggcctttcgccagagcacagggaatgc
aatggttcccgcagcagcaagaactgcaagcacaaggagaaacgagagaggatggagaag
gagagagagcgggaggagcagttaaaaacgcacgaagagattcaacaagaggagatccat
cctgtgcacaacggaaatccattttttgagccagagccagagggtctgttaataggagtc
tcagtacaggacttggtgaaggtgtattccaggaactcaagacctgcagtggactgtctc
agcatgaacttctatgaggaccagatcacttctttcctgggtcacaatggggctggaaag
accaccactttgtccatattgactgggttgtttccgcccacctctggaacggcttacgta
tatgggagggacattcgtacagaaatggacgccatacgacagtcgttgggcatgtgtcca
cagtacaacatcctcttcaaccatctgacagtagaggagcatattctcttctactctctg
atgaagggacgtgagcgcaaggaggccgagcaggaggttgaggacatgctggaggacctg
ggattgcctcataaacgagacgaggaagcacagaacctctctgggggtatgcagaggaag
ctgtcggtggcgatggctttcgtaggcggttctaaggtggtgatattggatgagccaacg
tcaggagttgatccatactccagacgctccatttgggacctgctactgaagtaccgcaca
ggccgcacagtaatactgtccactcatcacatggacgaggcagacctgttaagtgacaga
gtggccattatctctaaagggaaattacactgcagtggctctcctctctttctgaaaaac
tgctttggagtgggtttctacctcacgctggtgcgtcgcattaaagaccagcgcaaaaag
gagaatgaatgcgactgtgcatccgaatgttcctgcacctgctccacctgcactagatat
aaagaagagagtcaggcactacagcctgagagaacactggacgggaatgttgagagcatc
actactctgattcatcaccatgtacctgaggcgaagctgattgaaatgatcggtcaagag
atgacctatctgctcccaaataagggttttaaatatcgtgcatatgccagccttttccga
gaactggaggaaacattggctgacatgggcctcagtagctttggcatatctgacacatca
ctggaggagatctttctgaaagttacagcagatggagaggcagccaacagctctgttaca
ccagagcaatggatgctacaacagaggaaaaatggcaatggtttcttgagagaaagagag
gctacgagtaaagttgaagatgctaatggaatggggagcccactggagtctgacaacagt
gctggtagagcctccaagcaagttaaaggcattagcctggtactcaaacagttccacgct
cttctggtcaagagatttcaccatgccacacgcagccacaaagatttccttgcacagatt
gttttgccagccagttttgtccttatttctttggtcttcactatgattgtcccaccattt
ggagagtatcctagtctgaccctcactccatggatgtacggaccacagtttaccttcatc
agtaatgagcagccatcacacccaaaaatgaagcacttcatacagacgttgctgaaggac
cctggcatgggaacacgctgtatggcaaatcagcccttggagaacctcttcacctgctta
aacacaacctctgattgggaagttcctccagtgtctcctgaggtcacaaacatcttattg
agtcccgcatgggatacaagaaacccctccccttcctgtgagtgcagcactgatacaaag
ctcactatgctgcctgtctgtgcagctggagctggaggactgccaccaccacagagaaaa
gagccaacgggggacattttgctcgacatgacaaacaaaaacatctctgactacttagtg
aagacttaccccacgctcatcaagaccagcttgaagagcaaatattgggtgaatgaacaa
aggtatggtggactctctgttggtggacaactaccgattctcgatgtagaccctgagatg
atccagaacattttttcccagcttggacggatgatgaatattacagggggtccctattca
aagtcagccatgaatgaattaggaaccttcttgcactacatggagagtgaatacaatgtt
aaggtgtggtataataacaaaggctggcacgccatggtctccttcatgaacatagcaaac
aacgccattcttcgtgcttacctgccgcctcacgccaacccatcagaatacggcattact
gccatcaaccacccgctcaacctgaccaaagaacagctctcagaggtcactgttctcgcc
acatcagtggatgcagtggtggccatctgcgtcatctttgccatgtccttcatcccagcc
agctttatcctttacctcattcaggaacgtgtcaccaaggccaaacatctgcagtttgtt
agtggagtcagtcctgtggtctactgggtcgccaactttttctgggacatgatgaactac
tctgccagcacagtgatggttgtggccatttttgtggcttttgataagaagtgctacaca
tcacccacaaatctgccagcgctggtcgctctgctttgtctctatgggtggtcagtgacg
cccatgatgtaccccatgtcctacatgttcaatgtccccagcacggcgtacgtgtccctc
tcctgcatcaaccttttcattggtatcaacagtagcgccattaccttcatcttagagctc
tttgaaaacaacaggtctctactaatgtttaatgaggtgttgaagaaggtgctactggtc
ttccctcacttctgtctcggtcgaggtctcattgatatggccatgaaccaggccgtgact
gatgtctacgcccgatttggggaggagttttccatggatccgttcagatgggactttgtg
gggaagaatctcttctgtatggctgtggagggtttcgtgtatttcatctttaacctggtc
atccagtacaactttttccttgatctctgggtgtcagaccatgtgaggaatccagttaaa
gatgaagatgatgatgtagctcaggagagagagcgcatttacaaaggaggaaacaagaat
gacatccttctagttcgagacttgtcaaaaacatacaggcgcagaaaacgaccagcagtg
gacagaatctgcgtaggagttccagcgggggagtgttttgggcttcttggtgtaaacggt
gcaggtaaaaccacaacctttaaaatgctgaccggagacaccgatgtgacgtcaggggag
gcttcagtagctggatacagtattctcaccaacatactggatgtgcaccagaacatgggc
tactgtcctcagtttgatgccatagatgaactgctgacggggagggagcacctgtacctg
tacgcccgcctccgagggatccctgaatctgagattagcagagtggcagaatggggcatt
cagaagctgggtctgtctgaatatgccggaaactgtgctggtacctacagcgggggcaac
aagaggaagctgtctactgctattgctatgattggctgtcctcctctagtgctcctggat
gagcccaccacaggaatggaccctcactcccgccggttcctgtggaccgccattctgagt
atcatccgtgatgggagggcagtcattttgacgtcgcacagtatggaagaatgtgaagct
ctttgtactcgtttggccatcatggtcaacgggacgtttaagtgtctgggcacaatccag
catctgaaatacaagtttggaggtggctatgtagtcacgatgaagatcaaagctgcaaaa
gcaggcctgactcctgacctggtcccggctgagtccttcatggatagcagcttcccggga
tgtatacagcgagagaaacactacaacactttacaatatgaaatcgctgctgcctcactg
gcacgagtcttccagctggtgttgaccaacaaagagagactgaacattgaggactactct
gtgtctcagaccacattagaccaggtgttcgtgagttttgccaagcagcagtcaggagag
gatgatacagtcccccctcatctcagagcatcagggtcaagacgagagaaaaaggtctcg
ccactacaaagagtagtgtcaaaaaacagataa
DBGET
integrated database retrieval system
